pelp1 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Gene
Clones
gRNAs

Summary

Gene Symbol	pelp1
Entrez Gene ID	100169673
Full Name	proline, glutamate and leucine rich protein 1
Synonyms	hmx3,mnar,p160
General protein information	Preferred Names proline, glutamate and leucine rich protein 1 Names proline-, glutamic acid- and leucine-rich protein 1
Gene Type	protein-coding
Organism	Xenopus tropicalis(tropical clawed frog)

mRNA and Protein(s)

mRNA	Protein	Name
XM_031899491.1	XP_031755351.1	proline-, glutamic acid- and leucine-rich protein 1
XM_012953417.2	XP_012808871.1	proline-, glutamic acid- and leucine-rich protein 1

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T, Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P, Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH, Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW, Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW, Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U, Smailus DE, Schnerch A, Schein JE, Jones SJ, Marra MA,
Proceedings of the National Academy of Sciences of the United States of America99(26)16899-903(2002 Dec)

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following pelp1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the pelp1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OXa55439	XM_031899491.1 Latest version!	Xenopus tropicalis proline, glutamate and leucine rich protein 1 (pelp1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00
OXa32247	XM_012953417.2 Latest version!	Xenopus tropicalis proline, glutamate and leucine rich protein 1 (pelp1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$629.30 $899.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

pelp1 ( XM_031899491.1 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_031755351.1 Xenopus tropicalis proline, glutamate and leucine rich protein 1 (pelp1), mRNA.

Price & Availability↑

CloneID	OXa55439
Clone ID Related Accession (Same CDS sequence)	XM_031899491.1
Accession Version	XM_031899491.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3057bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-17
Organism	Xenopus tropicalis(tropical clawed frog)
Product	proline-, glutamic acid- and leucine-rich protein 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGGCCG TGTGTGTCGG GACCCGGGGG ATGGAGGTGA CAATTACCGG CCTTCTGGAG 
CGGGATCTGA GCGAAGGGGA ACTGGCTGAA ACCATCCGGG GGCTGCGGGA GCATGGGGCC 
CTCCGGGGGG AGGGTCTCCC GGCTGCCATG TCTGGTCTCC TCAGTAGCTG CAACTCTCGC 
CTGATCTCGG CCGGCACTCG GGTTGAGGGG CTGTCTCTGT TGGCTCTGGC AGTGGAAGAG 
TCCCCCACGG GTGTTTTTGA GCAGCACTGC GTGTCCTGGC TGCGCAGCAT CCTGCAGATT 
ATCCAGTCTC AGGACCCCCC ACGTGTGGTC AGTTTGGCTG TCTTTGTCTT GCGCTCCCTT 
CTTGCTCACT CCTCTGCGCT GCCAGAGTTA TCCCGGGAAA TCTCCACCAA TCACATCCCA 
GGTCTGCTCA CCTCTCTGCT GGGCCTGAGG CGCCAGTGCC TGGTTCCAGC CTTAGAGGGG 
ATCCGATCCT GCTTCATCTC CTACCCCAGA GCCTGCGGCT CCTTACGGGG GAAACTCACT 
GCTTTCCTTC TGAGCCTCAT AGATGCAGAA AACCAGCAAA TTCAGGAGGT TGCCTGTCAG 
TGCTACTCGC TGCTCCCATC CCTCGGCTCT GGCTTCTCTC AGGGGATCAA ACACACGGAG 
AACTGGGAGA GGCAAATCCA AAGTGTCATT TGCTCCCTGC ACACTGTATT CCTGCAGCTG 
TACCAAGGCT CCGAAACGGA CACGGCACGC TACGAGGGCT CCGGCACTGA GCTGGAGCTC 
CCCCCTGTGG AAGATGATGG AACTCACAGT GTGCTGCAGC TGGCACGAAG GTTCACAGCC 
CTGGCCCAGT GTATGCGCCT GCTGCTCAGG GAACAGTTTC CAGCTCCTGT GCGGGTCCCA 
GTGTCCGACG TTCTCAGTCT GGTCTGCAGG GTGGTCAACG TGAGCCCAAA AAACCTGAGC 
TGGCACGGAG AGGAATCGCT GAAGTTGCTC CTCCTCCCGC GGATGCACAG CAGCGTCCTG 
GAAATCCTGG AGGCGACAAT GATAGCGTGT GGCCCTCGGC TCCTTCCCTT CTCGGCAGTG 
ATCTGCAGGC TCTTTCCTCA GCTCCTACTT TCCTGGGCAG CAGTGAAGGG CATGGCTGGC 
ATCCCCTCGG GCCAGGAGAG GCCATACAGC TCCCTCCGTT GTTCCGTGTA CCGAGTGCTG 
GAAACGTGGG TAACGATGTG CGGCATCTCC TCCGGAGTCT TGCAAGGGCC AACGCATCAC 
TCCGACATCC TATTGGCCAA TCTGTTAAGT GACATCACTC CACCCACAGA CGCCATTAAG 
ATGTCCTCGT TTGTGCAGCT CGGAGCAAAG AAGCAGAAAG TGTCGGAGGT CGGGGGCGAT 
GATTTCCAGA GTCACCGCAA GAGAGACACC ACTGCCAATG TTGAGCTGTG CACAGCGGCT 
CTTAAAGGGC TGTGCTGTGT GGTTCTTCAC TGTGGGTCAG TAATCAAGGA AGATGTTCAT 
AGGAGACTCC AAGAGCTCTC CATCCCACTG CTGCTTCGCC TCCAACAGGG GCCTGACCAG 
TGGTTGGGTC CGTATACCAG CAGTGAGTGT CGGAAGGAAC TGTACAGACT TCTCCTGTGT 
TTGACTCTGA CCCCCAACCC CAGGCTTCCT GCTCCTCTGC ACTGCGCCAT CAAGATCTTC 
AGAGTGGGAA TCTCGGAGGA GAGTTTGCAG GTCTCCAGAT TCTCCACCGA GGCACTCGCC 
ATTTGTCGCA TCCTCATCCA TCCCCGTGTT CCCTCTCTCC AACGTCCTCT GCCACATCAC 
GGGCCTCGAC CTCCTCTCCA GTCAGACGCC CCCACTCTTC GGCCTCCTGC TCCACCACCT 
ACCTTTCCTG CTATGCCTCC AGCCAATCAC CTTCCTCCTA GGCCCACGGT ACAAGTCATG 
GCCACTGAGC CTCCTGTTTC CGCCGCAGTG CCATCTCCTC CTCCTGAAGA ATCATTTGGG 
GAGAAGCCTC GACGTGCCGT CTTCATTCAT TTCGACAAGG AGGAGCCCTC CGACGTAGAG 
ATTTCCTTGG AGAGCGACTC CGATGACAGT GTGGTCATTG TACCCGAAGG GCTTTTCGCA 
AAATCCGACT CCAAACCAGA ACCCTCTCCG CCAACTGTAA AACCTACAGA AGAAGCGACT 
GAACCAGTAG CCCAGCCTGC TGTCCCCTCC TCCAGCACCG CCCCGCCCCC TCCTCCTCCT 
CCTCCACCAG CACCACCAGT ATGCGCTGGG CCTTCCTCTG TCCCAGTCCC CATTGCAGAG 
GCCCCGCCTC CTCCTCCCCC CCAACAAGAG GTAGACACAG TCATCAACAT CAACAGCAGC 
GACGATGAAG AGGATGGAGA GGAGGATGAG GATGAAGGCT TATACGACGA TGAGGATGAG 
GAAGATTATT ATGATGAAGA GGAAGACGAA GATTTAGAGG GTCTGGAAGA AGATGATTAC 
GAAGAGGATG AGGAAGGCAT AACAGAAGAA GAGGAAGAAG ATCTGGAAGA AGGAGAAGAG 
GATGAAGAAG AGGGAGAGGA TGAGGAATGC TTGATGCCAG ATGAGTTGCC AGTTGGCTGT 
GTGGCGGAGG AGATTCCTGA CGGAACAGAG ACCAGTTCCT TGCATGAGGT AGACCCTGAC 
GAAGGCCCAC CGCGCCTGTC CCCGGTACAG GAGGACGAAG TAGCGGACAC CGGCTTGTTA 
ATGCTCGTGG AGAGCGAAGA CAGAGAGCGC TCTAGGGACT CCCACGAGGA AAGCGCCCCA 
GAAACCGACC TCGCCAGAAG CCCCCCTCAG CCTCCAGTTC TCACACCTCC ACCCCCACTA 
GAAGAGCCGC CACCAATGGA AGAAGGCGAC GCGCCCCAAC TGGAAGTGCC GGAGCTTGAA 
GCGCCCCCTA TTGCCCCGGA ACCAGAGAAA GAAATCGAAG AGAGAAAGCC AGATGAGGTG 
CACGTTGAGA AGCCTGAACC AGAGGAAGAG GAGCCAATGG CCGACGCAGA CACCATGCTG 
GCCGACTTTG TCGACTGCCC CCCAGATGAC GACAAGCTGC CCGAGCCTTG CACGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_031755351.1
CDS	108..3164
Translation	MAAVCVGTRGMEVTITGLLERDLSEGELAETIRGLREHGALRGEGLPAAMSGLLSSCNSRLISAGTRVEGLSLLALAVEESPTGVFEQHCVSWLRSILQIIQSQDPPRVVSLAVFVLRSLLAHSSALPELSREISTNHIPGLLTSLLGLRRQCLVPALEGIRSCFISYPRACGSLRGKLTAFLLSLIDAENQQIQEVACQCYSLLPSLGSGFSQGIKHTENWERQIQSVICSLHTVFLQLYQGSETDTARYEGSGTELELPPVEDDGTHSVLQLARRFTALAQCMRLLLREQFPAPVRVPVSDVLSLVCRVVNVSPKNLSWHGEESLKLLLLPRMHSSVLEILEATMIACGPRLLPFSAVICRLFPQLLLSWAAVKGMAGIPSGQERPYSSLRCSVYRVLETWVTMCGISSGVLQGPTHHSDILLANLLSDITPPTDAIKMSSFVQLGAKKQKVSEVGGDDFQSHRKRDTTANVELCTAALKGLCCVVLHCGSVIKEDVHRRLQELSIPLLLRLQQGPDQWLGPYTSSECRKELYRLLLCLTLTPNPRLPAPLHCAIKIFRVGISEESLQVSRFSTEALAICRILIHPRVPSLQRPLPHHGPRPPLQSDAPTLRPPAPPPTFPAMPPANHLPPRPTVQVMATEPPVSAAVPSPPPEESFGEKPRRAVFIHFDKEEPSDVEISLESDSDDSVVIVPEGLFAKSDSKPEPSPPTVKPTEEATEPVAQPAVPSSSTAPPPPPPPPPAPPVCAGPSSVPVPIAEAPPPPPPQQEVDTVININSSDDEEDGEEDEDEGLYDDEDEEDYYDEEEDEDLEGLEEDDYEEDEEGITEEEEEDLEEGEEDEEEGEDEECLMPDELPVGCVAEEIPDGTETSSLHEVDPDEGPPRLSPVQEDEVADTGLLMLVESEDRERSRDSHEESAPETDLARSPPQPPVLTPPPPLEEPPPMEEGDAPQLEVPELEAPPIAPEPEKEIEERKPDEVHVEKPEPEEEEPMADADTMLADFVDCPPDDDKLPEPCT

Target ORF information:

RefSeq Version	XM_031899491.1
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis proline, glutamate and leucine rich protein 1 (pelp1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_031899491.1

ORF Insert Sequence:

ATGGCGGCCG TGTGTGTCGG GACCCGGGGG ATGGAGGTGA CAATTACCGG CCTTCTGGAG 
CGGGATCTGA GCGAAGGGGA ACTGGCTGAA ACCATCCGGG GGCTGCGGGA GCATGGGGCC 
CTCCGGGGGG AGGGTCTCCC GGCTGCCATG TCTGGTCTCC TCAGTAGCTG CAACTCTCGC 
CTGATCTCGG CCGGCACTCG GGTTGAGGGG CTGTCTCTGT TGGCTCTGGC AGTGGAAGAG 
TCCCCCACGG GTGTTTTTGA GCAGCACTGC GTGTCCTGGC TGCGCAGCAT CCTGCAGATT 
ATCCAGTCTC AGGACCCCCC ACGTGTGGTC AGTTTGGCTG TCTTTGTCTT GCGCTCCCTT 
CTTGCTCACT CCTCTGCGCT GCCAGAGTTA TCCCGGGAAA TCTCCACCAA TCACATCCCA 
GGTCTGCTCA CCTCTCTGCT GGGCCTGAGG CGCCAGTGCC TGGTTCCAGC CTTAGAGGGG 
ATCCGATCCT GCTTCATCTC CTACCCCAGA GCCTGCGGCT CCTTACGGGG GAAACTCACT 
GCTTTCCTTC TGAGCCTCAT AGATGCAGAA AACCAGCAAA TTCAGGAGGT TGCCTGTCAG 
TGCTACTCGC TGCTCCCATC CCTCGGCTCT GGCTTCTCTC AGGGGATCAA ACACACGGAG 
AACTGGGAGA GGCAAATCCA AAGTGTCATT TGCTCCCTGC ACACTGTATT CCTGCAGCTG 
TACCAAGGCT CCGAAACGGA CACGGCACGC TACGAGGGCT CCGGCACTGA GCTGGAGCTC 
CCCCCTGTGG AAGATGATGG AACTCACAGT GTGCTGCAGC TGGCACGAAG GTTCACAGCC 
CTGGCCCAGT GTATGCGCCT GCTGCTCAGG GAACAGTTTC CAGCTCCTGT GCGGGTCCCA 
GTGTCCGACG TTCTCAGTCT GGTCTGCAGG GTGGTCAACG TGAGCCCAAA AAACCTGAGC 
TGGCACGGAG AGGAATCGCT GAAGTTGCTC CTCCTCCCGC GGATGCACAG CAGCGTCCTG 
GAAATCCTGG AGGCGACAAT GATAGCGTGT GGCCCTCGGC TCCTTCCCTT CTCGGCAGTG 
ATCTGCAGGC TCTTTCCTCA GCTCCTACTT TCCTGGGCAG CAGTGAAGGG CATGGCTGGC 
ATCCCCTCGG GCCAGGAGAG GCCATACAGC TCCCTCCGTT GTTCCGTGTA CCGAGTGCTG 
GAAACGTGGG TAACGATGTG CGGCATCTCC TCCGGAGTCT TGCAAGGGCC AACGCATCAC 
TCCGACATCC TATTGGCCAA TCTGTTAAGT GACATCACTC CACCCACAGA CGCCATTAAG 
ATGTCCTCGT TTGTGCAGCT CGGAGCAAAG AAGCAGAAAG TGTCGGAGGT CGGGGGCGAT 
GATTTCCAGA GTCACCGCAA GAGAGACACC ACTGCCAATG TTGAGCTGTG CACAGCGGCT 
CTTAAAGGGC TGTGCTGTGT GGTTCTTCAC TGTGGGTCAG TAATCAAGGA AGATGTTCAT 
AGGAGACTCC AAGAGCTCTC CATCCCACTG CTGCTTCGCC TCCAACAGGG GCCTGACCAG 
TGGTTGGGTC CGTATACCAG CAGTGAGTGT CGGAAGGAAC TGTACAGACT TCTCCTGTGT 
TTGACTCTGA CCCCCAACCC CAGGCTTCCT GCTCCTCTGC ACTGCGCCAT CAAGATCTTC 
AGAGTGGGAA TCTCGGAGGA GAGTTTGCAG GTCTCCAGAT TCTCCACCGA GGCACTCGCC 
ATTTGTCGCA TCCTCATCCA TCCCCGTGTT CCCTCTCTCC AACGTCCTCT GCCACATCAC 
GGGCCTCGAC CTCCTCTCCA GTCAGACGCC CCCACTCTTC GGCCTCCTGC TCCACCACCT 
ACCTTTCCTG CTATGCCTCC AGCCAATCAC CTTCCTCCTA GGCCCACGGT ACAAGTCATG 
GCCACTGAGC CTCCTGTTTC CGCCGCAGTG CCATCTCCTC CTCCTGAAGA ATCATTTGGG 
GAGAAGCCTC GACGTGCCGT CTTCATTCAT TTCGACAAGG AGGAGCCCTC CGACGTAGAG 
ATTTCCTTGG AGAGCGACTC CGATGACAGT GTGGTCATTG TACCCGAAGG GCTTTTCGCA 
AAATCCGACT CCAAACCAGA ACCCTCTCCG CCAACTGTAA AACCTACAGA AGAAGCGACT 
GAACCAGTAG CCCAGCCTGC TGTCCCCTCC TCCAGCACCG CCCCGCCCCC TCCTCCTCCT 
CCTCCACCAG CACCACCAGT ATGCGCTGGG CCTTCCTCTG TCCCAGTCCC CATTGCAGAG 
GCCCCGCCTC CTCCTCCCCC CCAACAAGAG GTAGACACAG TCATCAACAT CAACAGCAGC 
GACGATGAAG AGGATGGAGA GGAGGATGAG GATGAAGGCT TATACGACGA TGAGGATGAG 
GAAGATTATT ATGATGAAGA GGAAGACGAA GATTTAGAGG GTCTGGAAGA AGATGATTAC 
GAAGAGGATG AGGAAGGCAT AACAGAAGAA GAGGAAGAAG ATCTGGAAGA AGGAGAAGAG 
GATGAAGAAG AGGGAGAGGA TGAGGAATGC TTGATGCCAG ATGAGTTGCC AGTTGGCTGT 
GTGGCGGAGG AGATTCCTGA CGGAACAGAG ACCAGTTCCT TGCATGAGGT AGACCCTGAC 
GAAGGCCCAC CGCGCCTGTC CCCGGTACAG GAGGACGAAG TAGCGGACAC CGGCTTGTTA 
ATGCTCGTGG AGAGCGAAGA CAGAGAGCGC TCTAGGGACT CCCACGAGGA AAGCGCCCCA 
GAAACCGACC TCGCCAGAAG CCCCCCTCAG CCTCCAGTTC TCACACCTCC ACCCCCACTA 
GAAGAGCCGC CACCAATGGA AGAAGGCGAC GCGCCCCAAC TGGAAGTGCC GGAGCTTGAA 
GCGCCCCCTA TTGCCCCGGA ACCAGAGAAA GAAATCGAAG AGAGAAAGCC AGATGAGGTG 
CACGTTGAGA AGCCTGAACC AGAGGAAGAG GAGCCAATGG CCGACGCAGA CACCATGCTG 
GCCGACTTTG TCGACTGCCC CCCAGATGAC GACAAGCTGC CCGAGCCTTG CACGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

pelp1 ( XM_012953417.2 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_012808871.1 Xenopus tropicalis proline, glutamate and leucine rich protein 1 (pelp1), mRNA.

Price & Availability↑

CloneID	OXa32247
Clone ID Related Accession (Same CDS sequence)	XM_012953417.2
Accession Version	XM_012953417.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3057bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-07
Organism	Xenopus tropicalis(tropical clawed frog)
Product	proline-, glutamic acid- and leucine-rich protein 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.1) and transcript sequence (BC166379.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012953417.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 831 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGGCGGCCG TGTGTGTCGG GACCCGGGGG ATGGAGGTGA CAATTACCGG CCTTCTGGAG 
CGGGATCTGA GCGAAGGGGA ACTGGCTGAA ACCATCCGGG GGCTGCGGGA GCATGGGGCC 
CTCCGGGGGG AGGGACTCCC GGCTGCCATG TCTGGTCTCC TCAGTAGCTG CAACTCTCGC 
CTGATCTCAG CCAGCACTCG GGTTGAGGGG CTGTCTCTGT TGGCTCTGGC AGTGGAAGAG 
TCCCCCACGG GTGTTTTTGA GCAGCACTGT GTGTCCTGGC TGCGCAGCAT CCTGCAGATT 
ATCCAGTCTC AGGACCCCCC ACGTGTGGTC AGTTTGGCTG TCTTTGTCTT GCGCTCCCTT 
CTTGCTCACT CCTCTGCGCT GCCAGAGTTA TCCCGGGAAA TCTCCACCAA TCACATCCCA 
GGTCTGCTCA CCTCTCTGCT GGGCCTGAGG CGCCAGTGCC TGGTTCCAGC TTTAGAGGGG 
ATCCGATCCT GCTTCATCTC CTACCCCAGA GCCTGCGGCT CCTTACGGGG GAAACTCACT 
GCTTTCCTTC TGAGCCTCAT AGATGCAGAA AACCAGCAAA TTCAAGAGGT CGCCTGTCAG 
TGCTACTCGC TCCTCCCATC CCTCGGCTCT GGCTTCTCTC AGGGGATCAA ACACACGGAG 
AACTGGGAGA GGCAAATCCA AAGTGTCATT TGCTCCCTGC ACACTGTATT CCTGCAGCTG 
TACCAAGGCT CCGAAACGGA CACGGCACGC TACGAGGGCT CCGGCACTGA GCTGGAGCTC 
CCCCCTGTGG AAGATGATGG AACTCACAGT GTGCTGCAGC TGGCACGAAG GTTCACAGCC 
CTGGCCCAGT GTATGCGCCT GCTGCTCAGG GAACAGTTTC CAGCTCCTGT GCGGGTCCCA 
GTGTCCGACG TTCTCAGTCT GGTCTGCAGG GTGGTCAACG TGAGCCCAAA AAACCTGAGC 
TGGCATGGAG AGGAATCGCT GAAGTTGCTC CTCCTCCCGC GGATGCACAG CAGCGTCCTG 
GAAATCCTGG AGGCGACAAT GATAGCGTGT GGCCCTCGGC TCCTTCCCTT CTCGGCAGTG 
ATCTGCAGGC TCTTTCCTCA GCTCCTACTT TCCTGGGCAG CAGTGAAGGG CATGGCTGGC 
ATCCCCTCGG GCCAGGAGAG GCCATACAGC TCCCTCCGTT GTTCCGTGTA CCGAGTGCTG 
GAAACGTGGG TAACGATGTG CGGCATCTCC TCCGGAGTCT TGCAAGGGCC GACGCATCAC 
TCCGACATCC TATTGGCCAA TCTGTTAAGT GACATCACTC CACCCACAGA CGCCATTAAG 
ATGTCCTCGT TTGTGCAGCT CGGAGCAAAG AAGCAGAAAG TGTCGGAGGT CGGGGGCGAT 
GATTTCCAGA GTCACCGCAA GAGAGACACC ACTGCCAATG TTGAGCTGTG CACAGCGGCT 
CTTAAAGGGC TGTGCTGTGT GGTTCTTCAC TGTGGGTCAG TAATCAAGGA AGATGTTCAT 
AGGAGACTCC AAGAGCTCTC CATCCCACTG CTGCTTCGCC TCCAACAGGG GCCTGACCAG 
TGGTTGGGTC CGTATACCAG CAGTGAGTGT CGGAAGGAAC TGTACAGACT TCTCCTGTGT 
TTGACTCTGA CCCCCAACCC CAGGCTTCCT GCTCCTCTGC ACTGCGCCAT CAAGATCTTC 
AGAGTGGGAA TCTCGGAGGA GAGTTTGCAG GTCTCCAGAT TCTCCACCGA GGCACTCGCC 
ATTTGTCGCA TCCTCATCCA TCCCCGTGTT CCCTCTCTCC AACGTCCTCT GCCACATCAC 
GGGCCTCGAC CTCCTCTCCA GTCAGACGCC CCCACTCTTC GGCCTCCTGC TCCACCACCT 
ACCTTTCCTG CTATGCCTCC AGCCAATCAC CTTCCTCCTA GGCCCACGGT ACAAGTCATG 
GCCACTGAGC CTCCTGTTTC CGCCGCAGTG CCATCTCCTC CTCCTGAAGA ATCATTTGGG 
GAGAAGCCTC GACGTGCCGT CTTCATTCAT TTCGACAAGG AGGAGCCCTC CGACGTAGAG 
ATTTCCTTGG AGAGCGACTC CGATGACAGT GTGGTCATTG TACCCGAAGG GCTTTTCGCA 
AAATCCGACT CCAAACCAGA ACCCTCTCCG CCAACTGTAA AACCTACAGA AGAAGCGACT 
GAACCAGTAG CCCAGCCTGC TGTCCCCTCC TCCAGCACCG CCCCGCCCCC TCCTCCTCCT 
CCTCCACCAG CACCACCAGT ATGCGCTGGG CCTTCCTCTG TCCCAGTCCC CATTGCAGAG 
GCCCCGCCTC CTCCTCCCCC CCAACAAGAG GTAGACACAG TCATCAACAT CAACAGCAGC 
GACGATGAAG AGGATGGAGA GGAGGATGAG GATGAAGGCT TATACGACGA TGAGGATGAG 
GAAGATTATT ATGATGAAGA GGAAGACGAA GATTTAGAGG GTCTGGAAGA AGATGATTAC 
GAAGAGGATG AGGAAGGCAT AACAGAAGAA GAGGAAGAAG ATCTGGAAGA AGGAGAAGAG 
GATGAAGAAG AGGGAGAGGA TGAGGAATGC TTGATGCCAG ATGAGTTGCC AGTTGGCTGT 
GTGGCGGAGG AGATTCCTGA CGGAACAGAG ACCAGTTCCT TGCATGAGGT AGACCCTGAC 
GAAGGCCCAC CGCGCCTGTC CCCGGTACAG GAGGACGAAG TAGCGGACAC CGGCTTGTTA 
ATGCTCGTGG AGAGCGAAGA CAGAGAGCGC TCTAGGGACT CCCACGAGGA AAGCGCCCCA 
GAAACCGACC TCGCCAGAAG CCCCCCTCAG CCTCCAGTTC TCACACCTCC ACCCCCACTA 
GAAGAGCCGC CACCAATGGA AGAAGGCGAC GCGCCCCAAC TGGAAGTGCC GGAGCTTGAA 
GCGCCCCCTA TTGCCCCGGA ACCAGAGAAA GAAATCGAAG AGAGAAAGCC AGATGAGGTG 
CACGTTGAGA AGCCTGAACC AGAGGAAGAG GAGCCAATGG CCGACGCAGA CACCATGCTG 
GCCGACTTTG TCGACTGCCC CCCAGATGAC GACAAGCTGC CCGAGCCTTG CACGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012808871.1
CDS	87..3143
Translation	MAAVCVGTRGMEVTITGLLERDLSEGELAETIRGLREHGALRGEGLPAAMSGLLSSCNSRLISASTRVEGLSLLALAVEESPTGVFEQHCVSWLRSILQIIQSQDPPRVVSLAVFVLRSLLAHSSALPELSREISTNHIPGLLTSLLGLRRQCLVPALEGIRSCFISYPRACGSLRGKLTAFLLSLIDAENQQIQEVACQCYSLLPSLGSGFSQGIKHTENWERQIQSVICSLHTVFLQLYQGSETDTARYEGSGTELELPPVEDDGTHSVLQLARRFTALAQCMRLLLREQFPAPVRVPVSDVLSLVCRVVNVSPKNLSWHGEESLKLLLLPRMHSSVLEILEATMIACGPRLLPFSAVICRLFPQLLLSWAAVKGMAGIPSGQERPYSSLRCSVYRVLETWVTMCGISSGVLQGPTHHSDILLANLLSDITPPTDAIKMSSFVQLGAKKQKVSEVGGDDFQSHRKRDTTANVELCTAALKGLCCVVLHCGSVIKEDVHRRLQELSIPLLLRLQQGPDQWLGPYTSSECRKELYRLLLCLTLTPNPRLPAPLHCAIKIFRVGISEESLQVSRFSTEALAICRILIHPRVPSLQRPLPHHGPRPPLQSDAPTLRPPAPPPTFPAMPPANHLPPRPTVQVMATEPPVSAAVPSPPPEESFGEKPRRAVFIHFDKEEPSDVEISLESDSDDSVVIVPEGLFAKSDSKPEPSPPTVKPTEEATEPVAQPAVPSSSTAPPPPPPPPPAPPVCAGPSSVPVPIAEAPPPPPPQQEVDTVININSSDDEEDGEEDEDEGLYDDEDEEDYYDEEEDEDLEGLEEDDYEEDEEGITEEEEEDLEEGEEDEEEGEDEECLMPDELPVGCVAEEIPDGTETSSLHEVDPDEGPPRLSPVQEDEVADTGLLMLVESEDRERSRDSHEESAPETDLARSPPQPPVLTPPPPLEEPPPMEEGDAPQLEVPELEAPPIAPEPEKEIEERKPDEVHVEKPEPEEEEPMADADTMLADFVDCPPDDDKLPEPCT

Target ORF information:

RefSeq Version	XM_012953417.2
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis proline, glutamate and leucine rich protein 1 (pelp1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012953417.2

ORF Insert Sequence:

ATGGCGGCCG TGTGTGTCGG GACCCGGGGG ATGGAGGTGA CAATTACCGG CCTTCTGGAG 
CGGGATCTGA GCGAAGGGGA ACTGGCTGAA ACCATCCGGG GGCTGCGGGA GCATGGGGCC 
CTCCGGGGGG AGGGACTCCC GGCTGCCATG TCTGGTCTCC TCAGTAGCTG CAACTCTCGC 
CTGATCTCAG CCAGCACTCG GGTTGAGGGG CTGTCTCTGT TGGCTCTGGC AGTGGAAGAG 
TCCCCCACGG GTGTTTTTGA GCAGCACTGT GTGTCCTGGC TGCGCAGCAT CCTGCAGATT 
ATCCAGTCTC AGGACCCCCC ACGTGTGGTC AGTTTGGCTG TCTTTGTCTT GCGCTCCCTT 
CTTGCTCACT CCTCTGCGCT GCCAGAGTTA TCCCGGGAAA TCTCCACCAA TCACATCCCA 
GGTCTGCTCA CCTCTCTGCT GGGCCTGAGG CGCCAGTGCC TGGTTCCAGC TTTAGAGGGG 
ATCCGATCCT GCTTCATCTC CTACCCCAGA GCCTGCGGCT CCTTACGGGG GAAACTCACT 
GCTTTCCTTC TGAGCCTCAT AGATGCAGAA AACCAGCAAA TTCAAGAGGT CGCCTGTCAG 
TGCTACTCGC TCCTCCCATC CCTCGGCTCT GGCTTCTCTC AGGGGATCAA ACACACGGAG 
AACTGGGAGA GGCAAATCCA AAGTGTCATT TGCTCCCTGC ACACTGTATT CCTGCAGCTG 
TACCAAGGCT CCGAAACGGA CACGGCACGC TACGAGGGCT CCGGCACTGA GCTGGAGCTC 
CCCCCTGTGG AAGATGATGG AACTCACAGT GTGCTGCAGC TGGCACGAAG GTTCACAGCC 
CTGGCCCAGT GTATGCGCCT GCTGCTCAGG GAACAGTTTC CAGCTCCTGT GCGGGTCCCA 
GTGTCCGACG TTCTCAGTCT GGTCTGCAGG GTGGTCAACG TGAGCCCAAA AAACCTGAGC 
TGGCATGGAG AGGAATCGCT GAAGTTGCTC CTCCTCCCGC GGATGCACAG CAGCGTCCTG 
GAAATCCTGG AGGCGACAAT GATAGCGTGT GGCCCTCGGC TCCTTCCCTT CTCGGCAGTG 
ATCTGCAGGC TCTTTCCTCA GCTCCTACTT TCCTGGGCAG CAGTGAAGGG CATGGCTGGC 
ATCCCCTCGG GCCAGGAGAG GCCATACAGC TCCCTCCGTT GTTCCGTGTA CCGAGTGCTG 
GAAACGTGGG TAACGATGTG CGGCATCTCC TCCGGAGTCT TGCAAGGGCC GACGCATCAC 
TCCGACATCC TATTGGCCAA TCTGTTAAGT GACATCACTC CACCCACAGA CGCCATTAAG 
ATGTCCTCGT TTGTGCAGCT CGGAGCAAAG AAGCAGAAAG TGTCGGAGGT CGGGGGCGAT 
GATTTCCAGA GTCACCGCAA GAGAGACACC ACTGCCAATG TTGAGCTGTG CACAGCGGCT 
CTTAAAGGGC TGTGCTGTGT GGTTCTTCAC TGTGGGTCAG TAATCAAGGA AGATGTTCAT 
AGGAGACTCC AAGAGCTCTC CATCCCACTG CTGCTTCGCC TCCAACAGGG GCCTGACCAG 
TGGTTGGGTC CGTATACCAG CAGTGAGTGT CGGAAGGAAC TGTACAGACT TCTCCTGTGT 
TTGACTCTGA CCCCCAACCC CAGGCTTCCT GCTCCTCTGC ACTGCGCCAT CAAGATCTTC 
AGAGTGGGAA TCTCGGAGGA GAGTTTGCAG GTCTCCAGAT TCTCCACCGA GGCACTCGCC 
ATTTGTCGCA TCCTCATCCA TCCCCGTGTT CCCTCTCTCC AACGTCCTCT GCCACATCAC 
GGGCCTCGAC CTCCTCTCCA GTCAGACGCC CCCACTCTTC GGCCTCCTGC TCCACCACCT 
ACCTTTCCTG CTATGCCTCC AGCCAATCAC CTTCCTCCTA GGCCCACGGT ACAAGTCATG 
GCCACTGAGC CTCCTGTTTC CGCCGCAGTG CCATCTCCTC CTCCTGAAGA ATCATTTGGG 
GAGAAGCCTC GACGTGCCGT CTTCATTCAT TTCGACAAGG AGGAGCCCTC CGACGTAGAG 
ATTTCCTTGG AGAGCGACTC CGATGACAGT GTGGTCATTG TACCCGAAGG GCTTTTCGCA 
AAATCCGACT CCAAACCAGA ACCCTCTCCG CCAACTGTAA AACCTACAGA AGAAGCGACT 
GAACCAGTAG CCCAGCCTGC TGTCCCCTCC TCCAGCACCG CCCCGCCCCC TCCTCCTCCT 
CCTCCACCAG CACCACCAGT ATGCGCTGGG CCTTCCTCTG TCCCAGTCCC CATTGCAGAG 
GCCCCGCCTC CTCCTCCCCC CCAACAAGAG GTAGACACAG TCATCAACAT CAACAGCAGC 
GACGATGAAG AGGATGGAGA GGAGGATGAG GATGAAGGCT TATACGACGA TGAGGATGAG 
GAAGATTATT ATGATGAAGA GGAAGACGAA GATTTAGAGG GTCTGGAAGA AGATGATTAC 
GAAGAGGATG AGGAAGGCAT AACAGAAGAA GAGGAAGAAG ATCTGGAAGA AGGAGAAGAG 
GATGAAGAAG AGGGAGAGGA TGAGGAATGC TTGATGCCAG ATGAGTTGCC AGTTGGCTGT 
GTGGCGGAGG AGATTCCTGA CGGAACAGAG ACCAGTTCCT TGCATGAGGT AGACCCTGAC 
GAAGGCCCAC CGCGCCTGTC CCCGGTACAG GAGGACGAAG TAGCGGACAC CGGCTTGTTA 
ATGCTCGTGG AGAGCGAAGA CAGAGAGCGC TCTAGGGACT CCCACGAGGA AAGCGCCCCA 
GAAACCGACC TCGCCAGAAG CCCCCCTCAG CCTCCAGTTC TCACACCTCC ACCCCCACTA 
GAAGAGCCGC CACCAATGGA AGAAGGCGAC GCGCCCCAAC TGGAAGTGCC GGAGCTTGAA 
GCGCCCCCTA TTGCCCCGGA ACCAGAGAAA GAAATCGAAG AGAGAAAGCC AGATGAGGTG 
CACGTTGAGA AGCCTGAACC AGAGGAAGAG GAGCCAATGG CCGACGCAGA CACCATGCTG 
GCCGACTTTG TCGACTGCCC CCCAGATGAC GACAAGCTGC CCGAGCCTTG CACGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
Proceedings of the National Academy of Sciences of the United States of America99(26)16899-903(2002 Dec)
Strausberg RL,Feingold EA,Grouse LH,Derge JG,Klausner RD,Collins FS,Wagner L,Shenmen CM,Schuler GD,Altschul SF,Zeeberg B,Buetow KH,Schaefer CF,Bhat NK,Hopkins RF,Jordan H,Moore T,Max SI,Wang J,Hsieh F,Diatchenko L,Marusina K,Farmer AA,Rubin GM,Hong L,Stapleton M,Soares MB,Bonaldo MF,Casavant TL,Scheetz TE,Brownstein MJ,Usdin TB,Toshiyuki S,Carninci P,Prange C,Raha SS,Loquellano NA,Peters GJ,Abramson RD,Mullahy SJ,Bosak SA,McEwan PJ,McKernan KJ,Malek JA,Gunaratne PH,Richards S,Worley KC,Hale S,Garcia AM,Gay LJ,Hulyk SW,Villalon DK,Muzny DM,Sodergren EJ,Lu X,Gibbs RA,Fahey J,Helton E,Ketteman M,Madan A,Rodrigues S,Sanchez A,Whiting M,Madan A,Young AC,Shevchenko Y,Bouffard GG,Blakesley RW,Touchman JW,Green ED,Dickson MC,Rodriguez AC,Grimwood J,Schmutz J,Myers RM,Butterfield YS,Krzywinski MI,Skalska U,Smailus DE,Schnerch A,Schein JE,Jones SJ,Marra MA,

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
Klein SL,Strausberg RL,Wagner L,Pontius J,Clifton SW,Richardson P

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pelp1 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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