sox21a cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	sox21a
Entrez Gene ID	30543
Full Name	SRY (sex determining region Y)-box 21a
Synonyms	SRY-box,sox21,sox25,sox30
General protein information	Preferred Names SRY (sex determining region Y)-box 21a Names transcription factor Sox-21-A SRY-box containing gene 25
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_131286.1	NP_571361.1	transcription factor Sox-21-A

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Fine selection of up-regulated genes during ovulation by
Klangnurak W, Tokumoto T
Zoological letters32(2017)

The draft genome of the grass carp (Ctenopharyngodon idellus) provides insights into its evolution and vegetarian adaptation.
Wang Y, Lu Y, Zhang Y, Ning Z, Li Y, Zhao Q, Lu H, Huang R, Xia X, Feng Q, Liang X, Liu K, Zhang L, Lu T, Huang T, Fan D, Weng Q, Zhu C, Lu Y, Li W, Wen Z, Zhou C, Tian Q, Kang X, Shi M, Zhang W, Jang S, Du F, He S, Liao L, Li Y, Gui B, He H, Ning Z, Yang C, He L, Luo L, Yang R, Luo Q, Liu X, Li S, Huang W, Xiao L, Lin H, Han B, Zhu Z
Nature genetics47(6)625-31(2015 Jun)

Time point-based integrative analyses of deep-transcriptome identify four signal pathways in blastemal regeneration of zebrafish lower jaw.
Zhang H, Wang X, Lyu K, Gao S, Wang G, Fan C, Zhang XA, Yan J
Stem cells (Dayton, Ohio)33(3)806-18(2015 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

conserved non-coding elements at the vertebrate Sox21 locus are crucial for Sox21 expression in the embryonic lens and that loss of Sox21 function interferes with normal lens development
Title: Lens development depends on a pair of highly conserved Sox21 regulatory elements.

Comparative analysis of duplicated sox21 genes in zebrafish.
Title: Comparative analysis of duplicated sox21 genes in zebrafish.

Sox21a acts as a repressor in dorso-ventral patterning.
Title: Ectopic expression and knockdown of a zebrafish sox21 reveal its role as a transcriptional repressor in early development.

The following sox21a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the sox21a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa03149	NM_131286.1 Latest version!	Danio rerio SRY-box transcription factor 21a (sox21a), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

sox21a ( NM_131286.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_571361.1 Danio rerio SRY-box transcription factor 21a (sox21a), mRNA.

Price & Availability↑

CloneID	ODa03149
Clone ID Related Accession (Same CDS sequence)	NM_131286.1
Accession Version	NM_131286.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 720bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-06-30
Organism	Danio rerio(zebrafish)
Product	transcription factor Sox-21-A
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF101266.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AF101266.1 [ECO:0000332] ##Evidence-Data-END##

ATGGCAAAGC CCATGGATCA TGTTAAGCGC CCCATGAACG CTTTTATGGT GTGGTCGAGA 
GCTCAGAGGC GGAAGATGGC TCTGGACAAC CCGAAGATGC ACAACTCGGA GATCAGCAAG 
CGCCTCGGAG GCGAATGGAA ACTCCTGTCA GACTCTGAGA AAAGACCTTT CATTGACGAG 
GCCAAACGAC TCCGAGCCGT CCACATGAAG GAGCACCCGG ATTACAAATA CAGACCGCGG 
CGAAAGCCCA AAAACTTGAT CAAAAAAGAC AGGTATCATT TTAATGTCAC GTATAATCTG 
GGTGAGGGGG ACCCGCTGAA GAGCGCGCGC CTGTCCGGGG ACGCGCTCTC GGACTCTTTG 
AGCGCGGAGA AAACGTCTGT CGCCGCCGCT GCTACTCGGG TGTTTTTCAG CCACCATCTG 
TCCGCAAACC CCTATCCTTT TCTCGACCTG AACTCTAAAA TATCGGAATT ACCTCCTGCA 
CCTTTCCCGC ATTATTCCGT GCTCGGGTAT CCAAGCGGAC TCCCCGCGTT TCCCGGGATG 
GGGGTTCTGG CCGGTGCGCC CCACGCTCAC CCGTCTGCGG GGAGTCCGGG CCACATGCTG 
CCCTATAACT GCCTGGGCTG GCCGGGCTCT GGACCTGCCG TTCCCTCATC TTATGTACTT 
TTACCAGGAA TGACCAAAGC TCAGCATGAA CCTTACCTGG CATATGCTGC AACGATATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_571361.1
CDS	255..974
Translation	MAKPMDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKPKNLIKKDRYHFNVTYNLGEGDPLKSARLSGDALSDSLSAEKTSVAAAATRVFFSHHLSANPYPFLDLNSKISELPPAPFPHYSVLGYPSGLPAFPGMGVLAGAPHAHPSAGSPGHMLPYNCLGWPGSGPAVPSSYVLLPGMTKAQHEPYLAYAATI

Target ORF information:

RefSeq Version	NM_131286.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio SRY-box transcription factor 21a (sox21a), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_131286.1

ORF Insert Sequence:

ATGGCAAAGC CCATGGATCA TGTTAAGCGC CCCATGAACG CTTTTATGGT GTGGTCGAGA 
GCTCAGAGGC GGAAGATGGC TCTGGACAAC CCGAAGATGC ACAACTCGGA GATCAGCAAG 
CGCCTCGGAG GCGAATGGAA ACTCCTGTCA GACTCTGAGA AAAGACCTTT CATTGACGAG 
GCCAAACGAC TCCGAGCCGT CCACATGAAG GAGCACCCGG ATTACAAATA CAGACCGCGG 
CGAAAGCCCA AAAACTTGAT CAAAAAAGAC AGGTATCATT TTAATGTCAC GTATAATCTG 
GGTGAGGGGG ACCCGCTGAA GAGCGCGCGC CTGTCCGGGG ACGCGCTCTC GGACTCTTTG 
AGCGCGGAGA AAACGTCTGT CGCCGCCGCT GCTACTCGGG TGTTTTTCAG CCACCATCTG 
TCCGCAAACC CCTATCCTTT TCTCGACCTG AACTCTAAAA TATCGGAATT ACCTCCTGCA 
CCTTTCCCGC ATTATTCCGT GCTCGGGTAT CCAAGCGGAC TCCCCGCGTT TCCCGGGATG 
GGGGTTCTGG CCGGTGCGCC CCACGCTCAC CCGTCTGCGG GGAGTCCGGG CCACATGCTG 
CCCTATAACT GCCTGGGCTG GCCGGGCTCT GGACCTGCCG TTCCCTCATC TTATGTACTT 
TTACCAGGAA TGACCAAAGC TCAGCATGAA CCTTACCTGG CATATGCTGC AACGATATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Fine selection of up-regulated genes during ovulation by
Zoological letters32(2017)
Klangnurak W,Tokumoto T

The draft genome of the grass carp (Ctenopharyngodon idellus) provides insights into its evolution and vegetarian adaptation.
Nature genetics47(6)625-31(2015 Jun)
Wang Y,Lu Y,Zhang Y,Ning Z,Li Y,Zhao Q,Lu H,Huang R,Xia X,Feng Q,Liang X,Liu K,Zhang L,Lu T,Huang T,Fan D,Weng Q,Zhu C,Lu Y,Li W,Wen Z,Zhou C,Tian Q,Kang X,Shi M,Zhang W,Jang S,Du F,He S,Liao L,Li Y,Gui B,He H,Ning Z,Yang C,He L,Luo L,Yang R,Luo Q,Liu X,Li S,Huang W,Xiao L,Lin H,Han B,Zhu Z

Time point-based integrative analyses of deep-transcriptome identify four signal pathways in blastemal regeneration of zebrafish lower jaw.
Stem cells (Dayton, Ohio)33(3)806-18(2015 Mar)
Zhang H,Wang X,Lyu K,Gao S,Wang G,Fan C,Zhang XA,Yan J

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sox21a cDNA ORF clone, Danio rerio(zebrafish)

Gene

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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