Gene Symbol | LOC100331497 |
Entrez Gene ID | 100331497 |
Full Name | U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1-like |
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » LOC100331497 cDNA ORF clone
Gene Symbol | LOC100331497 |
Entrez Gene ID | 100331497 |
Full Name | U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1-like |
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_001327888.1 | NP_001314817.1 | U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1-like |
XM_021474902.1 | XP_021330577.1 | U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1-like isoform X1 |
XM_021474903.1 | XP_021330578.1 | U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1-like isoform X2 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100331497 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100331497 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa49487 | |
Clone ID Related Accession (Same CDS sequence) | NM_001327888.1 | |
Accession Version | NM_001327888.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 414bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-08-05 | |
Organism | Danio rerio(zebrafish) | |
Product | U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1-like | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU468826.10 and EH579308.1. On May 27, 2016 this sequence version replaced XM_009300048.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: EH579308.1, CK694256.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTCATG CGAAGAGGTT TTCTCAAATT CCCATGTCTA AGTGCATGCG GGATCTCTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001314817.1 |
CDS | 51..464 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001327888.1 |
1 | ATGGCTCATG CGAAGAGGTT TTCTCAAATT CCCATGTCTA AGTGCATGCG GGATCTCTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa141921 | |
Clone ID Related Accession (Same CDS sequence) | XM_021474902.1 | |
Accession Version | XM_021474902.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 369bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1-like isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007115.7) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGGATC TCTGTAAAGA GGAAGATTAC TCGTTTCTGA CCGGTCTGGA GAAGCAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021330577.1 |
CDS | 163..531 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021474902.1 |
1 | ATGCGGGATC TCTGTAAAGA GGAAGATTAC TCGTTTCTGA CCGGTCTGGA GAAGCAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa141922 | |
Clone ID Related Accession (Same CDS sequence) | XM_021474903.1 | |
Accession Version | XM_021474903.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 306bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1-like isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007115.7) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCATG CGAAGAGGTT TTCTCAAATT CCCATGTCTA AGTGCATGCG GGATCTCTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021330578.1 |
CDS | 106..411 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021474903.1 |
1 | ATGGCTCATG CGAAGAGGTT TTCTCAAATT CCCATGTCTA AGTGCATGCG GGATCTCTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |