Gene Symbol | AT5G51300 |
Entrez Gene ID | 835204 |
Full Name | splicing factor-like protein |
Synonyms | Arabidopsis SF1 homolog,AtSF1,MWD22.25,MWD22_25 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » AT5G51300 cDNA ORF clone
Gene Symbol | AT5G51300 |
Entrez Gene ID | 835204 |
Full Name | splicing factor-like protein |
Synonyms | Arabidopsis SF1 homolog,AtSF1,MWD22.25,MWD22_25 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001036978.2 | NP_001032055.1 | splicing factor-like protein |
NM_124509.4 | NP_199943.1 | splicing factor-like protein |
NM_180838.2 | NP_851169.1 | splicing factor-like protein |
Arabidopsis thaliana (thale cress) | AT5G51300 | NP_001032055.1 |
Oryza sativa (rice) | Os04g0385700 | NP_001173909.1 |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See LH, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie WR, Wilson RK, Murphy G, Bancroft I, Volckaert G, Wambutt R, D?sterh?ft A, Stiekema W, Pohl T, Entian KD, Terryn N, Hartley N, Bent E, Johnson S, Langham SA, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst RK, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes HW, Bevan M, Fransz P, , ,
Nature408(6814)823-6(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The Arabidopsis splicing factors, AtU2AF65, AtU2AF35, and AtSF1 shuttle between nuclei and cytoplasms
Title: The Arabidopsis splicing factors, AtU2AF65, AtU2AF35, and AtSF1 shuttle between nuclei and cytoplasms.
RRM domain of Arabidopsis splicing factor SF1 is important for pre-mRNA splicing of a specific set of genes
Title: RRM domain of Arabidopsis splicing factor SF1 is important for pre-mRNA splicing of a specific set of genes.
Data indicate that the mutant allele of AtSF1 (At5g51300) containing a T-DNA insertion conferred pleiotropic developmental defects, including early flowering and abnormal sensitivity to abscisic acid.
Title: A homolog of splicing factor SF1 is essential for development and is involved in the alternative splicing of pre-mRNA in Arabidopsis thaliana.
The following AT5G51300 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT5G51300 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb21178 | |
Clone ID Related Accession (Same CDS sequence) | NM_001036978.2 , NM_124509.4 , NM_180838.2 | |
Accession Version | NM_001036978.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2415bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | splicing factor-like protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_001036978.1. |
1 | ATGGAGTCCG TCGAAATGAA CAATCCCAAT TCGCAAACCC TAGATCAACC TCCTCCTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001032055.1 |
CDS | 53..2467 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001036978.2 |
1 | ATGGAGTCCG TCGAAATGAA CAATCCCAAT TCGCAAACCC TAGATCAACC TCCTCCTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb21178 | |
Clone ID Related Accession (Same CDS sequence) | NM_001036978.2 , NM_124509.4 , NM_180838.2 | |
Accession Version | NM_124509.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2415bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | splicing factor-like protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_124509.3. |
1 | ATGGAGTCCG TCGAAATGAA CAATCCCAAT TCGCAAACCC TAGATCAACC TCCTCCTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_199943.1 |
CDS | 90..2504 |
Translation |
Target ORF information:
Target ORF information:
|
NM_124509.4 |
1 | ATGGAGTCCG TCGAAATGAA CAATCCCAAT TCGCAAACCC TAGATCAACC TCCTCCTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb21178 | |
Clone ID Related Accession (Same CDS sequence) | NM_001036978.2 , NM_124509.4 , NM_180838.2 | |
Accession Version | NM_180838.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2415bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | splicing factor-like protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_180838.1. |
1 | ATGGAGTCCG TCGAAATGAA CAATCCCAAT TCGCAAACCC TAGATCAACC TCCTCCTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_851169.1 |
CDS | 90..2504 |
Translation |
Target ORF information:
Target ORF information:
|
NM_180838.2 |
1 | ATGGAGTCCG TCGAAATGAA CAATCCCAAT TCGCAAACCC TAGATCAACC TCCTCCTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. |