AT4G38030 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Gene
Clones
gRNAs

Summary

Gene Symbol	AT4G38030
Entrez Gene ID	829959
Full Name	Rhamnogalacturonate lyase family protein
Synonyms	F20D10.150,F20D10_150
Gene Type	protein-coding
Organism	Arabidopsis thaliana(thale cress)

mRNA and Protein(s)

mRNA	Protein	Name
NM_119964.2	NP_195516.2	Rhamnogalacturonate lyase family protein

Pathways from BioSystems

Homologies

Arabidopsis thaliana (thale cress)	AT4G38030	NP_195516.2
Arabidopsis thaliana (thale cress)	AT4G37950	NP_195508.2
Arabidopsis thaliana (thale cress)	AT2G22620	NP_179847.1

Gene Ontology
Bibliography

Related articles in PubMed

Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
Mayer K, Sch?ller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D?sterh?ft A, Stiekema W, Entian KD, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M?ller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham SA, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang YJ, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K?tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream MA, Lyne M, Benes V, Rechmann S, Borkova D, Bl?cker H, Scharfe M, Grimm M, L?hnert TH, Dose S, de Haan M, Maarse A, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M?ndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes HW, Stocker S, Zaccaria P, Bevan M, Wilson RK, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby IK, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie WR
Nature402(6763)769-77(1999 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following AT4G38030 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT4G38030 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAb17394	NM_119964.2 Latest version!	Arabidopsis thaliana Rhamnogalacturonate lyase family protein (AT4G38030), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

AT4G38030 ( NM_119964.2 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_195516.2 Arabidopsis thaliana Rhamnogalacturonate lyase family protein (AT4G38030), partial mRNA.

Price & Availability↑

CloneID	OAb17394
Clone ID Related Accession (Same CDS sequence)	NM_119964.2
Accession Version	NM_119964.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2004bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-13
Organism	Arabidopsis thaliana(thale cress)
Product	Rhamnogalacturonate lyase family protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Apr 24, 2008 this sequence version replaced NM_119964.1. COMPLETENESS: incomplete on the 5' end.

ATGGTATCGC AGAAGAAGAT CGCTTCGTTA TTTATTTGTT TCCTTCTGTT GCTTCTTCTT 
CCACTCTCCT TTTCCAAGCC GACAAGGAAC TTAGATGGAA TAAGTGCAAG AGCTCCAACA 
GTGCAGCAGA TAAGAAGCAG ACATCATGGG ACTAGAGAGG TGATAGTGGA CAATGGGATA 
ATCAGAGTCA GTTTCTCGAA TCCTCAAGGA CTTATAACTG GGATCAAATA CAAAGGAATT 
GATAATGTTC TTCATCCACA TCTCCGAGAT AGAGGGTACT GGGACATAAC ATGGCAAGGA 
ACAAACATTC GCCAAGGCGG CTTAGATCGA ATCGAAGGAA CAAATTTTAG AATCATCACT 
CAAACCCAAG AACAAGTGGA GATATCGTTC TCTAGAACAT GGGAGGATGG TCATATTCCA 
TTAAACGTAG ACAAGAGGTA TATCATACGT AGAAATACTT CAGGAATCTA CATGTACGGA 
ATCTTCGAGA GACTTCCCGA ATGGCCAGAA CTCGACATGG GTTTAATTCG AATCGCTTTC 
AAACTCAACC CTGAGAGATT TCATTACATG GCGGTGGCGG ATAATCGACA AAGAGAAATG 
CCAACGGAAG ATGACCGTGA CATCAAACGT GGTCATGCCA AGGCTCTTGG TTATAAAGAG 
GCTGTACAAT TGACTCATCC TCATAACTCC ATGTTCAAAA ACCAGGTGGA TGATAAGTAC 
CAGTACACAT GTGAGATCAA AGACAACAAA GTGCACGGTT GGATCTCAAC CAAGTCCCGT 
GTCGGCTTTT GGATCATCTC ACCAAGCGGT GAATATCGCT CCGGTGGACC GATCAAACAA 
GAGCTCACGT CTCACGTCGG ACCCACGGCC ATCACGACTT TTATAAGCGG ACATTATGTT 
GGTGCGGACA TGGAGGCACA TTACAGACCT GGTGAAGCGT GGAAAAAGGT CTTGGGACCT 
GTTTTTATTT ACTTAAACTC TGATTCTACC AGCAACAATA AGCCTCAAGA TTTGTTATGG 
GAAGATGCTA AACAACAGTC CGAAAAAGAA GTCAAAGCCT GGCCGTACGA TTTTGTAGCA 
TCCTCTGACT ATCTTTCTCG TCGAGAAAGA GGAAGCGTCA CTGGTCGTCT ACTAGTCAAC 
GACAGATTCT TGACGCCGGG AAAATCTGCA TATGTCGGTT TAGCACCGCC GGGAGAAGCT 
GGTTCGTGGC AGACAAATAC TAAGGGATAT CAGTTTTGGA CCAAGACGAA CGAAACCGGT 
TACTTCACGA TAGAAAACGT TAGACCGGGA ACTTACAATC TGTATGGATG GGTTCCTGGT 
TTTATCGGGG ACTTTCGATA CCAAAACCTT GTTAACGTAG CTGCAGGTTC AGTGATTAGT 
CTCGGTAGAG TCGTGTACAA GCCACCTAGG AACGGTCCAA CGTTATGGGA GATTGGTGTA 
CCGGATCGAA CCGCTCGAGA ATACTTTATA CCGGAGCCAT ACAAGGATAC AATGAATCCG 
TTATACCTAA ACCACACCGA CAAGTTTAGA CAGTACGGAC TGTGGCAACG ATACACAGAG 
TTATATCCAA CTCATGATCT CGTCTACACA GTTGGAGTTA GTAACTATAG CCAAGACTGG 
TTCTACGCCC AAGTCACAAG GAAAACCGGT GATTTAACGT ACGTACCAAC AATATGGCAG 
ATCGTGTTTC ATCTTCCATA CGTAAACTCG CGAGGCAGCT ACACATTGCA GGTAGCTTTA 
GCCTCGGCTG CATGGGCTAA TCTACAAGTT CGGATCAATA ACCAAAACTC GTGGCCGTTT 
TTCTCAACGG GTACTATCGG AAAAGACAAT GCTATAGCAA GACATGGAAT CCATGGAATG 
TACCGGCTTT ATACCATCGA TGTGCCTGGA AGGTTGCTAA GAACCGGGAC CAACACGATT 
TATCTTCGAC AGCCTAAAGC ACAAGGACCA TTTGAAGGTC TTATGTATGA TTACATTCGT 
CTAGAAGAGC CTTCTAGAGC TTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_195516.2
CDS	1..2004
Translation	MVSQKKIASLFICFLLLLLLPLSFSKPTRNLDGISARAPTVQQIRSRHHGTREVIVDNGIIRVSFSNPQGLITGIKYKGIDNVLHPHLRDRGYWDITWQGTNIRQGGLDRIEGTNFRIITQTQEQVEISFSRTWEDGHIPLNVDKRYIIRRNTSGIYMYGIFERLPEWPELDMGLIRIAFKLNPERFHYMAVADNRQREMPTEDDRDIKRGHAKALGYKEAVQLTHPHNSMFKNQVDDKYQYTCEIKDNKVHGWISTKSRVGFWIISPSGEYRSGGPIKQELTSHVGPTAITTFISGHYVGADMEAHYRPGEAWKKVLGPVFIYLNSDSTSNNKPQDLLWEDAKQQSEKEVKAWPYDFVASSDYLSRRERGSVTGRLLVNDRFLTPGKSAYVGLAPPGEAGSWQTNTKGYQFWTKTNETGYFTIENVRPGTYNLYGWVPGFIGDFRYQNLVNVAAGSVISLGRVVYKPPRNGPTLWEIGVPDRTAREYFIPEPYKDTMNPLYLNHTDKFRQYGLWQRYTELYPTHDLVYTVGVSNYSQDWFYAQVTRKTGDLTYVPTIWQIVFHLPYVNSRGSYTLQVALASAAWANLQVRINNQNSWPFFSTGTIGKDNAIARHGIHGMYRLYTIDVPGRLLRTGTNTIYLRQPKAQGPFEGLMYDYIRLEEPSRA

Target ORF information:

RefSeq Version	NM_119964.2
Organism	Arabidopsis thaliana(thale cress)
Definition	Arabidopsis thaliana Rhamnogalacturonate lyase family protein (AT4G38030), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_119964.2

ORF Insert Sequence:

ATGGTATCGC AGAAGAAGAT CGCTTCGTTA TTTATTTGTT TCCTTCTGTT GCTTCTTCTT 
CCACTCTCCT TTTCCAAGCC GACAAGGAAC TTAGATGGAA TAAGTGCAAG AGCTCCAACA 
GTGCAGCAGA TAAGAAGCAG ACATCATGGG ACTAGAGAGG TGATAGTGGA CAATGGGATA 
ATCAGAGTCA GTTTCTCGAA TCCTCAAGGA CTTATAACTG GGATCAAATA CAAAGGAATT 
GATAATGTTC TTCATCCACA TCTCCGAGAT AGAGGGTACT GGGACATAAC ATGGCAAGGA 
ACAAACATTC GCCAAGGCGG CTTAGATCGA ATCGAAGGAA CAAATTTTAG AATCATCACT 
CAAACCCAAG AACAAGTGGA GATATCGTTC TCTAGAACAT GGGAGGATGG TCATATTCCA 
TTAAACGTAG ACAAGAGGTA TATCATACGT AGAAATACTT CAGGAATCTA CATGTACGGA 
ATCTTCGAGA GACTTCCCGA ATGGCCAGAA CTCGACATGG GTTTAATTCG AATCGCTTTC 
AAACTCAACC CTGAGAGATT TCATTACATG GCGGTGGCGG ATAATCGACA AAGAGAAATG 
CCAACGGAAG ATGACCGTGA CATCAAACGT GGTCATGCCA AGGCTCTTGG TTATAAAGAG 
GCTGTACAAT TGACTCATCC TCATAACTCC ATGTTCAAAA ACCAGGTGGA TGATAAGTAC 
CAGTACACAT GTGAGATCAA AGACAACAAA GTGCACGGTT GGATCTCAAC CAAGTCCCGT 
GTCGGCTTTT GGATCATCTC ACCAAGCGGT GAATATCGCT CCGGTGGACC GATCAAACAA 
GAGCTCACGT CTCACGTCGG ACCCACGGCC ATCACGACTT TTATAAGCGG ACATTATGTT 
GGTGCGGACA TGGAGGCACA TTACAGACCT GGTGAAGCGT GGAAAAAGGT CTTGGGACCT 
GTTTTTATTT ACTTAAACTC TGATTCTACC AGCAACAATA AGCCTCAAGA TTTGTTATGG 
GAAGATGCTA AACAACAGTC CGAAAAAGAA GTCAAAGCCT GGCCGTACGA TTTTGTAGCA 
TCCTCTGACT ATCTTTCTCG TCGAGAAAGA GGAAGCGTCA CTGGTCGTCT ACTAGTCAAC 
GACAGATTCT TGACGCCGGG AAAATCTGCA TATGTCGGTT TAGCACCGCC GGGAGAAGCT 
GGTTCGTGGC AGACAAATAC TAAGGGATAT CAGTTTTGGA CCAAGACGAA CGAAACCGGT 
TACTTCACGA TAGAAAACGT TAGACCGGGA ACTTACAATC TGTATGGATG GGTTCCTGGT 
TTTATCGGGG ACTTTCGATA CCAAAACCTT GTTAACGTAG CTGCAGGTTC AGTGATTAGT 
CTCGGTAGAG TCGTGTACAA GCCACCTAGG AACGGTCCAA CGTTATGGGA GATTGGTGTA 
CCGGATCGAA CCGCTCGAGA ATACTTTATA CCGGAGCCAT ACAAGGATAC AATGAATCCG 
TTATACCTAA ACCACACCGA CAAGTTTAGA CAGTACGGAC TGTGGCAACG ATACACAGAG 
TTATATCCAA CTCATGATCT CGTCTACACA GTTGGAGTTA GTAACTATAG CCAAGACTGG 
TTCTACGCCC AAGTCACAAG GAAAACCGGT GATTTAACGT ACGTACCAAC AATATGGCAG 
ATCGTGTTTC ATCTTCCATA CGTAAACTCG CGAGGCAGCT ACACATTGCA GGTAGCTTTA 
GCCTCGGCTG CATGGGCTAA TCTACAAGTT CGGATCAATA ACCAAAACTC GTGGCCGTTT 
TTCTCAACGG GTACTATCGG AAAAGACAAT GCTATAGCAA GACATGGAAT CCATGGAATG 
TACCGGCTTT ATACCATCGA TGTGCCTGGA AGGTTGCTAA GAACCGGGAC CAACACGATT 
TATCTTCGAC AGCCTAAAGC ACAAGGACCA TTTGAAGGTC TTATGTATGA TTACATTCGT 
CTAGAAGAGC CTTCTAGAGC TTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
Nature402(6763)769-77(1999 Dec)
Mayer K,Sch?ller C,Wambutt R,Murphy G,Volckaert G,Pohl T,D?sterh?ft A,Stiekema W,Entian KD,Terryn N,Harris B,Ansorge W,Brandt P,Grivell L,Rieger M,Weichselgartner M,de Simone V,Obermaier B,Mache R,M?ller M,Kreis M,Delseny M,Puigdomenech P,Watson M,Schmidtheini T,Reichert B,Portatelle D,Perez-Alonso M,Boutry M,Bancroft I,Vos P,Hoheisel J,Zimmermann W,Wedler H,Ridley P,Langham SA,McCullagh B,Bilham L,Robben J,Van der Schueren J,Grymonprez B,Chuang YJ,Vandenbussche F,Braeken M,Weltjens I,Voet M,Bastiaens I,Aert R,Defoor E,Weitzenegger T,Bothe G,Ramsperger U,Hilbert H,Braun M,Holzer E,Brandt A,Peters S,van Staveren M,Dirske W,Mooijman P,Klein Lankhorst R,Rose M,Hauf J,K?tter P,Berneiser S,Hempel S,Feldpausch M,Lamberth S,Van den Daele H,De Keyser A,Buysshaert C,Gielen J,Villarroel R,De Clercq R,Van Montagu M,Rogers J,Cronin A,Quail M,Bray-Allen S,Clark L,Doggett J,Hall S,Kay M,Lennard N,McLay K,Mayes R,Pettett A,Rajandream MA,Lyne M,Benes V,Rechmann S,Borkova D,Bl?cker H,Scharfe M,Grimm M,L?hnert TH,Dose S,de Haan M,Maarse A,Sch?fer M,M?ller-Auer S,Gabel C,Fuchs M,Fartmann B,Granderath K,Dauner D,Herzl A,Neumann S,Argiriou A,Vitale D,Liguori R,Piravandi E,Massenet O,Quigley F,Clabauld G,M?ndlein A,Felber R,Schnabl S,Hiller R,Schmidt W,Lecharny A,Aubourg S,Chefdor F,Cooke R,Berger C,Montfort A,Casacuberta E,Gibbons T,Weber N,Vandenbol M,Bargues M,Terol J,Torres A,Perez-Perez A,Purnelle B,Bent E,Johnson S,Tacon D,Jesse T,Heijnen L,Schwarz S,Scholler P,Heber S,Francs P,Bielke C,Frishman D,Haase D,Lemcke K,Mewes HW,Stocker S,Zaccaria P,Bevan M,Wilson RK,de la Bastide M,Habermann K,Parnell L,Dedhia N,Gnoj L,Schutz K,Huang E,Spiegel L,Sehkon M,Murray J,Sheet P,Cordes M,Abu-Threideh J,Stoneking T,Kalicki J,Graves T,Harmon G,Edwards J,Latreille P,Courtney L,Cloud J,Abbott A,Scott K,Johnson D,Minx P,Bentley D,Fulton B,Miller N,Greco T,Kemp K,Kramer J,Fulton L,Mardis E,Dante M,Pepin K,Hillier L,Nelson J,Spieth J,Ryan E,Andrews S,Geisel C,Layman D,Du H,Ali J,Berghoff A,Jones K,Drone K,Cotton M,Joshu C,Antonoiu B,Zidanic M,Strong C,Sun H,Lamar B,Yordan C,Ma P,Zhong J,Preston R,Vil D,Shekher M,Matero A,Shah R,Swaby IK,O'Shaughnessy A,Rodriguez M,Hoffmann J,Till S,Granat S,Shohdy N,Hasegawa A,Hameed A,Lodhi M,Johnson A,Chen E,Marra M,Martienssen R,McCombie WR

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AT4G38030 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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