Gene Symbol | LSD1 |
Entrez Gene ID | 827786 |
Full Name | LSD1 zinc finger family protein |
Synonyms | F9F13.30,F9F13_30,LESION SIMULATING DISEASE,LESION SIMULATING DISEASE 1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » LSD1 cDNA ORF clone
Gene Symbol | LSD1 |
Entrez Gene ID | 827786 |
Full Name | LSD1 zinc finger family protein |
Synonyms | F9F13.30,F9F13_30,LESION SIMULATING DISEASE,LESION SIMULATING DISEASE 1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_179218.4 | NP_849549.1 | LSD1 zinc finger family protein |
NM_001036602.2 | NP_001031679.1 | LSD1 zinc finger family protein |
NM_118157.5 | NP_567599.3 | LSD1 zinc finger family protein |
NM_001084944.2 | NP_001078413.1 | LSD1 zinc finger family protein |
NM_001341436.1 | NP_001328264.1 | LSD1 zinc finger family protein |
NM_179217.4 | NP_849548.1 | LSD1 zinc finger family protein |
NM_001036603.2 | NP_001031680.2 | LSD1 zinc finger family protein |
NM_001160785.1 | NP_001154257.1 | LSD1 zinc finger family protein |
NM_001036601.1 | NP_001031678.1 | LSD1 zinc finger family protein |
Oryza sativa (rice) | Os03g0639600 | NP_001050737.1 |
Arabidopsis thaliana (thale cress) | AT4G20380 | NP_001031679.1 |
Oryza sativa (rice) | Os12g0611000 | NP_001067250.1 |
Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
Mayer K, Sch?ller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D?sterh?ft A, Stiekema W, Entian KD, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M?ller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham SA, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang YJ, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K?tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream MA, Lyne M, Benes V, Rechmann S, Borkova D, Bl?cker H, Scharfe M, Grimm M, L?hnert TH, Dose S, de Haan M, Maarse A, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M?ndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes HW, Stocker S, Zaccaria P, Bevan M, Wilson RK, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby IK, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie WR
Nature402(6763)769-77(1999 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Data indicate that Arabidopsis proteins PAD4, LSD1 and EDS1 constitute a molecular hub, which integrates plant responses to water stress, vegetative biomass production and generative development.
Title: PAD4, LSD1 and EDS1 regulate drought tolerance, plant biomass production, and cell wall properties.
LSD1 and EDS1 regulate processes extinguishing excessive energy, reactive oxygen species formation and subsequent programmed cell death in response to different stresses related to impaired electron transport.
Title: Lesion simulating disease 1 and enhanced disease susceptibility 1 differentially regulate UV-C-induced photooxidative stress signalling and programmed cell death in Arabidopsis thaliana.
lsd1-catalase interaction plays an important role in regulating programmed cell death (PCD) in Arabidopsis.
Title: LESION SIMULATING DISEASE1 interacts with catalases to regulate hypersensitive cell death in Arabidopsis.
These findings reveal a role of LSD1 in regulating cell death trigged by cold stress and a link between cold stress responses and ROS-associated signaling.
Title: The Arabidopsis LSD1 gene plays an important role in the regulation of low temperature-dependent cell death.
Data suggest that the balanced activities of LSD1, EDS1, PAD4, and EIN2 regulate signaling of programmed cell death, light acclimation, and holistic defense responses that are initiated, at least in part, by redox changes of the plastoquinone pool.
Title: Chloroplast signaling and LESION SIMULATING DISEASE1 regulate crosstalk between light acclimation and immunity in Arabidopsis.
The following LSD1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LSD1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb15479 | |
Clone ID Related Accession (Same CDS sequence) | NM_001036602.2 , NM_118157.5 , NM_179217.4 , NM_001036603.2 , NM_001036601.1 | |
Accession Version | NM_001036602.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 555bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | LSD1 zinc finger family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Apr 24, 2008 this sequence version replaced NM_001036602.1. |
1 | ATGCAGGACC AGCTGGTGTG TCATGGTTGT AGGAATTTAT TGATGTATCC TAGAGGAGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001031679.1 |
CDS | 186..740 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001036602.2 |
1 | ATGCAGGACC AGCTGGTGTG TCATGGTTGT AGGAATTTAT TGATGTATCC TAGAGGAGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb15479 | |
Clone ID Related Accession (Same CDS sequence) | NM_001036602.2 , NM_118157.5 , NM_179217.4 , NM_001036603.2 , NM_001036601.1 | |
Accession Version | NM_118157.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 555bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | LSD1 zinc finger family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Apr 18, 2007 this sequence version replaced NM_118157.4. |
1 | ATGCAGGACC AGCTGGTGTG TCATGGTTGT AGGAATTTAT TGATGTATCC TAGAGGAGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_567599.3 |
CDS | 237..791 |
Translation |
Target ORF information:
Target ORF information:
|
NM_118157.5 |
1 | ATGCAGGACC AGCTGGTGTG TCATGGTTGT AGGAATTTAT TGATGTATCC TAGAGGAGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb15479 | |
Clone ID Related Accession (Same CDS sequence) | NM_001036602.2 , NM_118157.5 , NM_179217.4 , NM_001036603.2 , NM_001036601.1 | |
Accession Version | NM_179217.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 555bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | LSD1 zinc finger family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Sep 12, 2016 this sequence version replaced NM_179217.3. |
1 | ATGCAGGACC AGCTGGTGTG TCATGGTTGT AGGAATTTAT TGATGTATCC TAGAGGAGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_849548.1 |
CDS | 280..834 |
Translation |
Target ORF information:
Target ORF information:
|
NM_179217.4 |
1 | ATGCAGGACC AGCTGGTGTG TCATGGTTGT AGGAATTTAT TGATGTATCC TAGAGGAGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb15479 | |
Clone ID Related Accession (Same CDS sequence) | NM_001036602.2 , NM_118157.5 , NM_179217.4 , NM_001036603.2 , NM_001036601.1 | |
Accession Version | NM_001036603.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 555bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | LSD1 zinc finger family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Apr 18, 2007 this sequence version replaced NM_001036603.1. |
1 | ATGCAGGACC AGCTGGTGTG TCATGGTTGT AGGAATTTAT TGATGTATCC TAGAGGAGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001031680.2 |
CDS | 269..823 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001036603.2 |
1 | ATGCAGGACC AGCTGGTGTG TCATGGTTGT AGGAATTTAT TGATGTATCC TAGAGGAGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb15479 | |
Clone ID Related Accession (Same CDS sequence) | NM_001036602.2 , NM_118157.5 , NM_179217.4 , NM_001036603.2 , NM_001036601.1 | |
Accession Version | NM_001036601.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 555bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | LSD1 zinc finger family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). |
1 | ATGCAGGACC AGCTGGTGTG TCATGGTTGT AGGAATTTAT TGATGTATCC TAGAGGAGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001031678.1 |
CDS | 169..723 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001036601.1 |
1 | ATGCAGGACC AGCTGGTGTG TCATGGTTGT AGGAATTTAT TGATGTATCC TAGAGGAGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb15480 | |
Clone ID Related Accession (Same CDS sequence) | NM_179218.4 , NM_001084944.2 | |
Accession Version | NM_179218.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 570bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | LSD1 zinc finger family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Sep 12, 2016 this sequence version replaced NM_179218.3. |
1 | ATGAAAGTAG CAGATATGCA GGACCAGCTG GTGTGTCATG GTTGTAGGAA TTTATTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_849549.1 |
CDS | 298..867 |
Translation |
Target ORF information:
Target ORF information:
|
NM_179218.4 |
1 | ATGAAAGTAG CAGATATGCA GGACCAGCTG GTGTGTCATG GTTGTAGGAA TTTATTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb15480 | |
Clone ID Related Accession (Same CDS sequence) | NM_179218.4 , NM_001084944.2 | |
Accession Version | NM_001084944.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 570bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | LSD1 zinc finger family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Sep 12, 2016 this sequence version replaced NM_001084944.1. |
1 | ATGAAAGTAG CAGATATGCA GGACCAGCTG GTGTGTCATG GTTGTAGGAA TTTATTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001078413.1 |
CDS | 346..915 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001084944.2 |
1 | ATGAAAGTAG CAGATATGCA GGACCAGCTG GTGTGTCATG GTTGTAGGAA TTTATTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb32466 | |
Clone ID Related Accession (Same CDS sequence) | NM_001160785.1 | |
Accession Version | NM_001160785.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 633bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | LSD1 zinc finger family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). |
1 | ATGCAGGACC AGCTGGTGTG TCATGGTTGT AGGAATTTAT TGATGTATCC TAGAGGAGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001154257.1 |
CDS | 266..898 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001160785.1 |
1 | ATGCAGGACC AGCTGGTGTG TCATGGTTGT AGGAATTTAT TGATGTATCC TAGAGGAGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb39536 | |
Clone ID Related Accession (Same CDS sequence) | NM_001341436.1 | |
Accession Version | NM_001341436.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 390bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | LSD1 zinc finger family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). |
1 | ATGCAGGACC AGCTGGTGTG TCATGGTTGT AGGAATTTAT TGATGTATCC TAGAGGAGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001328264.1 |
CDS | 280..669 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001341436.1 |
1 | ATGCAGGACC AGCTGGTGTG TCATGGTTGT AGGAATTTAT TGATGTATCC TAGAGGAGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. |