Gene Symbol | AtATG18a |
Entrez Gene ID | 825452 |
Full Name | Transducin/WD40 repeat-like superfamily protein |
Synonyms | ATG18a,PEROXISOME UNUSUAL POSITIONING 2,PEUP2,autophagy 18a |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » AtATG18a cDNA ORF clone
Gene Symbol | AtATG18a |
Entrez Gene ID | 825452 |
Full Name | Transducin/WD40 repeat-like superfamily protein |
Synonyms | ATG18a,PEROXISOME UNUSUAL POSITIONING 2,PEUP2,autophagy 18a |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_116142.6 | NP_567132.4 | Transducin/WD40 repeat-like superfamily protein |
NM_001035841.4 | NP_001030918.4 | Transducin/WD40 repeat-like superfamily protein |
LOC719616 | XP_001114123.2 | |
Arabidopsis thaliana (thale cress) | AtATG18a | NP_567132.4 |
Oryza sativa (rice) | Os01g0934000 | NP_001045307.1 |
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.
Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl?cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell LA, Mache R, Puigdom?nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu?tier F, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L?hnert TH, Nordsiek G, Reichelt J, Scharfe M, Sch?n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw?lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse AC, Alcaraz JP, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes HW, Mayer KF, Kaul S, Town CD, Koo HL, Tallon LJ, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii CY, Shea TP, Creasy TH, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill JE, Feldblyum TV, Preuss D, Lin X, Nierman WC, Salzberg SL, White O, Venter JC, Fraser CM, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,
Nature408(6814)820-2(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Data show that atg18a-2 is also resistant to the powdery mildew pathogen, Golovinomyces cichoracearum, and it shows mildew-induced cell death similar to the atg2 mutant.
Title: The autophagy gene, ATG18a, plays a negative role in powdery mildew resistance and mildew-induced cell death in Arabidopsis.
Data demonstrate the induction of autophagy in high salt and osmotic stress conditions, concomitant with the upregulation of expression of an Arabidopsis thaliana autophagy-related gene AtATG18a
Title: Autophagy is required for tolerance of drought and salt stress in plants.
AtATG18a protein is likely to be required for autophagosome formation during nutrient stress and senescence in Arabidopsis. [AtATG18a]
Title: AtATG18a is required for the formation of autophagosomes during nutrient stress and senescence in Arabidopsis thaliana.
The following AtATG18a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AtATG18a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb14163 | |
Clone ID Related Accession (Same CDS sequence) | NM_116142.6 | |
Accession Version | NM_116142.6 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1278bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Transducin/WD40 repeat-like superfamily protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). On Sep 12, 2016 this sequence version replaced NM_116142.5. |
1 | ATGGCCACCG TATCTTCTTC CTCCTGGCCA AACCCCAACC CTAATCCCGA TTCCACGTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_567132.4 |
CDS | 134..1411 |
Translation |
Target ORF information:
Target ORF information:
|
NM_116142.6 |
1 | ATGGCCACCG TATCTTCTTC CTCCTGGCCA AACCCCAACC CTAATCCCGA TTCCACGTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb14164 | |
Clone ID Related Accession (Same CDS sequence) | NM_001035841.4 | |
Accession Version | NM_001035841.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1191bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Transducin/WD40 repeat-like superfamily protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). On Jun 19, 2009 this sequence version replaced NM_001035841.3. |
1 | ATGGCCACCG TATCTTCTTC CTCCTGGCCA AACCCCAACC CTAATCCCGA TTCCACGTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001030918.4 |
CDS | 123..1313 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001035841.4 |
1 | ATGGCCACCG TATCTTCTTC CTCCTGGCCA AACCCCAACC CTAATCCCGA TTCCACGTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. |