Gene Symbol | FPA |
Entrez Gene ID | 818942 |
Full Name | RNA binding protein |
Synonyms | T1O24.15 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » FPA cDNA ORF clone
Gene Symbol | FPA |
Entrez Gene ID | 818942 |
Full Name | RNA binding protein |
Synonyms | T1O24.15 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_129902.3 | NP_181869.2 | RNA binding protein |
NM_001084578.1 | NP_001078047.1 | RNA binding protein |
NM_001337028.1 | NP_001323585.1 | RNA binding protein |
NM_001084577.2 | NP_001078046.1 | RNA binding protein |
NM_001337027.1 | NP_001323584.1 | RNA binding protein |
NM_001084579.2 | NP_001078048.1 | RNA binding protein |
Oryza sativa (rice) | Os09g0516300 | NP_001063671.1 |
Arabidopsis thaliana (thale cress) | FPA | NP_001078048.1 |
Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.
Lin X, Kaul S, Rounsley S, Shea TP, Benito MI, Town CD, Fujii CY, Mason T, Bowman CL, Barnstead M, Feldblyum TV, Buell CR, Ketchum KA, Lee J, Ronning CM, Koo HL, Moffat KS, Cronin LA, Shen M, Pai G, Van Aken S, Umayam L, Tallon LJ, Gill JE, Adams MD, Carrera AJ, Creasy TH, Goodman HM, Somerville CR, Copenhaver GP, Preuss D, Nierman WC, White O, Eisen JA, Salzberg SL, Fraser CM, Venter JC
Nature402(6763)761-8(1999 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The recovery of the native ZOU gene expression in the spz2 zou-4 double mutant is caused by transcriptional read-through of the intronic T-DNA as a result of decreased proximal polyadenylation.
Title: Reduced function of the RNA-binding protein FPA rescues a T-DNA insertion mutant in the Arabidopsis ZHOUPI gene by promoting transcriptional read-through.
The crystal structure of Arabidopsis thaliana FPA SPOC domain at 2.7 A resolution is presented.
Title: Crystal Structure of the SPOC Domain of the Arabidopsis Flowering Regulator FPA.
we show that defective termination at specific loci in fpa mutants is shared with dicer-like 1 (dcl1) or dcl4 mutants, leading us to develop alternative explanations for some silencing roles of these proteins
Title: Transcription termination and chimeric RNA formation controlled by Arabidopsis thaliana FPA.
FCA and FPA play important roles in the A. thaliana genome in RNA 3' processing and transcription termination, thus limiting intergenic transcription.
Title: RNA 3' processing functions of Arabidopsis FCA and FPA limit intergenic transcription.
FPA functions redundantly with FCA, another RNA binding protein that controls flowering and RNA silencing, to control the expression of alternatively polyadenylated antisense RNAs at the locus encoding the floral repressor FLC.
Title: The spen family protein FPA controls alternative cleavage and polyadenylation of RNA.
The following FPA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the FPA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb09633 | |
Clone ID Related Accession (Same CDS sequence) | NM_129902.3 , NM_001337028.1 | |
Accession Version | NM_129902.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2577bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | RNA binding protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). On Sep 12, 2016 this sequence version replaced NM_129902.2. |
1 | ATGGCGTTAT CTATGAAGCC ATTCAGAGCC GATGATTCCG GTTTCCAGTC AAACAATCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_181869.2 |
CDS | 267..2843 |
Translation |
Target ORF information:
Target ORF information:
|
NM_129902.3 |
1 | ATGGCGTTAT CTATGAAGCC ATTCAGAGCC GATGATTCCG GTTTCCAGTC AAACAATCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb09633 | |
Clone ID Related Accession (Same CDS sequence) | NM_129902.3 , NM_001337028.1 | |
Accession Version | NM_001337028.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2577bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | RNA binding protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). COMPLETENESS: incomplete on the 3' end. |
1 | ATGGCGTTAT CTATGAAGCC ATTCAGAGCC GATGATTCCG GTTTCCAGTC AAACAATCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001323585.1 |
CDS | 257..2833 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001337028.1 |
1 | ATGGCGTTAT CTATGAAGCC ATTCAGAGCC GATGATTCCG GTTTCCAGTC AAACAATCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb09634 | |
Clone ID Related Accession (Same CDS sequence) | NM_001084578.1 , NM_001084577.2 , NM_001084579.2 | |
Accession Version | NM_001084578.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2706bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | RNA binding protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). |
1 | ATGGCGTTAT CTATGAAGCC ATTCAGAGCC GATGATTCCG GTTTCCAGTC AAACAATCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001078047.1 |
CDS | 255..2960 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001084578.1 |
1 | ATGGCGTTAT CTATGAAGCC ATTCAGAGCC GATGATTCCG GTTTCCAGTC AAACAATCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb09634 | |
Clone ID Related Accession (Same CDS sequence) | NM_001084578.1 , NM_001084577.2 , NM_001084579.2 | |
Accession Version | NM_001084577.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2706bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | RNA binding protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). On Sep 12, 2016 this sequence version replaced NM_001084577.1. |
1 | ATGGCGTTAT CTATGAAGCC ATTCAGAGCC GATGATTCCG GTTTCCAGTC AAACAATCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001078046.1 |
CDS | 267..2972 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001084577.2 |
1 | ATGGCGTTAT CTATGAAGCC ATTCAGAGCC GATGATTCCG GTTTCCAGTC AAACAATCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb09634 | |
Clone ID Related Accession (Same CDS sequence) | NM_001084578.1 , NM_001084577.2 , NM_001084579.2 | |
Accession Version | NM_001084579.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2706bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | RNA binding protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). On Sep 12, 2016 this sequence version replaced NM_001084579.1. |
1 | ATGGCGTTAT CTATGAAGCC ATTCAGAGCC GATGATTCCG GTTTCCAGTC AAACAATCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001078048.1 |
CDS | 267..2972 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001084579.2 |
1 | ATGGCGTTAT CTATGAAGCC ATTCAGAGCC GATGATTCCG GTTTCCAGTC AAACAATCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb36589 | |
Clone ID Related Accession (Same CDS sequence) | NM_001337027.1 | |
Accession Version | NM_001337027.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2289bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | RNA binding protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). COMPLETENESS: incomplete on the 3' end. |
1 | ATGGATGATG CTTTACAGGC TAAGAGCATG AATGGAAAGC CTATGGGTGG TAGCTTTTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001323584.1 |
CDS | 1835..4123 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001337027.1 |
1 | ATGGATGATG CTTTACAGGC TAAGAGCATG AATGGAAAGC CTATGGGTGG TAGCTTTTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. |