scamp5.1 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Gene
Clones
gRNAs

Summary

Gene Symbol	scamp5.1
Entrez Gene ID	493330
Full Name	secretory carrier membrane protein 5
Synonyms	scamp5
Gene Type	protein-coding
Organism	Xenopus tropicalis(tropical clawed frog)

mRNA and Protein(s)

mRNA	Protein	Name
XM_012966465.2	XP_012821919.1	secretory carrier-associated membrane protein 5 isoform X1
XM_012966466.1	XP_012821920.1	secretory carrier-associated membrane protein 5 isoform X2
XM_012966465.3	XP_012821919.2	secretory carrier-associated membrane protein 5 isoform X1
XM_012966466.2	XP_012821920.1	secretory carrier-associated membrane protein 5 isoform X2
XM_018092046.1	XP_017947535.1	secretory carrier-associated membrane protein 5 isoform X3
XM_012966464.1	XP_012821918.1	secretory carrier-associated membrane protein 5 isoform X1
NM_001007954.1	NP_001007955.1	secretory carrier-associated membrane protein 5

Pathways from BioSystems

Homologies

Gallus gallus (chicken)	SCAMP5	XP_424061.3
Homo sapiens (human)	SCAMP5	NP_620417.1
Danio rerio (zebrafish)	scamp5a	NP_991110.1
Xenopus tropicalis (tropical clawed frog)	scamp4	NP_001072492.1
Mus musculus (house mouse)	Scamp5	NP_064666.1
Xenopus tropicalis (tropical clawed frog)	scamp5	NP_001007955.1
Pan troglodytes (chimpanzee)	SCAMP5	XP_003314836.1
Bos taurus (cattle)	SCAMP5	NP_001160037.1
	SCAMP5	XP_001099073.1
Canis lupus familiaris (dog)	SCAMP5	XP_535545.2
Rattus norvegicus (Norway rat)	Scamp5	NP_113914.1

Gene Ontology
Bibliography

Related articles in PubMed

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following scamp5.1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the scamp5.1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OXa00478	NM_001007954.1 Latest version!	Xenopus tropicalis secretory carrier membrane protein 5 gene 1 (scamp5.1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OXa26887	XM_012966464.1 Latest version!	Xenopus tropicalis secretory carrier membrane protein 5 (scamp5), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OXa26887	XM_012966465.2 Latest version!	Xenopus tropicalis secretory carrier membrane protein 5 (scamp5), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OXa26888	XM_012966466.1 Latest version!	Xenopus tropicalis secretory carrier membrane protein 5 (scamp5), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
OXa00478	XM_012966465.3 Latest version!	Xenopus tropicalis secretory carrier membrane protein 5 gene 1 (scamp5.1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
OXa43102	XM_018092046.1 Latest version!	Xenopus tropicalis secretory carrier membrane protein 5 (scamp5), transcript variant X4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$104.30 $149.00
OXa53476	XM_012966466.2 Latest version!	Xenopus tropicalis secretory carrier membrane protein 5 gene 1 (scamp5.1), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

scamp5.1 ( NM_001007954.1 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> NP_001007955.1 Xenopus tropicalis secretory carrier membrane protein 5 gene 1 (scamp5.1), mRNA.

Price & Availability↑

CloneID	OXa00478
Clone ID Related Accession (Same CDS sequence)	XM_012966465.3 , NM_001007954.1
Accession Version	NM_001007954.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 690bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-22
Organism	Xenopus tropicalis(tropical clawed frog)
Product	secretory carrier-associated membrane protein 5
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC080466.1. ##Evidence-Data-START## CDS exon combination :: BC080466.1 [ECO:0000331] RNAseq introns :: mixed/partial sample support SAMD00028290, SAMD00028291 [ECO:0000350] ##Evidence-Data-END##

ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT 
TTCCACCAAG ATTTTGAGAA TGACATCCCA GACCTACATC GGACAACTTG CAAGCGTCTC 
TACTCCCTAT GGATGTTGAA TAGCATCACT CTGGGCGTGA ATCTTATTGG CTGCTTGGCG 
TGGATGATTG GAGGAGGCGG CGCCATTAAC TTTGGCCTTG CAATTCTGTG GGTCATCCTC 
TTTACACCCT GCTCCTATGT CTGCTGGTTC AGACCAGCTT ACAAAGCTTT CAAGACAGAC 
AGCTCATTTA ATTTCATGGC TTTCTTCTTC ACATTTTCTG CTCAGCTGGT GATCAGTATA 
ATCCAAGCTG TTGGCATTCC AGGCTGGGGT GTCTGTGGCT GGATTGCTAC AGTCGGCTTC 
TTTGGCACAA GTGTTGGTGC TGCAGTGGTA ATGCTGTTCC CAACCATCTT GTTTACTGCT 
GTGGCTGTCC TCTCTTTTGT GGCACTAACT AAGGTTCATA GGTTTTACCG AGGTGCAGGA 
GGTAGCCTTA GCAAGGCACA AGAAGAATGG ACGACGGGAG CCTGGAAGAA TCCTCATGTA 
CAGCAGGCAG CTCAGAATGC TGCACAAGGT GCCATGTCGC ATAACGACCC TCAGTATTCA 
GCAACACCAA ATTATGGCTA CTCTAACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001007955.1
CDS	126..815
Translation	MAEKANNFPPLPRFIPLKPCFHQDFENDIPDLHRTTCKRLYSLWMLNSITLGVNLIGCLAWMIGGGGAINFGLAILWVILFTPCSYVCWFRPAYKAFKTDSSFNFMAFFFTFSAQLVISIIQAVGIPGWGVCGWIATVGFFGTSVGAAVVMLFPTILFTAVAVLSFVALTKVHRFYRGAGGSLSKAQEEWTTGAWKNPHVQQAAQNAAQGAMSHNDPQYSATPNYGYSN

Target ORF information:

RefSeq Version	NM_001007954.1
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis secretory carrier membrane protein 5 gene 1 (scamp5.1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001007954.1

ORF Insert Sequence:

ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT 
TTCCACCAAG ATTTTGAGAA TGACATCCCA GACCTACATC GGACAACTTG CAAGCGTCTC 
TACTCCCTAT GGATGTTGAA TAGCATCACT CTGGGCGTGA ATCTTATTGG CTGCTTGGCG 
TGGATGATTG GAGGAGGCGG CGCCATTAAC TTTGGCCTTG CAATTCTGTG GGTCATCCTC 
TTTACACCCT GCTCCTATGT CTGCTGGTTC AGACCAGCTT ACAAAGCTTT CAAGACAGAC 
AGCTCATTTA ATTTCATGGC TTTCTTCTTC ACATTTTCTG CTCAGCTGGT GATCAGTATA 
ATCCAAGCTG TTGGCATTCC AGGCTGGGGT GTCTGTGGCT GGATTGCTAC AGTCGGCTTC 
TTTGGCACAA GTGTTGGTGC TGCAGTGGTA ATGCTGTTCC CAACCATCTT GTTTACTGCT 
GTGGCTGTCC TCTCTTTTGT GGCACTAACT AAGGTTCATA GGTTTTACCG AGGTGCAGGA 
GGTAGCCTTA GCAAGGCACA AGAAGAATGG ACGACGGGAG CCTGGAAGAA TCCTCATGTA 
CAGCAGGCAG CTCAGAATGC TGCACAAGGT GCCATGTCGC ATAACGACCC TCAGTATTCA 
GCAACACCAA ATTATGGCTA CTCTAACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

scamp5.1 ( XM_012966465.2 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_012821919.1 Xenopus tropicalis secretory carrier membrane protein 5 (scamp5), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OXa26887
Clone ID Related Accession (Same CDS sequence)	XM_012966465.2 , XM_012966464.1
Accession Version	XM_012966465.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 696bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-07
Organism	Xenopus tropicalis(tropical clawed frog)
Product	secretory carrier-associated membrane protein 5 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012966465.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT 
TTCCACCAAG ATTTTGAGAA TGACATCCCA GACCTACATC GGACAACTTG CAAGCGTCTC 
TACTCCCTAT GGATGTTGAA TAGCATCACT CTGGGCGTGA ATCTTATTGG CTGCTTGGCG 
TGGATGATTG GAGGAGGCGG CGCCATTAAC TTTGGCCTTG CAATTCTGTG GGTCATCCTC 
TTTACACCCT GCTCCTATGT CTGCTGGTTC AGACCAGCTT ACAAAGCTTT CAAGACAGAC 
AGCTCATTTA ATTTCATGGC TTTCTTCTTC ACATTTTCTG CTCAGCTGGT GATCAGTATA 
ATCCAAGCTG TTGGCATTCC AGGCTGGGGT GTCTGTGGCT GGATTGCTAC AGTCGGCTTC 
TTTGGCACAA GTGTTGGTGC TGCAGTGGTA ATGCTGTTCC CAACCATCTT GTTTACTGCT 
GTGGCTGTCC TCTCTTTTGT GGCACTAACT AAGGTTCATA GGTTTTACCG AGGTGCAGGA 
GGTAGCCTTA GCAAGGCACA AGAAGAATGG ACGACGGGAG CCTGGAAGAA TCCTCATGTA 
CAGCAGGCAG CTCAGAATGC TGCACAAGGT GCCATGTCGC ATAACGACCC TCAGTATTCA 
GCAACACCAA ATTATGGCTA CTCTAACCAA ATGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012821919.1
CDS	146..841
Translation	MAEKANNFPPLPRFIPLKPCFHQDFENDIPDLHRTTCKRLYSLWMLNSITLGVNLIGCLAWMIGGGGAINFGLAILWVILFTPCSYVCWFRPAYKAFKTDSSFNFMAFFFTFSAQLVISIIQAVGIPGWGVCGWIATVGFFGTSVGAAVVMLFPTILFTAVAVLSFVALTKVHRFYRGAGGSLSKAQEEWTTGAWKNPHVQQAAQNAAQGAMSHNDPQYSATPNYGYSNQM

Target ORF information:

RefSeq Version	XM_012966465.2
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis secretory carrier membrane protein 5 (scamp5), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012966465.2

ORF Insert Sequence:

ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT 
TTCCACCAAG ATTTTGAGAA TGACATCCCA GACCTACATC GGACAACTTG CAAGCGTCTC 
TACTCCCTAT GGATGTTGAA TAGCATCACT CTGGGCGTGA ATCTTATTGG CTGCTTGGCG 
TGGATGATTG GAGGAGGCGG CGCCATTAAC TTTGGCCTTG CAATTCTGTG GGTCATCCTC 
TTTACACCCT GCTCCTATGT CTGCTGGTTC AGACCAGCTT ACAAAGCTTT CAAGACAGAC 
AGCTCATTTA ATTTCATGGC TTTCTTCTTC ACATTTTCTG CTCAGCTGGT GATCAGTATA 
ATCCAAGCTG TTGGCATTCC AGGCTGGGGT GTCTGTGGCT GGATTGCTAC AGTCGGCTTC 
TTTGGCACAA GTGTTGGTGC TGCAGTGGTA ATGCTGTTCC CAACCATCTT GTTTACTGCT 
GTGGCTGTCC TCTCTTTTGT GGCACTAACT AAGGTTCATA GGTTTTACCG AGGTGCAGGA 
GGTAGCCTTA GCAAGGCACA AGAAGAATGG ACGACGGGAG CCTGGAAGAA TCCTCATGTA 
CAGCAGGCAG CTCAGAATGC TGCACAAGGT GCCATGTCGC ATAACGACCC TCAGTATTCA 
GCAACACCAA ATTATGGCTA CTCTAACCAA ATGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

scamp5.1 ( XM_012966464.1 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_012821918.1 Xenopus tropicalis secretory carrier membrane protein 5 (scamp5), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OXa26887
Clone ID Related Accession (Same CDS sequence)	XM_012966465.2 , XM_012966464.1
Accession Version	XM_012966464.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 696bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-07
Organism	Xenopus tropicalis(tropical clawed frog)
Product	secretory carrier-associated membrane protein 5 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT 
TTCCACCAAG ATTTTGAGAA TGACATCCCA GACCTACATC GGACAACTTG CAAGCGTCTC 
TACTCCCTAT GGATGTTGAA TAGCATCACT CTGGGCGTGA ATCTTATTGG CTGCTTGGCG 
TGGATGATTG GAGGAGGCGG CGCCATTAAC TTTGGCCTTG CAATTCTGTG GGTCATCCTC 
TTTACACCCT GCTCCTATGT CTGCTGGTTC AGACCAGCTT ACAAAGCTTT CAAGACAGAC 
AGCTCATTTA ATTTCATGGC TTTCTTCTTC ACATTTTCTG CTCAGCTGGT GATCAGTATA 
ATCCAAGCTG TTGGCATTCC AGGCTGGGGT GTCTGTGGCT GGATTGCTAC AGTCGGCTTC 
TTTGGCACAA GTGTTGGTGC TGCAGTGGTA ATGCTGTTCC CAACCATCTT GTTTACTGCT 
GTGGCTGTCC TCTCTTTTGT GGCACTAACT AAGGTTCATA GGTTTTACCG AGGTGCAGGA 
GGTAGCCTTA GCAAGGCACA AGAAGAATGG ACGACGGGAG CCTGGAAGAA TCCTCATGTA 
CAGCAGGCAG CTCAGAATGC TGCACAAGGT GCCATGTCGC ATAACGACCC TCAGTATTCA 
GCAACACCAA ATTATGGCTA CTCTAACCAA ATGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012821918.1
CDS	172..867
Translation	MAEKANNFPPLPRFIPLKPCFHQDFENDIPDLHRTTCKRLYSLWMLNSITLGVNLIGCLAWMIGGGGAINFGLAILWVILFTPCSYVCWFRPAYKAFKTDSSFNFMAFFFTFSAQLVISIIQAVGIPGWGVCGWIATVGFFGTSVGAAVVMLFPTILFTAVAVLSFVALTKVHRFYRGAGGSLSKAQEEWTTGAWKNPHVQQAAQNAAQGAMSHNDPQYSATPNYGYSNQM

Target ORF information:

RefSeq Version	XM_012966464.1
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis secretory carrier membrane protein 5 (scamp5), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012966464.1

ORF Insert Sequence:

ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT 
TTCCACCAAG ATTTTGAGAA TGACATCCCA GACCTACATC GGACAACTTG CAAGCGTCTC 
TACTCCCTAT GGATGTTGAA TAGCATCACT CTGGGCGTGA ATCTTATTGG CTGCTTGGCG 
TGGATGATTG GAGGAGGCGG CGCCATTAAC TTTGGCCTTG CAATTCTGTG GGTCATCCTC 
TTTACACCCT GCTCCTATGT CTGCTGGTTC AGACCAGCTT ACAAAGCTTT CAAGACAGAC 
AGCTCATTTA ATTTCATGGC TTTCTTCTTC ACATTTTCTG CTCAGCTGGT GATCAGTATA 
ATCCAAGCTG TTGGCATTCC AGGCTGGGGT GTCTGTGGCT GGATTGCTAC AGTCGGCTTC 
TTTGGCACAA GTGTTGGTGC TGCAGTGGTA ATGCTGTTCC CAACCATCTT GTTTACTGCT 
GTGGCTGTCC TCTCTTTTGT GGCACTAACT AAGGTTCATA GGTTTTACCG AGGTGCAGGA 
GGTAGCCTTA GCAAGGCACA AGAAGAATGG ACGACGGGAG CCTGGAAGAA TCCTCATGTA 
CAGCAGGCAG CTCAGAATGC TGCACAAGGT GCCATGTCGC ATAACGACCC TCAGTATTCA 
GCAACACCAA ATTATGGCTA CTCTAACCAA ATGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

scamp5.1 ( XM_012966466.1 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_012821920.1 Xenopus tropicalis secretory carrier membrane protein 5 (scamp5), transcript variant X3, mRNA.

Price & Availability↑

CloneID	OXa26888
Clone ID Related Accession (Same CDS sequence)	XM_012966466.1
Accession Version	XM_012966466.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 588bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-07
Organism	Xenopus tropicalis(tropical clawed frog)
Product	secretory carrier-associated membrane protein 5 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT 
TTCCACCAAG ATTTTGAGAA TGACATCCCA GACCTACATC GGACAACTTG CAAGCGTCTC 
TACTCCCTAT GGATGTTGAA TAGCATCACT CTGGGCGTGA ATCTTATTGG CTGCTTGGCG 
TGGATGATTG GAGGAGGCGG CGCCATTAAC TTTGGCCTTG CAATTCTGTG GGTCATCCTC 
TTTACACCCT GCTCCTATGT CTGCTGGTTC AGACCAGCTT ACAAAGCTTT CAAGACAGAC 
AGCTCATTTA ATTTCATGGC TTTCTTCTTC ACATTTTCTG CTCAGCTGGT GATCAGTATA 
ATCCAAGCTG TTGGCATTCC AGGCTGGGGT GTCTGGTTCA TAGGTTTTAC CGAGGTGCAG 
GAGGTAGCCT TAGCAAGGCA CAAGAAGAAT GGACGACGGG AGCCTGGAAG AATCCTCATG 
TACAGCAGGC AGCTCAGAAT GCTGCACAAG GTGCCATGTC GCATAACGAC CCTCAGTATT 
CAGCAACACC AAATTATGGC TACTCTAACC AAATGTGAGG CTGTTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012821920.1
CDS	191..778
Translation	MAEKANNFPPLPRFIPLKPCFHQDFENDIPDLHRTTCKRLYSLWMLNSITLGVNLIGCLAWMIGGGGAINFGLAILWVILFTPCSYVCWFRPAYKAFKTDSSFNFMAFFFTFSAQLVISIIQAVGIPGWGVWFIGFTEVQEVALARHKKNGRREPGRILMYSRQLRMLHKVPCRITTLSIQQHQIMATLTKCEAV

Target ORF information:

RefSeq Version	XM_012966466.1
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis secretory carrier membrane protein 5 (scamp5), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012966466.1

ORF Insert Sequence:

ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT 
TTCCACCAAG ATTTTGAGAA TGACATCCCA GACCTACATC GGACAACTTG CAAGCGTCTC 
TACTCCCTAT GGATGTTGAA TAGCATCACT CTGGGCGTGA ATCTTATTGG CTGCTTGGCG 
TGGATGATTG GAGGAGGCGG CGCCATTAAC TTTGGCCTTG CAATTCTGTG GGTCATCCTC 
TTTACACCCT GCTCCTATGT CTGCTGGTTC AGACCAGCTT ACAAAGCTTT CAAGACAGAC 
AGCTCATTTA ATTTCATGGC TTTCTTCTTC ACATTTTCTG CTCAGCTGGT GATCAGTATA 
ATCCAAGCTG TTGGCATTCC AGGCTGGGGT GTCTGGTTCA TAGGTTTTAC CGAGGTGCAG 
GAGGTAGCCT TAGCAAGGCA CAAGAAGAAT GGACGACGGG AGCCTGGAAG AATCCTCATG 
TACAGCAGGC AGCTCAGAAT GCTGCACAAG GTGCCATGTC GCATAACGAC CCTCAGTATT 
CAGCAACACC AAATTATGGC TACTCTAACC AAATGTGAGG CTGTTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

scamp5.1 ( XM_012966465.3 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_012821919.2 Xenopus tropicalis secretory carrier membrane protein 5 gene 1 (scamp5.1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OXa00478
Clone ID Related Accession (Same CDS sequence)	XM_012966465.3 , NM_001007954.1
Accession Version	XM_012966465.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 690bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-17
Organism	Xenopus tropicalis(tropical clawed frog)
Product	secretory carrier-associated membrane protein 5 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012966465.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT 
TTCCACCAAG ATTTTGAGAA TGACATCCCA GACCTACATC GGACAACTTG CAAGCGTCTC 
TACTCCCTAT GGATGTTGAA TAGCATCACT CTGGGCGTGA ATCTTATTGG CTGCTTGGCG 
TGGATGATTG GAGGAGGCGG CGCCATTAAC TTTGGCCTTG CAATTCTGTG GGTCATCCTC 
TTTACACCCT GCTCCTATGT CTGCTGGTTC AGACCAGCTT ACAAAGCTTT CAAGACAGAC 
AGCTCATTTA ATTTCATGGC TTTCTTCTTC ACATTTTCTG CTCAGCTGGT GATCAGTATA 
ATCCAAGCTG TTGGCATTCC AGGCTGGGGT GTCTGTGGCT GGATTGCTAC AGTCGGCTTC 
TTTGGCACAA GTGTTGGTGC TGCAGTGGTA ATGCTGTTCC CAACCATCTT GTTTACTGCT 
GTGGCTGTCC TCTCTTTTGT GGCACTAACT AAGGTTCATA GGTTTTACCG AGGTGCAGGA 
GGTAGCCTTA GCAAGGCACA AGAAGAATGG ACGACGGGAG CCTGGAAGAA TCCTCATGTA 
CAGCAGGCAG CTCAGAATGC TGCACAAGGT GCCATGTCGC ATAACGACCC TCAGTATTCA 
GCAACACCAA ATTATGGCTA CTCTAACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012821919.2
CDS	146..835
Translation	MAEKANNFPPLPRFIPLKPCFHQDFENDIPDLHRTTCKRLYSLWMLNSITLGVNLIGCLAWMIGGGGAINFGLAILWVILFTPCSYVCWFRPAYKAFKTDSSFNFMAFFFTFSAQLVISIIQAVGIPGWGVCGWIATVGFFGTSVGAAVVMLFPTILFTAVAVLSFVALTKVHRFYRGAGGSLSKAQEEWTTGAWKNPHVQQAAQNAAQGAMSHNDPQYSATPNYGYSN

Target ORF information:

RefSeq Version	XM_012966465.3
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis secretory carrier membrane protein 5 gene 1 (scamp5.1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012966465.3

ORF Insert Sequence:

ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT 
TTCCACCAAG ATTTTGAGAA TGACATCCCA GACCTACATC GGACAACTTG CAAGCGTCTC 
TACTCCCTAT GGATGTTGAA TAGCATCACT CTGGGCGTGA ATCTTATTGG CTGCTTGGCG 
TGGATGATTG GAGGAGGCGG CGCCATTAAC TTTGGCCTTG CAATTCTGTG GGTCATCCTC 
TTTACACCCT GCTCCTATGT CTGCTGGTTC AGACCAGCTT ACAAAGCTTT CAAGACAGAC 
AGCTCATTTA ATTTCATGGC TTTCTTCTTC ACATTTTCTG CTCAGCTGGT GATCAGTATA 
ATCCAAGCTG TTGGCATTCC AGGCTGGGGT GTCTGTGGCT GGATTGCTAC AGTCGGCTTC 
TTTGGCACAA GTGTTGGTGC TGCAGTGGTA ATGCTGTTCC CAACCATCTT GTTTACTGCT 
GTGGCTGTCC TCTCTTTTGT GGCACTAACT AAGGTTCATA GGTTTTACCG AGGTGCAGGA 
GGTAGCCTTA GCAAGGCACA AGAAGAATGG ACGACGGGAG CCTGGAAGAA TCCTCATGTA 
CAGCAGGCAG CTCAGAATGC TGCACAAGGT GCCATGTCGC ATAACGACCC TCAGTATTCA 
GCAACACCAA ATTATGGCTA CTCTAACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

scamp5.1 ( XM_018092046.1 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_017947535.1 Xenopus tropicalis secretory carrier membrane protein 5 (scamp5), transcript variant X4, mRNA.

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CloneID	OXa43102
Clone ID Related Accession (Same CDS sequence)	XM_018092046.1
Accession Version	XM_018092046.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 564bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-07
Organism	Xenopus tropicalis(tropical clawed frog)
Product	secretory carrier-associated membrane protein 5 isoform X3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTTGAATA GCATCACTCT GGGCGTGAAT CTTATTGGCT GCTTGGCGTG GATGATTGGA 
GGAGGCGGCG CCATTAACTT TGGCCTTGCA ATTCTGTGGG TCATCCTCTT TACACCCTGC 
TCCTATGTCT GCTGGTTCAG ACCAGCTTAC AAAGCTTTCA AGACAGACAG CTCATTTAAT 
TTCATGGCTT TCTTCTTCAC ATTTTCTGCT CAGCTGGTGA TCAGTATAAT CCAAGCTGTT 
GGCATTCCAG GCTGGGGTGT CTGTGGCTGG ATTGCTACAG TCGGCTTCTT TGGCACAAGT 
GTTGGTGCTG CAGTGGTAAT GCTGTTCCCA ACCATCTTGT TTACTGCTGT GGCTGTCCTC 
TCTTTTGTGG CACTAACTAA GGTTCATAGG TTTTACCGAG GTGCAGGAGG TAGCCTTAGC 
AAGGCACAAG AAGAATGGAC GACGGGAGCC TGGAAGAATC CTCATGTACA GCAGGCAGCT 
CAGAATGCTG CACAAGGTGC CATGTCGCAT AACGACCCTC AGTATTCAGC AACACCAAAT 
TATGGCTACT CTAACCAAAT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017947535.1
CDS	240..803
Translation	MLNSITLGVNLIGCLAWMIGGGGAINFGLAILWVILFTPCSYVCWFRPAYKAFKTDSSFNFMAFFFTFSAQLVISIIQAVGIPGWGVCGWIATVGFFGTSVGAAVVMLFPTILFTAVAVLSFVALTKVHRFYRGAGGSLSKAQEEWTTGAWKNPHVQQAAQNAAQGAMSHNDPQYSATPNYGYSNQM

Target ORF information:

RefSeq Version	XM_018092046.1
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis secretory carrier membrane protein 5 (scamp5), transcript variant X4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_018092046.1

ORF Insert Sequence:

ATGTTGAATA GCATCACTCT GGGCGTGAAT CTTATTGGCT GCTTGGCGTG GATGATTGGA 
GGAGGCGGCG CCATTAACTT TGGCCTTGCA ATTCTGTGGG TCATCCTCTT TACACCCTGC 
TCCTATGTCT GCTGGTTCAG ACCAGCTTAC AAAGCTTTCA AGACAGACAG CTCATTTAAT 
TTCATGGCTT TCTTCTTCAC ATTTTCTGCT CAGCTGGTGA TCAGTATAAT CCAAGCTGTT 
GGCATTCCAG GCTGGGGTGT CTGTGGCTGG ATTGCTACAG TCGGCTTCTT TGGCACAAGT 
GTTGGTGCTG CAGTGGTAAT GCTGTTCCCA ACCATCTTGT TTACTGCTGT GGCTGTCCTC 
TCTTTTGTGG CACTAACTAA GGTTCATAGG TTTTACCGAG GTGCAGGAGG TAGCCTTAGC 
AAGGCACAAG AAGAATGGAC GACGGGAGCC TGGAAGAATC CTCATGTACA GCAGGCAGCT 
CAGAATGCTG CACAAGGTGC CATGTCGCAT AACGACCCTC AGTATTCAGC AACACCAAAT 
TATGGCTACT CTAACCAAAT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

scamp5.1 ( XM_012966466.2 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_012821920.1 Xenopus tropicalis secretory carrier membrane protein 5 gene 1 (scamp5.1), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OXa53476
Clone ID Related Accession (Same CDS sequence)	XM_012966466.2
Accession Version	XM_012966466.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 588bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-17
Organism	Xenopus tropicalis(tropical clawed frog)
Product	secretory carrier-associated membrane protein 5 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012966466.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT 
TTCCACCAAG ATTTTGAGAA TGACATCCCA GACCTACATC GGACAACTTG CAAGCGTCTC 
TACTCCCTAT GGATGTTGAA TAGCATCACT CTGGGCGTGA ATCTTATTGG CTGCTTGGCG 
TGGATGATTG GAGGAGGCGG CGCCATTAAC TTTGGCCTTG CAATTCTGTG GGTCATCCTC 
TTTACACCCT GCTCCTATGT CTGCTGGTTC AGACCAGCTT ACAAAGCTTT CAAGACAGAC 
AGCTCATTTA ATTTCATGGC TTTCTTCTTC ACATTTTCTG CTCAGCTGGT GATCAGTATA 
ATCCAAGCTG TTGGCATTCC AGGCTGGGGT GTCTGGTTCA TAGGTTTTAC CGAGGTGCAG 
GAGGTAGCCT TAGCAAGGCA CAAGAAGAAT GGACGACGGG AGCCTGGAAG AATCCTCATG 
TACAGCAGGC AGCTCAGAAT GCTGCACAAG GTGCCATGTC GCATAACGAC CCTCAGTATT 
CAGCAACACC AAATTATGGC TACTCTAACT AAATGTGAGG CTGTTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012821920.1
CDS	151..738
Translation	MAEKANNFPPLPRFIPLKPCFHQDFENDIPDLHRTTCKRLYSLWMLNSITLGVNLIGCLAWMIGGGGAINFGLAILWVILFTPCSYVCWFRPAYKAFKTDSSFNFMAFFFTFSAQLVISIIQAVGIPGWGVWFIGFTEVQEVALARHKKNGRREPGRILMYSRQLRMLHKVPCRITTLSIQQHQIMATLTKCEAV

Target ORF information:

RefSeq Version	XM_012966466.2
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis secretory carrier membrane protein 5 gene 1 (scamp5.1), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012966466.2

ORF Insert Sequence:

ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT 
TTCCACCAAG ATTTTGAGAA TGACATCCCA GACCTACATC GGACAACTTG CAAGCGTCTC 
TACTCCCTAT GGATGTTGAA TAGCATCACT CTGGGCGTGA ATCTTATTGG CTGCTTGGCG 
TGGATGATTG GAGGAGGCGG CGCCATTAAC TTTGGCCTTG CAATTCTGTG GGTCATCCTC 
TTTACACCCT GCTCCTATGT CTGCTGGTTC AGACCAGCTT ACAAAGCTTT CAAGACAGAC 
AGCTCATTTA ATTTCATGGC TTTCTTCTTC ACATTTTCTG CTCAGCTGGT GATCAGTATA 
ATCCAAGCTG TTGGCATTCC AGGCTGGGGT GTCTGGTTCA TAGGTTTTAC CGAGGTGCAG 
GAGGTAGCCT TAGCAAGGCA CAAGAAGAAT GGACGACGGG AGCCTGGAAG AATCCTCATG 
TACAGCAGGC AGCTCAGAAT GCTGCACAAG GTGCCATGTC GCATAACGAC CCTCAGTATT 
CAGCAACACC AAATTATGGC TACTCTAACT AAATGTGAGG CTGTTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
Klein SL,Strausberg RL,Wagner L,Pontius J,Clifton SW,Richardson P

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scamp5.1 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

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ORF Insert Sequence:

Target ORF information:

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Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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