Gene Symbol | scamp5.1 |
Entrez Gene ID | 493330 |
Full Name | secretory carrier membrane protein 5 |
Synonyms | scamp5 |
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
ORF » Species Summary » Xenopus tropicalis » scamp5.1 cDNA ORF clone
Gene Symbol | scamp5.1 |
Entrez Gene ID | 493330 |
Full Name | secretory carrier membrane protein 5 |
Synonyms | scamp5 |
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
mRNA | Protein | Name |
---|---|---|
XM_012966465.2 | XP_012821919.1 | secretory carrier-associated membrane protein 5 isoform X1 |
XM_012966466.1 | XP_012821920.1 | secretory carrier-associated membrane protein 5 isoform X2 |
XM_012966465.3 | XP_012821919.2 | secretory carrier-associated membrane protein 5 isoform X1 |
XM_012966466.2 | XP_012821920.1 | secretory carrier-associated membrane protein 5 isoform X2 |
XM_018092046.1 | XP_017947535.1 | secretory carrier-associated membrane protein 5 isoform X3 |
XM_012966464.1 | XP_012821918.1 | secretory carrier-associated membrane protein 5 isoform X1 |
NM_001007954.1 | NP_001007955.1 | secretory carrier-associated membrane protein 5 |
Gallus gallus (chicken) | SCAMP5 | XP_424061.3 |
Homo sapiens (human) | SCAMP5 | NP_620417.1 |
Danio rerio (zebrafish) | scamp5a | NP_991110.1 |
Xenopus tropicalis (tropical clawed frog) | scamp4 | NP_001072492.1 |
Mus musculus (house mouse) | Scamp5 | NP_064666.1 |
Xenopus tropicalis (tropical clawed frog) | scamp5 | NP_001007955.1 |
Pan troglodytes (chimpanzee) | SCAMP5 | XP_003314836.1 |
Bos taurus (cattle) | SCAMP5 | NP_001160037.1 |
SCAMP5 | XP_001099073.1 | |
Canis lupus familiaris (dog) | SCAMP5 | XP_535545.2 |
Rattus norvegicus (Norway rat) | Scamp5 | NP_113914.1 |
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following scamp5.1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the scamp5.1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OXa00478 | |
Clone ID Related Accession (Same CDS sequence) | XM_012966465.3 , NM_001007954.1 | |
Accession Version | NM_001007954.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 690bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-22 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | secretory carrier-associated membrane protein 5 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC080466.1. ##Evidence-Data-START## CDS exon combination :: BC080466.1 [ECO:0000331] RNAseq introns :: mixed/partial sample support SAMD00028290, SAMD00028291 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001007955.1 |
CDS | 126..815 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001007954.1 |
1 | ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa26887 | |
Clone ID Related Accession (Same CDS sequence) | XM_012966465.2 , XM_012966464.1 | |
Accession Version | XM_012966465.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 696bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | secretory carrier-associated membrane protein 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012966465.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012821919.1 |
CDS | 146..841 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012966465.2 |
1 | ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa26887 | |
Clone ID Related Accession (Same CDS sequence) | XM_012966465.2 , XM_012966464.1 | |
Accession Version | XM_012966464.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 696bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | secretory carrier-associated membrane protein 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012821918.1 |
CDS | 172..867 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012966464.1 |
1 | ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa26888 | |
Clone ID Related Accession (Same CDS sequence) | XM_012966466.1 | |
Accession Version | XM_012966466.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 588bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | secretory carrier-associated membrane protein 5 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012821920.1 |
CDS | 191..778 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012966466.1 |
1 | ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa00478 | |
Clone ID Related Accession (Same CDS sequence) | XM_012966465.3 , NM_001007954.1 | |
Accession Version | XM_012966465.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 690bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | secretory carrier-associated membrane protein 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012966465.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012821919.2 |
CDS | 146..835 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012966465.3 |
1 | ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa43102 | |
Clone ID Related Accession (Same CDS sequence) | XM_018092046.1 | |
Accession Version | XM_018092046.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 564bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | secretory carrier-associated membrane protein 5 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGAATA GCATCACTCT GGGCGTGAAT CTTATTGGCT GCTTGGCGTG GATGATTGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017947535.1 |
CDS | 240..803 |
Translation |
Target ORF information:
Target ORF information:
|
XM_018092046.1 |
1 | ATGTTGAATA GCATCACTCT GGGCGTGAAT CTTATTGGCT GCTTGGCGTG GATGATTGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa53476 | |
Clone ID Related Accession (Same CDS sequence) | XM_012966466.2 | |
Accession Version | XM_012966466.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 588bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | secretory carrier-associated membrane protein 5 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012966466.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012821920.1 |
CDS | 151..738 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012966466.2 |
1 | ATGGCTGAGA AAGCAAACAA CTTTCCTCCA CTTCCTCGTT TTATACCACT CAAGCCATGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. |