Gene Symbol | LOC448367 |
Entrez Gene ID | 448367 |
Full Name | ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen) |
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
ORF » Species Summary » Xenopus tropicalis » LOC448367 cDNA ORF clone
Gene Symbol | LOC448367 |
Entrez Gene ID | 448367 |
Full Name | ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen) |
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
mRNA | Protein | Name |
---|---|---|
XM_031890352.1 | XP_031746212.1 | ficolin-like isoform X3 |
XM_031890351.1 | XP_031746211.1 | ficolin-like isoform X2 |
XM_012969759.2 | XP_012825213.1 | ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen) isoform X1 |
NM_001006717.2 | NP_001006718.1 | ficolin-like precursor |
XM_031890349.1 | XP_031746209.1 | ficolin-like isoform X1 |
Xenopus tropicalis (tropical clawed frog) | col11a2 | NP_001005799.1 |
Xenopus tropicalis (tropical clawed frog) | fcn1 | NP_001004935.1 |
Xenopus tropicalis (tropical clawed frog) | fcn3 | NP_001011233.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100496532 | XP_002935134.2 |
Xenopus tropicalis (tropical clawed frog) | LOC100496379 | XP_002935133.2 |
Xenopus tropicalis (tropical clawed frog) | fcn3 | NP_001006718.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100145014 | NP_001120041.1 |
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC448367 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC448367 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OXa26546 | |
Clone ID Related Accession (Same CDS sequence) | XM_031890351.1 , XM_012969759.2 | |
Accession Version | XM_031890351.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1017bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | ficolin-like isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030684.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAATTT CTCTGCTAAA TACATTCCTT CTGGTTCTTG CCGGGATCAC AGTTTCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_031746211.1 |
CDS | 215..1231 |
Translation |
Target ORF information:
Target ORF information:
|
XM_031890351.1 |
1 | ATGGGAATTT CTCTGCTAAA TACATTCCTT CTGGTTCTTG CCGGGATCAC AGTTTCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa63610 | |
Clone ID Related Accession (Same CDS sequence) | XM_031890349.1 | |
Accession Version | XM_031890349.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1062bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | ficolin-like isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030684.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGCCTCA ACTGCGCAGT GTATCCATCA CTGAGAGAGA GTCAGCCTCG GGAATCCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_031746209.1 |
CDS | 41..1102 |
Translation |
Target ORF information:
Target ORF information:
|
XM_031890349.1 |
1 | ATGCGCCTCA ACTGCGCAGT GTATCCATCA CTGAGAGAGA GTCAGCCTCG GGAATCCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa63611 | |
Clone ID Related Accession (Same CDS sequence) | XM_031890352.1 | |
Accession Version | XM_031890352.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 939bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | ficolin-like isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030684.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAATTT CTCTGCTAAA TACATTCCTT CTGGTTCTTG CCGGGATCAC AGTTTCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_031746212.1 |
CDS | 215..1153 |
Translation |
Target ORF information:
Target ORF information:
|
XM_031890352.1 |
1 | ATGGGAATTT CTCTGCTAAA TACATTCCTT CTGGTTCTTG CCGGGATCAC AGTTTCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa21129 | |
Clone ID Related Accession (Same CDS sequence) | NM_001006717.2 | |
Accession Version | NM_001006717.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1017bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-21 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | ficolin-like precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC075449.1. On Aug 31, 2012 this sequence version replaced NM_001006717.1. ##Evidence-Data-START## Transcript exon combination :: BC075449.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN02862986, SAMN02862987 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGAATTT CTCTGCTAAA TACATTCCTT CTGGTTCTTG CCGGGATCAC AGTTTCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001006718.1 |
CDS | 175..1191 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001006717.2 |
1 | ATGGGAATTT CTCTGCTAAA TACATTCCTT CTGGTTCTTG CCGGGATCAC AGTTTCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa26546 | |
Clone ID Related Accession (Same CDS sequence) | XM_031890351.1 , XM_012969759.2 | |
Accession Version | XM_012969759.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1017bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen) isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_016683412.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012969759.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAATTT CTCTGCTAAA TACATTCCTT CTGGTTCTTG CCGGGATCAC AGTTTCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012825213.1 |
CDS | 121..1137 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012969759.2 |
1 | ATGGGAATTT CTCTGCTAAA TACATTCCTT CTGGTTCTTG CCGGGATCAC AGTTTCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. |