ORF » Species Summary » Trichoderma atroviride IMI 206040 » TRIATDRAFT_143172 cDNA ORF clone

TRIATDRAFT_143172 cDNA ORF clone, Trichoderma atroviride IMI 206040

The following TRIATDRAFT_143172 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TRIATDRAFT_143172 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTr00305 XM_014082361.1
Latest version!		 Trichoderma atroviride IMI 206040 hypothetical protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    TRIATDRAFT_143172 ( XM_014082361.1 ) cDNA ORF clone, Trichoderma atroviride IMI 206040 -> XP_013937836.1 Trichoderma atroviride IMI 206040 hypothetical protein partial mRNA.
    Price & Availability↑
    CloneID OTr00305
    Clone ID Related Accession (Same CDS sequence) XM_014082361.1
    Accession Version XM_014082361.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1524bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-09-13
    Organism Trichoderma atroviride IMI 206040
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_014013627). ##Metadata-START## Organism Display Name :: Trichoderma atroviride IMI 206040 GOLD Stamp ID :: Gi01368 ##Metadata-END## COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGTATTGGG TGCAACGGTT CACCTACCTG TCGGTGCCGG TGCTATTCAT CATCTTCATT 
    GCTACCTACC TCCCCGTTAT CCTCGATCCG ACAACTAGAG GACCGGAGAG TCGCGCTCGT 
    GATCGACTCT GGGTCAGCAG TAGCCCATAT TTCTGGGATC GCCAAGCATG TCGATGGATA 
    GGCTTGTGTG GTCTGCACCA CCTGCGAAGG GACCCTGCCG TGCTCCCGCC CATATTCGAA 
    GAAGACCCCG AAGACGAGCT GAGAATAGAA CTGCGAAAGC GAATGGACGT TACATGGGAG 
    GAAGATGCTG AACTCAACGG CCTAGGAAGC TCGAGCGCCA AGAGGGACTT GAAGAGGAAT 
    CCGCATGAGC GTCGCAAGAT CCTGAGGGAA GTCCCCCAAT ATGTCATCGA CCATGCCCCG 
    CTGGTGCACC TCTACTCTGG CGAGCAGTTT TGGCCCTCGG ACATTCGCGA GCACATTCAA 
    CACATGATTA GACTCAACCG CTTCGACAAC CGCATGGTTA CTCTTCACAG CTTGGAAGAC 
    GTGGAATCTC GACCCAAGTG GCTTCACAGC CACGATAACC TGCCAAATCC CTTTGATGAC 
    CCTGATGCTT CTATACCACC TCCCCATGGA GGTGCTCGAA GACCACATAG CGAGCCCGAC 
    ACTTGGTTTG ATACAGACAA GAAGCACCCT GTCCATCGTA TCTCGGATCC TCGGGTCAAA 
    AACAAGCCCG CATATTTCCC TACACCTAGC CCCGGCAAAG AACAACAACG AATAATTCCG 
    CGCGGCCACA AGCCAGATGC CGATGGCTAT TCCAAAGCGC CGGCCACCCT CGTTCTGGTG 
    GACAAAGGCT CGGGCATTGT TGATGCTTTC TGGTTTTTCT TTTACAGCTA TAATCTAGGG 
    CAAACCGTGC TCGGTCTACG ATTTGGCAAC CACGTGGGTG ACTGGGAGCA TTGCATGGTT 
    CGCTTCCAGA ATGGAGAACC ACGCGGCATC TTCTTCTCCG AGCATGAGGG CGGCCAGGCC 
    TACGCATGGT CGGCCATTGA AAAGCGCGGC GTGAGACCCG TCATTTACTC GGCTGTTGGC 
    TCCCATGCCA TGTATGCTCT GCCCGGCCCG CACCCTTACG TCCTGCCCTT CAAAATGCTC 
    AAAGACGTTA CCGACAAGGG TCCGTTATGG GATCCTGCAC TTAATAATTA TGCTTATTTC 
    TACGATTACA CCCTCGAGAA CCCCGAAGAC ACCATCGAGC ATGAGGATAG CATTGGAGTG 
    AAGGGACTGA CGCATGACAC TCACAGCTTC ACCCCCGCCG CGTCCAATCC GGATGCGCCG 
    ACTACGTGGC TGCACTACCA AGGCCGCTGG GGTGATGAGA CGTACACTCT AGCCGACCCT 
    CGCCAATGGC GCCTCTTTGG CCAGTACCAT TATGTTACAG GACCCAGCGG ACCCAAATTC 
    AAGAATCTCG AACGGCAAAC ATTATGCCCG GCGAGAACCT GTCGCCTACT ATATGAGATT 
    GATCCAAAGG GCACTTGGTA CTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_013937836.1
    CDS1..1524
    Translation

    Target ORF information:

    RefSeq Version XM_014082361.1
    Organism Trichoderma atroviride IMI 206040
    Definition Trichoderma atroviride IMI 206040 hypothetical protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_014082361.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGTATTGGG TGCAACGGTT CACCTACCTG TCGGTGCCGG TGCTATTCAT CATCTTCATT 
    GCTACCTACC TCCCCGTTAT CCTCGATCCG ACAACTAGAG GACCGGAGAG TCGCGCTCGT 
    GATCGACTCT GGGTCAGCAG TAGCCCATAT TTCTGGGATC GCCAAGCATG TCGATGGATA 
    GGCTTGTGTG GTCTGCACCA CCTGCGAAGG GACCCTGCCG TGCTCCCGCC CATATTCGAA 
    GAAGACCCCG AAGACGAGCT GAGAATAGAA CTGCGAAAGC GAATGGACGT TACATGGGAG 
    GAAGATGCTG AACTCAACGG CCTAGGAAGC TCGAGCGCCA AGAGGGACTT GAAGAGGAAT 
    CCGCATGAGC GTCGCAAGAT CCTGAGGGAA GTCCCCCAAT ATGTCATCGA CCATGCCCCG 
    CTGGTGCACC TCTACTCTGG CGAGCAGTTT TGGCCCTCGG ACATTCGCGA GCACATTCAA 
    CACATGATTA GACTCAACCG CTTCGACAAC CGCATGGTTA CTCTTCACAG CTTGGAAGAC 
    GTGGAATCTC GACCCAAGTG GCTTCACAGC CACGATAACC TGCCAAATCC CTTTGATGAC 
    CCTGATGCTT CTATACCACC TCCCCATGGA GGTGCTCGAA GACCACATAG CGAGCCCGAC 
    ACTTGGTTTG ATACAGACAA GAAGCACCCT GTCCATCGTA TCTCGGATCC TCGGGTCAAA 
    AACAAGCCCG CATATTTCCC TACACCTAGC CCCGGCAAAG AACAACAACG AATAATTCCG 
    CGCGGCCACA AGCCAGATGC CGATGGCTAT TCCAAAGCGC CGGCCACCCT CGTTCTGGTG 
    GACAAAGGCT CGGGCATTGT TGATGCTTTC TGGTTTTTCT TTTACAGCTA TAATCTAGGG 
    CAAACCGTGC TCGGTCTACG ATTTGGCAAC CACGTGGGTG ACTGGGAGCA TTGCATGGTT 
    CGCTTCCAGA ATGGAGAACC ACGCGGCATC TTCTTCTCCG AGCATGAGGG CGGCCAGGCC 
    TACGCATGGT CGGCCATTGA AAAGCGCGGC GTGAGACCCG TCATTTACTC GGCTGTTGGC 
    TCCCATGCCA TGTATGCTCT GCCCGGCCCG CACCCTTACG TCCTGCCCTT CAAAATGCTC 
    AAAGACGTTA CCGACAAGGG TCCGTTATGG GATCCTGCAC TTAATAATTA TGCTTATTTC 
    TACGATTACA CCCTCGAGAA CCCCGAAGAC ACCATCGAGC ATGAGGATAG CATTGGAGTG 
    AAGGGACTGA CGCATGACAC TCACAGCTTC ACCCCCGCCG CGTCCAATCC GGATGCGCCG 
    ACTACGTGGC TGCACTACCA AGGCCGCTGG GGTGATGAGA CGTACACTCT AGCCGACCCT 
    CGCCAATGGC GCCTCTTTGG CCAGTACCAT TATGTTACAG GACCCAGCGG ACCCAAATTC 
    AAGAATCTCG AACGGCAAAC ATTATGCCCG GCGAGAACCT GTCGCCTACT ATATGAGATT 
    GATCCAAAGG GCACTTGGTA CTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma.
    Genome biology12(4)R40(2011)
    Kubicek CP,Herrera-Estrella A,Seidl-Seiboth V,Martinez DA,Druzhinina IS,Thon M,Zeilinger S,Casas-Flores S,Horwitz BA,Mukherjee PK,Mukherjee M,Kredics L,Alcaraz LD,Aerts A,Antal Z,Atanasova L,Cervantes-Badillo MG,Challacombe J,Chertkov O,McCluskey K,Coulpier F,Deshpande N,von D?hren H,Ebbole DJ,Esquivel-Naranjo EU,Fekete E,Flipphi M,Glaser F,G?mez-Rodr?guez EY,Gruber S,Han C,Henrissat B,Hermosa R,Hern?ndez-O?ate M,Karaffa L,Kosti I,Le Crom S,Lindquist E,Lucas S,L?beck M,L?beck PS,Margeot A,Metz B,Misra M,Nevalainen H,Omann M,Packer N,Perrone G,Uresti-Rivera EE,Salamov A,Schmoll M,Seiboth B,Shapiro H,Sukno S,Tamayo-Ramos JA,Tisch D,Wiest A,Wilkinson HH,Zhang M,Coutinho PM,Kenerley CM,Monte E,Baker SE,Grigoriev IV


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