LOC100621126 cDNA ORF clone, Sus scrofa(pig)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC100621126
Entrez Gene ID	100621126
Full Name	UPF2, regulator of nonsense mediated mRNA decay
Gene Type	protein-coding
Organism	Sus scrofa(pig)
Genome	Chromosome: 10 Map Location: 10\|10

mRNA and Protein(s)

mRNA	Protein	Name
XM_021064994.1	XP_020920653.1	LOW QUALITY PROTEIN: regulator of nonsense transcripts 2
XM_013986743.1	XP_013842197.1	regulator of nonsense transcripts 2

Pathways from BioSystems
Gene Ontology

The following LOC100621126 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100621126 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OSe232383	XM_021064994.1 Latest version!	Sus scrofa UPF2 regulator of nonsense transcripts homolog (yeast) (UPF2), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$713.30 $1019.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC100621126 ( XM_021064994.1 ) cDNA ORF clone, Sus scrofa(pig) -> XP_020920653.1 Sus scrofa UPF2 regulator of nonsense transcripts homolog (yeast) (UPF2), mRNA.

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CloneID	OSe232383
Clone ID Related Accession (Same CDS sequence)	XM_021064994.1
Accession Version	XM_021064994.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3816bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-05-12
Organism	Sus scrofa(pig)
Product	LOW QUALITY PROTEIN: regulator of nonsense transcripts 2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010452.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END##

ATGCCAGCTG AGCGCAAAAA GCCAGCAAGT ATGGAAGAAA AAGAATCTTT ACTAAACAAC 
AAAGAAAAAG ACTGCAGTGA AAGGCGGCCA GTGAGCAGCA GGGAGAAGCC AAAAGACGAG 
ATCAAGCTTA CTGTCAAGAA GGAGGTTATT AAGGTCCCTG AAGATAAGAA GAAGAAACTA 
GAAGAAGATA AGAGGAAAAA AGAAGACAAG GAACGCAAGA AAAAAGAAGA AGAAAAGGTG 
AAGGCAGAGG AGGAATTAAA GAAAAAAGAG GAAGAANGAA AAAAGAAACA TGAAGAAGAA 
GAGAAAAAGA AGCAAGAAGA GCAGGTGAAA CGTCAGCAGG AAGAAGAGGC TGCCCAGTTG 
AAAGAGAAAG AAGAATCCCT CCAGCTTCAT CAAGAAGCTT GGGAACGCCA TCAGTTAAGG 
AAGGAACTTC GTAGCAAAAA CCAAAATGCT CCAGACAACC GACCAGAGGA AAATTTCTTC 
AGCCGACTAG ACTCAAGTTT GAAGAAAAAT ACTGCTTTTG TCAAGAAACT AAAAACTATT 
ACGGAACAAC AGAGAGACTC CTTGTCCCAT GATTTTAATG GCCTGAATTT AAGCAAATAC 
ATTGCAGAGG CTGTAGCTTC CATTGTGGAA GCAAAGCTAA AAATATCTGA TGTGAATTGT 
GCTGTGCACT TATGCTCTCT CTTTCACCAG CGCTACGCTG ACTTTGCCCC ATCACTTCTT 
CAGGTTTGGA AAAAACATTT TGAAGCAAGG AAAGAAGAGA AAACACCTAA CATTACCAAG 
CTAAGAACTG ATTTGCGTTT CATTGCAGAA TTGACAATAG TTGGGATTTT CACCGACAAG 
GAAGGTCTCT CCTTAATCTA TGAACAGCTA AAAAATATTA TTAATGCTGA TCGGGAATCC 
CATACCCATG TTTCTGTGGT GATTAGTTTT TGTCGACATT GTGGAGATGA TATTGCTGGA 
CTTGTACCAA GGAAAGTAAA GAGTGCTGCA GAGAAGTTTA ATTTGAGTTT TCCTCCTAGT 
GAGATAATTA GTCCAGAGAA ACAGCAACCT TTCCAGAATC TTTTAAAAGA GTACTTTACG 
TCTTTGACCA AACACCTGAA AAGGGACCAC AGGGAGCTAC AGAATACTGA GAGACAAAAC 
AGGCGTATTC TCCATTCTAA AGGGGAGCTA AGTGAAGATA GACATAAACA ATATGAGGAA 
TTTGCTATGT CTTATCAGAA GCTGCTGGCA AATTCTCAAT CCTTAGCAGA CCTTTTGGAT 
GAAAATATGC CAGATCTTCC TCAAGACAAA CCAACACCGG AAGAGCATGG GCCTGGAATT 
GACATATTTA CACCTGGTAA ACCTGGAGAA TATGACCTGG AAGGTGGTAT ATGGGAAGAC 
GAAGATGCTC GGAATTTTTA TGAGAACCTC ATTGATTTGA AAGCTTTTGT TCCAGCCATT 
TTATTTAAAG ATAATGAAAA AAGTTGTCTG AATAAAGAGT CCAACAAGGA TGATTCCAAA 
GAAGCAAAAG AACCTAAGGA TAATAAGGAG ATACCAAATC CTGATGATTT GGAGCTTGAG 
TTGGAGAACC TAGAAATTAA TGATGATCCG TTGGAGTTAG AGGGTGGAGA TGAAGCTGAA 
GATCTTACGA AGAAACTTCT TGATGAACAA GAACAAGAGG ATGAAGAAGC CAGCACTGGA 
TCTCATCTCA AGCTCATAGT TGATGCTTTC CTCCAGCAAT TGCCCAACTG TGTCAACCGT 
GATCTCATAG ACAAGGCAGC AATGGATTTT TGCATGAACA TGAACACGAA AGCAAATAGG 
AAGAAATTGG TGCGGGCACT CTTTATAGTT CCCAGACAAA GGTTGGATTT GCTACCATTT 
TATGCAAGAT TGGTTGCTAC ATTGCATCCC TGCATGTCTG ATGTAGCAGA GGATCTTTGT 
TCCATGCTGA GGGGGGATTT CAGATTTCAT GTACGAAAAA AGGACCAGAT CAATATTGAA 
ACAAAGAACA AAACTGTTCG ATTTATTGGA GAACTCACTA AGTTTAAGAT GTTCACAAAA 
AATGATACAC TGCATTGTTT AAAGATGCTT CTATCAGACT TCTCCCATCA CCATATTGAA 
ATGGCATGTA CCCTGCTGGA AACATGTGGA AGATTTCTTT TCAGATCTCC GGAATCTCAC 
CTGAGGACCA GTGTACTTTT GGAACAAATG ATGAGAAAGA AACAGGCGAT GCATCTCGAT 
GCAAGATATG TCACAATGGT GGAGAATGCC TATTACTACT GCAACCCGCC TCCAGCTGAA 
AAAACAGTGA AAAAGAAACG TCCTCCTCTC CAGGAATATG TCCGGAAACT TTTGTACAAG 
GATCTCTCCA AGGTTACCAC AGAGAAGGTT TTGAGACAGA TGCGAAAGTT GCCCTGGCAG 
GACCAAGAAG TGAAAGACTA TGTTATTTGT TGTATGATAA ACATCTGGAA TGTGAAGTAC 
AACAGCATTC ATTGTGTAGC CAATCTCTTG GCAGGACTAG TGCTCTATCA GGAGGATGTT 
GGAATCCATG TTGTGGACGG AGTTTTAGAA GATATCCGAC TAGGAATGGA GGTTAATCAA 
CCTAAATTTA ATCAGAGACG TATCAGCAGT GCCAAGTTCT TAGGAGAACT TTATAATTAC 
CGAATGGTGG AATCGGCTGT AATTTTTAGA ACTCTTTATT CTTTTACTTC ATTTGGGGTC 
AACCCTGATG GCTCTCCAAG TTCGCTGGAC CCGCCTGAGC ACCTTTTCAG GATTAGACTA 
GTGTGCACTA TTTTGGACAC CTGTGGCCAG TACTTTGATA GAGGATCCAG TAAACGGAAA 
CTTGATTGCT TCCTTGTGTA TTTTCAGCGT TATGTTTGGT GGAAGAAAAG TTTGGAGGTT 
TGGACAAAAG ACCATCCATT TCCTATTGAC ATAGATTACA TGATCAGTGA CACACTAGAA 
CTGCTAAGAC CAAAGATCAA ACTCTGTAAT TCTCTGGAAG AATCCATCAG GCAGGTACAA 
GACTTGGAAC GAGAATTCTT AATAAAACTA GGTCTAGTAA ATGACAAAGA CTCAAAAGAT 
TCTCTGACAG AAGGAGAAAA TCTTGAAGAG GACGAAGAAG AAGAAGAAGG AGGAGCTGAA 
ACAGAGGAAC AATCTGGAAA TGAAAGTGAA GTGAATGAGC CAGAGGAAGA GGAGGGTTCG 
GATAATGATG ATGATGAAGG AGAGGAAGAA GAGGAAGAGA ATACAGATTA CCTCACAGAT 
TCCAATAAGG AGAATGAAAC TGATGAAGAA AATACTGAGG TAATGATTAA AGGAGGGGGA 
CTGAAACACG TACCTTGTGT AGAAGATGAG GACTTCATTC AAGCTCTGGA TAAAATGATG 
CTGGAAAATC TTCAGCAACG AAGTGGCGAA TCTGTTAAGG TGCACCAACT TGATGTGGCC 
ATTCCCTTGC ATCTCAAAAG CCAGCTGAGG AAAGGGCCCC CACTCGGGGG TGGGGAAGGA 
GAGGCAGAGT CTGCAGATAC GATGCCGTTC GTTATGTTAA CCAGAAAAGG CAATAAACAG 
CAGTTTAAAA TCCTTAATGT ACCCATGTCT TCCCAACTTG CTGCAAATCA TTGGAACCAA 
CAACAGGCAG AACAAGAAGA GAGGATGAGA ATGAAAAAAC TCACACTAGA TATCAATGAA 
CGGCAAGAAC AAGAAGATTA TCAAGAGATG CTGCAGTCTC TTGCACAGCG CCCGGCTCCA 
GCAAACACCA ATCGGGAGCG GCGGCCTCGT TACCAACATC CAAAGGGAGC GCCTAACGCG 
GATCTAATCT TTAAGACTGG TGGGAGGAGA CGTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_020920653.1
CDS	295..4110
Translation	MPAERKKPASMEEKESLLNNKEKDCSERRPVSSREKPKDEIKLTVKKEVIKVPEDKKKKLEEDKRKKEDKERKKKEEEKVKAEEELKKKEEEnullKKKHEEEEKKKQEEQVKRQQEEEAAQLKEKEESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLLQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRESHTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAILFKDNEKSCLNKESNKDDSKEAKEPKDNKEIPNPDDLELELENLEINDDPLELEGGDEAEDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSKDSLTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTGGRRR

Target ORF information:

RefSeq Version	XM_021064994.1
Organism	Sus scrofa(pig)
Definition	Sus scrofa UPF2 regulator of nonsense transcripts homolog (yeast) (UPF2), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021064994.1

ORF Insert Sequence:

ATGCCAGCTG AGCGCAAAAA GCCAGCAAGT ATGGAAGAAA AAGAATCTTT ACTAAACAAC 
AAAGAAAAAG ACTGCAGTGA AAGGCGGCCA GTGAGCAGCA GGGAGAAGCC AAAAGACGAG 
ATCAAGCTTA CTGTCAAGAA GGAGGTTATT AAGGTCCCTG AAGATAAGAA GAAGAAACTA 
GAAGAAGATA AGAGGAAAAA AGAAGACAAG GAACGCAAGA AAAAAGAAGA AGAAAAGGTG 
AAGGCAGAGG AGGAATTAAA GAAAAAAGAG GAAGAANGAA AAAAGAAACA TGAAGAAGAA 
GAGAAAAAGA AGCAAGAAGA GCAGGTGAAA CGTCAGCAGG AAGAAGAGGC TGCCCAGTTG 
AAAGAGAAAG AAGAATCCCT CCAGCTTCAT CAAGAAGCTT GGGAACGCCA TCAGTTAAGG 
AAGGAACTTC GTAGCAAAAA CCAAAATGCT CCAGACAACC GACCAGAGGA AAATTTCTTC 
AGCCGACTAG ACTCAAGTTT GAAGAAAAAT ACTGCTTTTG TCAAGAAACT AAAAACTATT 
ACGGAACAAC AGAGAGACTC CTTGTCCCAT GATTTTAATG GCCTGAATTT AAGCAAATAC 
ATTGCAGAGG CTGTAGCTTC CATTGTGGAA GCAAAGCTAA AAATATCTGA TGTGAATTGT 
GCTGTGCACT TATGCTCTCT CTTTCACCAG CGCTACGCTG ACTTTGCCCC ATCACTTCTT 
CAGGTTTGGA AAAAACATTT TGAAGCAAGG AAAGAAGAGA AAACACCTAA CATTACCAAG 
CTAAGAACTG ATTTGCGTTT CATTGCAGAA TTGACAATAG TTGGGATTTT CACCGACAAG 
GAAGGTCTCT CCTTAATCTA TGAACAGCTA AAAAATATTA TTAATGCTGA TCGGGAATCC 
CATACCCATG TTTCTGTGGT GATTAGTTTT TGTCGACATT GTGGAGATGA TATTGCTGGA 
CTTGTACCAA GGAAAGTAAA GAGTGCTGCA GAGAAGTTTA ATTTGAGTTT TCCTCCTAGT 
GAGATAATTA GTCCAGAGAA ACAGCAACCT TTCCAGAATC TTTTAAAAGA GTACTTTACG 
TCTTTGACCA AACACCTGAA AAGGGACCAC AGGGAGCTAC AGAATACTGA GAGACAAAAC 
AGGCGTATTC TCCATTCTAA AGGGGAGCTA AGTGAAGATA GACATAAACA ATATGAGGAA 
TTTGCTATGT CTTATCAGAA GCTGCTGGCA AATTCTCAAT CCTTAGCAGA CCTTTTGGAT 
GAAAATATGC CAGATCTTCC TCAAGACAAA CCAACACCGG AAGAGCATGG GCCTGGAATT 
GACATATTTA CACCTGGTAA ACCTGGAGAA TATGACCTGG AAGGTGGTAT ATGGGAAGAC 
GAAGATGCTC GGAATTTTTA TGAGAACCTC ATTGATTTGA AAGCTTTTGT TCCAGCCATT 
TTATTTAAAG ATAATGAAAA AAGTTGTCTG AATAAAGAGT CCAACAAGGA TGATTCCAAA 
GAAGCAAAAG AACCTAAGGA TAATAAGGAG ATACCAAATC CTGATGATTT GGAGCTTGAG 
TTGGAGAACC TAGAAATTAA TGATGATCCG TTGGAGTTAG AGGGTGGAGA TGAAGCTGAA 
GATCTTACGA AGAAACTTCT TGATGAACAA GAACAAGAGG ATGAAGAAGC CAGCACTGGA 
TCTCATCTCA AGCTCATAGT TGATGCTTTC CTCCAGCAAT TGCCCAACTG TGTCAACCGT 
GATCTCATAG ACAAGGCAGC AATGGATTTT TGCATGAACA TGAACACGAA AGCAAATAGG 
AAGAAATTGG TGCGGGCACT CTTTATAGTT CCCAGACAAA GGTTGGATTT GCTACCATTT 
TATGCAAGAT TGGTTGCTAC ATTGCATCCC TGCATGTCTG ATGTAGCAGA GGATCTTTGT 
TCCATGCTGA GGGGGGATTT CAGATTTCAT GTACGAAAAA AGGACCAGAT CAATATTGAA 
ACAAAGAACA AAACTGTTCG ATTTATTGGA GAACTCACTA AGTTTAAGAT GTTCACAAAA 
AATGATACAC TGCATTGTTT AAAGATGCTT CTATCAGACT TCTCCCATCA CCATATTGAA 
ATGGCATGTA CCCTGCTGGA AACATGTGGA AGATTTCTTT TCAGATCTCC GGAATCTCAC 
CTGAGGACCA GTGTACTTTT GGAACAAATG ATGAGAAAGA AACAGGCGAT GCATCTCGAT 
GCAAGATATG TCACAATGGT GGAGAATGCC TATTACTACT GCAACCCGCC TCCAGCTGAA 
AAAACAGTGA AAAAGAAACG TCCTCCTCTC CAGGAATATG TCCGGAAACT TTTGTACAAG 
GATCTCTCCA AGGTTACCAC AGAGAAGGTT TTGAGACAGA TGCGAAAGTT GCCCTGGCAG 
GACCAAGAAG TGAAAGACTA TGTTATTTGT TGTATGATAA ACATCTGGAA TGTGAAGTAC 
AACAGCATTC ATTGTGTAGC CAATCTCTTG GCAGGACTAG TGCTCTATCA GGAGGATGTT 
GGAATCCATG TTGTGGACGG AGTTTTAGAA GATATCCGAC TAGGAATGGA GGTTAATCAA 
CCTAAATTTA ATCAGAGACG TATCAGCAGT GCCAAGTTCT TAGGAGAACT TTATAATTAC 
CGAATGGTGG AATCGGCTGT AATTTTTAGA ACTCTTTATT CTTTTACTTC ATTTGGGGTC 
AACCCTGATG GCTCTCCAAG TTCGCTGGAC CCGCCTGAGC ACCTTTTCAG GATTAGACTA 
GTGTGCACTA TTTTGGACAC CTGTGGCCAG TACTTTGATA GAGGATCCAG TAAACGGAAA 
CTTGATTGCT TCCTTGTGTA TTTTCAGCGT TATGTTTGGT GGAAGAAAAG TTTGGAGGTT 
TGGACAAAAG ACCATCCATT TCCTATTGAC ATAGATTACA TGATCAGTGA CACACTAGAA 
CTGCTAAGAC CAAAGATCAA ACTCTGTAAT TCTCTGGAAG AATCCATCAG GCAGGTACAA 
GACTTGGAAC GAGAATTCTT AATAAAACTA GGTCTAGTAA ATGACAAAGA CTCAAAAGAT 
TCTCTGACAG AAGGAGAAAA TCTTGAAGAG GACGAAGAAG AAGAAGAAGG AGGAGCTGAA 
ACAGAGGAAC AATCTGGAAA TGAAAGTGAA GTGAATGAGC CAGAGGAAGA GGAGGGTTCG 
GATAATGATG ATGATGAAGG AGAGGAAGAA GAGGAAGAGA ATACAGATTA CCTCACAGAT 
TCCAATAAGG AGAATGAAAC TGATGAAGAA AATACTGAGG TAATGATTAA AGGAGGGGGA 
CTGAAACACG TACCTTGTGT AGAAGATGAG GACTTCATTC AAGCTCTGGA TAAAATGATG 
CTGGAAAATC TTCAGCAACG AAGTGGCGAA TCTGTTAAGG TGCACCAACT TGATGTGGCC 
ATTCCCTTGC ATCTCAAAAG CCAGCTGAGG AAAGGGCCCC CACTCGGGGG TGGGGAAGGA 
GAGGCAGAGT CTGCAGATAC GATGCCGTTC GTTATGTTAA CCAGAAAAGG CAATAAACAG 
CAGTTTAAAA TCCTTAATGT ACCCATGTCT TCCCAACTTG CTGCAAATCA TTGGAACCAA 
CAACAGGCAG AACAAGAAGA GAGGATGAGA ATGAAAAAAC TCACACTAGA TATCAATGAA 
CGGCAAGAAC AAGAAGATTA TCAAGAGATG CTGCAGTCTC TTGCACAGCG CCCGGCTCCA 
GCAAACACCA ATCGGGAGCG GCGGCCTCGT TACCAACATC CAAAGGGAGC GCCTAACGCG 
GATCTAATCT TTAAGACTGG TGGGAGGAGA CGTTGA