| Gene Symbol | ROPN1 |
| Entrez Gene ID | 100359353 |
| Full Name | rhophilin associated tail protein 1 |
| Synonyms | ROPN1B |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
| Genome |
ORF » Species Summary » Sus scrofa » ROPN1 cDNA ORF clone
| Gene Symbol | ROPN1 |
| Entrez Gene ID | 100359353 |
| Full Name | rhophilin associated tail protein 1 |
| Synonyms | ROPN1B |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
| Genome |
| mRNA | Protein | Name |
|---|---|---|
| XM_021068368.1 | XP_020924027.1 | ropporin-1A isoform X1 |
| XM_021068369.1 | XP_020924028.1 | ropporin-1A isoform X1 |
| NM_001172369.1 | NP_001165840.1 | ropporin-1A |
Molecular cloning, sequence characterization, polymorphism and association analysis of porcine ROPN1 gene.
Lan J, Zhao J, Liu Y
Molecular biology reports39(3)2739-43(2012 Mar)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
ROPN1 gene could be a useful candidate gene in selection for increasing litter size in pigs.
Title: Molecular cloning, sequence characterization, polymorphism and association analysis of porcine ROPN1 gene.
The following ROPN1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ROPN1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OSe29907 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001172369.1 | |
| Accession Version | NM_001172369.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 639bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2015-10-17 | |
| Organism | Sus scrofa(pig) | |
| Product | ropporin-1A | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from GU373671.1. ##Evidence-Data-START## CDS exon combination :: GU373671.1, AK240561.1 [ECO:0000331] RNAseq introns :: mixed/partial sample support SAMN01915393, SAMN01915395 [ECO:0000350] ##Evidence-Data-END## | |
1 | ATGCCTCAGA CCGACAAGCA AATATGCATC CCTCCGGAGC TGCCGGAATT GCTGAAGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001165840.1 |
| CDS | 203..841 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001172369.1 |
1 | ATGCCTCAGA CCGACAAGCA AATATGCATC CCTCCGGAGC TGCCGGAATT GCTGAAGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe234834 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021068368.1 , XM_021068369.1 | |
| Accession Version | XM_021068368.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 639bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | ropporin-1A isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010455.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCCTCAGA CCGACAAGCA AATATGCATC CCTCCGGAGC TGCCGGAATT GCTGAAGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020924027.1 |
| CDS | 227..865 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021068368.1 |
1 | ATGCCTCAGA CCGACAAGCA AATATGCATC CCTCCGGAGC TGCCGGAATT GCTGAAGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe234834 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021068368.1 , XM_021068369.1 | |
| Accession Version | XM_021068369.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 639bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | ropporin-1A isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010455.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCCTCAGA CCGACAAGCA AATATGCATC CCTCCGGAGC TGCCGGAATT GCTGAAGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020924028.1 |
| CDS | 292..930 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021068369.1 |
1 | ATGCCTCAGA CCGACAAGCA AATATGCATC CCTCCGGAGC TGCCGGAATT GCTGAAGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Molecular cloning, sequence characterization, polymorphism and association analysis of porcine ROPN1 gene. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |