LOC103365216 cDNA ORF clone, Stegastes partitus(bicolor damselfish)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC103365216
Entrez Gene ID	103365216
Full Name	tropomyosin alpha-1 chain-like
Gene Type	protein-coding
Organism	Stegastes partitus(bicolor damselfish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_008292595.1	XP_008290817.1	tropomyosin alpha-4 chain-like isoform X1
XM_008292596.1	XP_008290818.1	tropomyosin alpha-1 chain-like isoform X2

Pathways from BioSystems
Gene Ontology

The following LOC103365216 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103365216 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OSt52594	XM_008292595.1 Latest version!	Stegastes partitus tropomyosin alpha-1 chain-like (LOC103365216), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00
OSt52595	XM_008292596.1 Latest version!	Stegastes partitus tropomyosin alpha-1 chain-like (LOC103365216), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC103365216 ( XM_008292595.1 ) cDNA ORF clone, Stegastes partitus(bicolor damselfish) -> XP_008290817.1 Stegastes partitus tropomyosin alpha-1 chain-like (LOC103365216), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OSt52594
Clone ID Related Accession (Same CDS sequence)	XM_008292595.1
Accession Version	XM_008292595.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 690bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2014-06-18
Organism	Stegastes partitus(bicolor damselfish)
Product	tropomyosin alpha-4 chain-like isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007578551.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Stegastes partitus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCAGGTA TGAACTCTCT GGATGCTGTG AAGAGGAAGA TTCAGTGTTT GCAGCAGCAG 
GCCGACGACG CGGAGGATCG GGCTCAGGTC CTACAGAGAG AACTGGACAG TGAACGGGAG 
CTGCGAGAGA AAGCGGAGGG AGATGTAGCA GCTCTGAACC GTAGGATCCA GCTGGTGGAG 
GAGGAGTTGG ACCGAGCCCA GGAGAGACTG GCCACGGCGC TGCAGAAACT GGAGGAGGCG 
GAGAAGGCTG CAGATGAGAG CGAGAGAGGG ATGAAGGTGA TCGAGAACCG AGCGATGAAG 
GACGAGGAGA AGATGGAGAT CCAGGAGATG CAGCTGAAGG AGGCCAAACA CATCGCAGAG 
GAGGCCGACC GCAAATACGA GGAGGTGGCT CGTAAGCTGG TGATCCTGGA GGGGGAGCTG 
GAGAGAGCCG AGGAGAGGGC CGAGCTCTCA GAATGTAAAG CCAGTGACCT GGAGGAGGAG 
CTGAAAAATG TGACCAACAA CCTGAAGTCC TTAGAAGCCC AGTCTGAGAA GGTCAGTGTG 
GGAGTTTCAC ACATTGAAAG GTGGTTCTTC TTGTCTGCAT CCCCATATCC ATACTTCCAG 
TCAGATTTTG CAGCTGGCAG GACGTCAGCC TTCCCGTCTC ACAGTCCTTT GCATCACAGC 
GTTTTGCTCG TTTACAGGCT GCGGCGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008290817.1
CDS	486..1175
Translation	MAGMNSLDAVKRKIQCLQQQADDAEDRAQVLQRELDSERELREKAEGDVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAELSECKASDLEEELKNVTNNLKSLEAQSEKVSVGVSHIERWFFLSASPYPYFQSDFAAGRTSAFPSHSPLHHSVLLVYRLRR

Target ORF information:

RefSeq Version	XM_008292595.1
Organism	Stegastes partitus(bicolor damselfish)
Definition	Stegastes partitus tropomyosin alpha-1 chain-like (LOC103365216), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008292595.1

ORF Insert Sequence:

ATGGCAGGTA TGAACTCTCT GGATGCTGTG AAGAGGAAGA TTCAGTGTTT GCAGCAGCAG 
GCCGACGACG CGGAGGATCG GGCTCAGGTC CTACAGAGAG AACTGGACAG TGAACGGGAG 
CTGCGAGAGA AAGCGGAGGG AGATGTAGCA GCTCTGAACC GTAGGATCCA GCTGGTGGAG 
GAGGAGTTGG ACCGAGCCCA GGAGAGACTG GCCACGGCGC TGCAGAAACT GGAGGAGGCG 
GAGAAGGCTG CAGATGAGAG CGAGAGAGGG ATGAAGGTGA TCGAGAACCG AGCGATGAAG 
GACGAGGAGA AGATGGAGAT CCAGGAGATG CAGCTGAAGG AGGCCAAACA CATCGCAGAG 
GAGGCCGACC GCAAATACGA GGAGGTGGCT CGTAAGCTGG TGATCCTGGA GGGGGAGCTG 
GAGAGAGCCG AGGAGAGGGC CGAGCTCTCA GAATGTAAAG CCAGTGACCT GGAGGAGGAG 
CTGAAAAATG TGACCAACAA CCTGAAGTCC TTAGAAGCCC AGTCTGAGAA GGTCAGTGTG 
GGAGTTTCAC ACATTGAAAG GTGGTTCTTC TTGTCTGCAT CCCCATATCC ATACTTCCAG 
TCAGATTTTG CAGCTGGCAG GACGTCAGCC TTCCCGTCTC ACAGTCCTTT GCATCACAGC 
GTTTTGCTCG TTTACAGGCT GCGGCGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC103365216 ( XM_008292596.1 ) cDNA ORF clone, Stegastes partitus(bicolor damselfish) -> XP_008290818.1 Stegastes partitus tropomyosin alpha-1 chain-like (LOC103365216), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OSt52595
Clone ID Related Accession (Same CDS sequence)	XM_008292596.1
Accession Version	XM_008292596.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 855bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2014-06-18
Organism	Stegastes partitus(bicolor damselfish)
Product	tropomyosin alpha-1 chain-like isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007578551.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Stegastes partitus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGGCCA TCAAGAAGAA GATGCAGATG CTGAAACTGG ACAAGGAGAA CGCCATCGAC 
CGGGCGGAGC AGGCGGAGAC GGACAAGAAG GCGGCCGAGG ACAAATGCAA GCAGCTGGAG 
GAGGAGCTGC TGGACCTGCA GAAGAAGATG AAGCAGACGG AGGACGAACT GGACAAATTC 
TCAGAAGGCC TGAAAGACGC TCAGGAGAAA CTGGAACTGT CTGAGAAGAA AGCAGCAGAC 
GCGGAGGGAG ATGTAGCAGC TCTGAACCGT AGGATCCAGC TGGTGGAGGA GGAGTTGGAC 
CGAGCCCAGG AGAGACTGGC CACGGCGCTG CAGAAACTGG AGGAGGCGGA GAAGGCTGCA 
GATGAGAGCG AGAGAGGGAT GAAGGTGATC GAGAACCGAG CGATGAAGGA CGAGGAGAAG 
ATGGAGATCC AGGAGATGCA GCTGAAGGAG GCCAAACACA TCGCAGAGGA GGCCGACCGC 
AAATACGAGG AGGTGGCTCG TAAGCTGGTG ATCCTGGAGG GGGAGCTGGA GAGAGCCGAG 
GAGAGGGCCG AGCTCTCAGA ATGTAAAGCC AGTGACCTGG AGGAGGAGCT GAAAAATGTG 
ACCAACAACC TGAAGTCCTT AGAAGCCCAG TCTGAGAAGT ACTCAGAAAA AGAAGATAAG 
TACGAGGAGG AGATCAAAGT TCTGACTGAC AAACTGAAGG AGGCTGAAAC CCGTGCAGAG 
TTTGCAGAGA GGACAGTGGC CAAACTGGAA AAGTCCATCG ATGACCTGGA AGAGAAACTA 
TCAAGAGCCA AAGAGGAGAA TCTGGGCATG CACCAAGTCC TGGACCAGAC CCTGCAGGAA 
CTGAACAGCT TATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008290818.1
CDS	44..898
Translation	MEAIKKKMQMLKLDKENAIDRAEQAETDKKAAEDKCKQLEEELLDLQKKMKQTEDELDKFSEGLKDAQEKLELSEKKAADAEGDVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAELSECKASDLEEELKNVTNNLKSLEAQSEKYSEKEDKYEEEIKVLTDKLKEAETRAEFAERTVAKLEKSIDDLEEKLSRAKEENLGMHQVLDQTLQELNSL

Target ORF information:

RefSeq Version	XM_008292596.1
Organism	Stegastes partitus(bicolor damselfish)
Definition	Stegastes partitus tropomyosin alpha-1 chain-like (LOC103365216), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008292596.1

ORF Insert Sequence:

ATGGAGGCCA TCAAGAAGAA GATGCAGATG CTGAAACTGG ACAAGGAGAA CGCCATCGAC 
CGGGCGGAGC AGGCGGAGAC GGACAAGAAG GCGGCCGAGG ACAAATGCAA GCAGCTGGAG 
GAGGAGCTGC TGGACCTGCA GAAGAAGATG AAGCAGACGG AGGACGAACT GGACAAATTC 
TCAGAAGGCC TGAAAGACGC TCAGGAGAAA CTGGAACTGT CTGAGAAGAA AGCAGCAGAC 
GCGGAGGGAG ATGTAGCAGC TCTGAACCGT AGGATCCAGC TGGTGGAGGA GGAGTTGGAC 
CGAGCCCAGG AGAGACTGGC CACGGCGCTG CAGAAACTGG AGGAGGCGGA GAAGGCTGCA 
GATGAGAGCG AGAGAGGGAT GAAGGTGATC GAGAACCGAG CGATGAAGGA CGAGGAGAAG 
ATGGAGATCC AGGAGATGCA GCTGAAGGAG GCCAAACACA TCGCAGAGGA GGCCGACCGC 
AAATACGAGG AGGTGGCTCG TAAGCTGGTG ATCCTGGAGG GGGAGCTGGA GAGAGCCGAG 
GAGAGGGCCG AGCTCTCAGA ATGTAAAGCC AGTGACCTGG AGGAGGAGCT GAAAAATGTG 
ACCAACAACC TGAAGTCCTT AGAAGCCCAG TCTGAGAAGT ACTCAGAAAA AGAAGATAAG 
TACGAGGAGG AGATCAAAGT TCTGACTGAC AAACTGAAGG AGGCTGAAAC CCGTGCAGAG 
TTTGCAGAGA GGACAGTGGC CAAACTGGAA AAGTCCATCG ATGACCTGGA AGAGAAACTA 
TCAAGAGCCA AAGAGGAGAA TCTGGGCATG CACCAAGTCC TGGACCAGAC CCTGCAGGAA 
CTGAACAGCT TATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.