LOC103355816 cDNA ORF clone, Stegastes partitus(bicolor damselfish)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC103355816
Entrez Gene ID	103355816
Full Name	E3 ubiquitin-protein ligase TRIM39-like
Gene Type	protein-coding
Organism	Stegastes partitus(bicolor damselfish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_008279734.1	XP_008277956.1	E3 ubiquitin-protein ligase TRIM39-like

Pathways from BioSystems
Gene Ontology

The following LOC103355816 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103355816 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OSt42161	XM_008279734.1 Latest version!	Stegastes partitus E3 ubiquitin-protein ligase TRIM39-like (LOC103355816), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC103355816 ( XM_008279734.1 ) cDNA ORF clone, Stegastes partitus(bicolor damselfish) -> XP_008277956.1 Stegastes partitus E3 ubiquitin-protein ligase TRIM39-like (LOC103355816), mRNA.

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CloneID	OSt42161
Clone ID Related Accession (Same CDS sequence)	XM_008279734.1
Accession Version	XM_008279734.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1962bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2014-06-18
Organism	Stegastes partitus(bicolor damselfish)
Product	E3 ubiquitin-protein ligase TRIM39-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007577899.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Stegastes partitus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END##

ATGACCCTGC CTCTCCGCCG TGCAGGAATG GCCTCCACTG GGAACCTTTC TGAAGAGCAG 
GTGCACTGCT CCATCTGCCT GGACGTCTTC ACCAACCCCG TGTCCATCCC CTGCGGACAC 
AACTTCTGCC AGAGCTGCAT CCTGGGATAC TGGAAAACCA GCCCTCTGTA TCAGTGTCCC 
ATGTGCAAGA AGTCCTTCTA CAAAAGGCCC GACATCAGCG TCAACACTGT GCTGAGGGAA 
ATCGCGGAGC AGTTCAAGGA GATCAGGGTT AAAAGCGTGG ACGGGAAGGG GAGCAGGGAC 
GAGAGAGAGG GGAGAGACAG CAAGTGGACA ATGGAGAGAA AGAAAAAGGA GGATGAGGAG 
AGGAAGCAGG AGGAGGAGAG GAGGAAGAAA GAGGCGCTGA AGGAGAAACA AGCAGAGAAG 
AGGCCACTTC CAGAGGAGCT ACCACCACTG CTCCCTAGAA CCTCTCCTCC ACCTTCGCCT 
CAGGACACAC CTCTGTTTCT ACCACCGCCA GCTCTTCCAG AAACCTCACC CCCACCCTCG 
CCTCACATCC CAGCGCCTTC TCTTCCTCCC ACTTCACCTC CGCCCGCCTC CCTCCCGTCT 
CCTCCCTGGG GTGAGGTTCT GTGTGATGTT TGTCTGGGCG ACGGCAGGCC GAAAGCAGTC 
AAGTCCTGCC TCGTGTGTCT GACCTCCTAC TGCGAGGAGC ATCTGAAATC CCACTCGGCC 
AGGTTCACCA AGCACAAGCT GATGGAGCCC GTGGCCAACA TGGAGGACAG GATGTGTCCG 
AAGCACGAAC GGCTCCTGGA GCTGTTCTGT AAGAAGGACC AGACTTGCGT GTGCGTCCTG 
TGCACTGAGA CGGACCACCG GGCCCATTAC ACCGTCCCTG TGGAGAGGGA ATGGACCGAC 
AAGAAGGCGC AGCTGAAAAG GACAGGAATA GACGTCCAGC AGATGATCCA GGACAGGGTG 
AAAAAGGTGG AGGAGATCAA GCACTCTGTG GAGCTCAACA AAGCCAGTGC TAAAAGGGAG 
ATCGAGGAGA GCATGCAGGT GTTCTCGGAG CTGGTGCGCT CCATCCAGAG GACTCAGGCC 
GAGCTGGTTC TGGTCATCGA GGAGAAGCAG AGGCAGACGG AGGGCTGGGC TGAAGGCCTC 
ATCGCTGAGC TGGAGCAGGA GATCGCTGAG CTGAAGAGAA GGAACACAGA CCTGGAAAAC 
GTGGCCCGGA CCGACCACAT CCACTTCCTA AAGAGCTTCC CAGCACTCAG CACTCCACCA 
TCTGTTAAAG ACTGGTCTGA GACCAGTGTT CCCACTGATG CCTGCGTGGG CATGATCAGG 
AGATCCGTGT CCAAACTGGA GGCAACGCTA AATGAAATGA TTGACAAACT GTCCGAAAGC 
GAGATCAAAA AAATTCAGAA ATATACAGTG GACGTCACTC TGGACCCAGA CACCGCTAAC 
CCCTGGCTGC AGCTGTCTCA GGACAGGCAT CAGGTGAGAC ACCTGGGCGC CTGGCAGGAC 
CTCCCAGACC ACCCCGATCG ATTCGACACA GTGGTCATAG TGCTGGGCCG CGAGGGCTTC 
ACGTCAGGCA GACACTACTG GGAGGTCCAG GTGGGGGACA AGGACGACTG GTACCTGGGC 
GTGGCCAAGT CTTCTGTCAA CAGAAAGGGC CGGCTCTCCG TGAGCACCAC CCAAGGCTAC 
TGGGCTCTGG CCATGAAGAA AGGCCAGGGG TACCGGGTGT CAACGTCCCC ACCGTTACTG 
CTCGCCCTCG ACCCGAAGCT CAAGAGAGTG GGCGTGTACG TGGACTACGA GGAAGGCCAA 
GTGTCGTTTT ATGATGTGAA AGCTCGGACC CATATTTACA CGTTCGAAGA CACGTTTACA 
GAGAAGATTC TGCCCTTTTT CTACCTGTAC TGCTGCGACA AAGCCTCTGA TACCATCGTC 
ATCTGTCCCG TGAATGAGAA AAGTCTGATC AAACAAAGCT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008277956.1
CDS	96..2057
Translation	MTLPLRRAGMASTGNLSEEQVHCSICLDVFTNPVSIPCGHNFCQSCILGYWKTSPLYQCPMCKKSFYKRPDISVNTVLREIAEQFKEIRVKSVDGKGSRDEREGRDSKWTMERKKKEDEERKQEEERRKKEALKEKQAEKRPLPEELPPLLPRTSPPPSPQDTPLFLPPPALPETSPPPSPHIPAPSLPPTSPPPASLPSPPWGEVLCDVCLGDGRPKAVKSCLVCLTSYCEEHLKSHSARFTKHKLMEPVANMEDRMCPKHERLLELFCKKDQTCVCVLCTETDHRAHYTVPVEREWTDKKAQLKRTGIDVQQMIQDRVKKVEEIKHSVELNKASAKREIEESMQVFSELVRSIQRTQAELVLVIEEKQRQTEGWAEGLIAELEQEIAELKRRNTDLENVARTDHIHFLKSFPALSTPPSVKDWSETSVPTDACVGMIRRSVSKLEATLNEMIDKLSESEIKKIQKYTVDVTLDPDTANPWLQLSQDRHQVRHLGAWQDLPDHPDRFDTVVIVLGREGFTSGRHYWEVQVGDKDDWYLGVAKSSVNRKGRLSVSTTQGYWALAMKKGQGYRVSTSPPLLLALDPKLKRVGVYVDYEEGQVSFYDVKARTHIYTFEDTFTEKILPFFYLYCCDKASDTIVICPVNEKSLIKQS

Target ORF information:

RefSeq Version	XM_008279734.1
Organism	Stegastes partitus(bicolor damselfish)
Definition	Stegastes partitus E3 ubiquitin-protein ligase TRIM39-like (LOC103355816), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008279734.1

ORF Insert Sequence:

ATGACCCTGC CTCTCCGCCG TGCAGGAATG GCCTCCACTG GGAACCTTTC TGAAGAGCAG 
GTGCACTGCT CCATCTGCCT GGACGTCTTC ACCAACCCCG TGTCCATCCC CTGCGGACAC 
AACTTCTGCC AGAGCTGCAT CCTGGGATAC TGGAAAACCA GCCCTCTGTA TCAGTGTCCC 
ATGTGCAAGA AGTCCTTCTA CAAAAGGCCC GACATCAGCG TCAACACTGT GCTGAGGGAA 
ATCGCGGAGC AGTTCAAGGA GATCAGGGTT AAAAGCGTGG ACGGGAAGGG GAGCAGGGAC 
GAGAGAGAGG GGAGAGACAG CAAGTGGACA ATGGAGAGAA AGAAAAAGGA GGATGAGGAG 
AGGAAGCAGG AGGAGGAGAG GAGGAAGAAA GAGGCGCTGA AGGAGAAACA AGCAGAGAAG 
AGGCCACTTC CAGAGGAGCT ACCACCACTG CTCCCTAGAA CCTCTCCTCC ACCTTCGCCT 
CAGGACACAC CTCTGTTTCT ACCACCGCCA GCTCTTCCAG AAACCTCACC CCCACCCTCG 
CCTCACATCC CAGCGCCTTC TCTTCCTCCC ACTTCACCTC CGCCCGCCTC CCTCCCGTCT 
CCTCCCTGGG GTGAGGTTCT GTGTGATGTT TGTCTGGGCG ACGGCAGGCC GAAAGCAGTC 
AAGTCCTGCC TCGTGTGTCT GACCTCCTAC TGCGAGGAGC ATCTGAAATC CCACTCGGCC 
AGGTTCACCA AGCACAAGCT GATGGAGCCC GTGGCCAACA TGGAGGACAG GATGTGTCCG 
AAGCACGAAC GGCTCCTGGA GCTGTTCTGT AAGAAGGACC AGACTTGCGT GTGCGTCCTG 
TGCACTGAGA CGGACCACCG GGCCCATTAC ACCGTCCCTG TGGAGAGGGA ATGGACCGAC 
AAGAAGGCGC AGCTGAAAAG GACAGGAATA GACGTCCAGC AGATGATCCA GGACAGGGTG 
AAAAAGGTGG AGGAGATCAA GCACTCTGTG GAGCTCAACA AAGCCAGTGC TAAAAGGGAG 
ATCGAGGAGA GCATGCAGGT GTTCTCGGAG CTGGTGCGCT CCATCCAGAG GACTCAGGCC 
GAGCTGGTTC TGGTCATCGA GGAGAAGCAG AGGCAGACGG AGGGCTGGGC TGAAGGCCTC 
ATCGCTGAGC TGGAGCAGGA GATCGCTGAG CTGAAGAGAA GGAACACAGA CCTGGAAAAC 
GTGGCCCGGA CCGACCACAT CCACTTCCTA AAGAGCTTCC CAGCACTCAG CACTCCACCA 
TCTGTTAAAG ACTGGTCTGA GACCAGTGTT CCCACTGATG CCTGCGTGGG CATGATCAGG 
AGATCCGTGT CCAAACTGGA GGCAACGCTA AATGAAATGA TTGACAAACT GTCCGAAAGC 
GAGATCAAAA AAATTCAGAA ATATACAGTG GACGTCACTC TGGACCCAGA CACCGCTAAC 
CCCTGGCTGC AGCTGTCTCA GGACAGGCAT CAGGTGAGAC ACCTGGGCGC CTGGCAGGAC 
CTCCCAGACC ACCCCGATCG ATTCGACACA GTGGTCATAG TGCTGGGCCG CGAGGGCTTC 
ACGTCAGGCA GACACTACTG GGAGGTCCAG GTGGGGGACA AGGACGACTG GTACCTGGGC 
GTGGCCAAGT CTTCTGTCAA CAGAAAGGGC CGGCTCTCCG TGAGCACCAC CCAAGGCTAC 
TGGGCTCTGG CCATGAAGAA AGGCCAGGGG TACCGGGTGT CAACGTCCCC ACCGTTACTG 
CTCGCCCTCG ACCCGAAGCT CAAGAGAGTG GGCGTGTACG TGGACTACGA GGAAGGCCAA 
GTGTCGTTTT ATGATGTGAA AGCTCGGACC CATATTTACA CGTTCGAAGA CACGTTTACA 
GAGAAGATTC TGCCCTTTTT CTACCTGTAC TGCTGCGACA AAGCCTCTGA TACCATCGTC 
ATCTGTCCCG TGAATGAGAA AAGTCTGATC AAACAAAGCT AA