Gene Symbol | PRT1 |
Entrez Gene ID | 854543 |
Full Name | translation initiation factor eIF3 core subunit b |
Synonyms | CDC63,DNA26 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
ORF » Species Summary » Saccharomyces cerevisiae S288C » PRT1 cDNA ORF clone
Gene Symbol | PRT1 |
Entrez Gene ID | 854543 |
Full Name | translation initiation factor eIF3 core subunit b |
Synonyms | CDC63,DNA26 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
mRNA | Protein | Name |
---|---|---|
NM_001183781.3 | NP_015006.3 | translation initiation factor eIF3 core subunit b |
Bos taurus (cattle) | EIF3B | NP_001095826.1 |
Mus musculus (house mouse) | Eif3b | NP_598677.1 |
Rattus norvegicus (Norway rat) | Eif3b | NP_001026810.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_01978 | XP_003708716.1 |
Oryza sativa (rice) | Os10g0569200 | NP_001065446.1 |
Gallus gallus (chicken) | EIF3B | XP_003642190.2 |
Arabidopsis thaliana (thale cress) | EIF3B-2 | NP_568477.1 |
Anopheles gambiae (African malaria mosquito) | EIF3B_ANOGA | XP_320387.3 |
Eremothecium gossypii | AGOS_ADR399C | NP_984494.1 |
Arabidopsis thaliana (thale cress) | TIF3B1 | NP_568498.1 |
Pan troglodytes (chimpanzee) | EIF3B | XP_003318263.1 |
Kluyveromyces lactis | KLLA0A03531g | XP_451155.1 |
Neurospora crassa | NCU02208 | XP_959527.1 |
Homo sapiens (human) | EIF3B | NP_001032360.1 |
EIF3B | XP_001086876.1 | |
Canis lupus familiaris (dog) | EIF3B | XP_536894.3 |
Danio rerio (zebrafish) | eif3ba | XP_001335480.2 |
Drosophila melanogaster (fruit fly) | eIF3-S9 | NP_725691.1 |
Saccharomyces cerevisiae (baker's yeast) | PRT1 | NP_015006.3 |
Schizosaccharomyces pombe (fission yeast) | SPAC25G10.08 | NP_594528.1 |
Xenopus tropicalis (tropical clawed frog) | eif3b | NP_001016724.1 |
The nucleotide sequence of Saccharomyces cerevisiae chromosome XV.
Dujon B, Albermann K, Aldea M, Alexandraki D, Ansorge W, Arino J, Benes V, Bohn C, Bolotin-Fukuhara M, Bordonn? R, Boyer J, Camasses A, Casamayor A, Casas C, Ch?ret G, Cziepluch C, Daignan-Fornier B, Dang DV, de Haan M, Delius H, Durand P, Fairhead C, Feldmann H, Gaillon L, Kleine K
Nature387(6632 Suppl)98-102(1997 May)
Life with 6000 genes.
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, Galibert F, Hoheisel JD, Jacq C, Johnston M, Louis EJ, Mewes HW, Murakami Y, Philippsen P, Tettelin H, Oliver SG
Science (New York, N.Y.)274(5287)546, 563-7(1996 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Data suggest that the eIF3b-eIF3j/eIF3a module binds near the mRNA entry channel and regulates the transition between scanning-conducive and initiation-competent conformations of the preinitiation complex.
Title: The C-terminal region of eukaryotic translation initiation factor 3a (eIF3a) promotes mRNA recruitment, scanning, and, together with eIF3j and the eIF3b RNA recognition motif, selection of AUG start codons.
Yeast eIF3b exhibits RNA binding activity but huamn eIF3b doesn't.
Title: Crystal structure of the RNA recognition motif of yeast translation initiation factor eIF3b reveals differences to human eIF3b.
eIF3j/HCR1 closely cooperates with the eIF3b/PRT1 RNA recognition motif and eIF1A on the ribosome to ensure proper formation of the scanning-arrested conformation required for stringent AUG recognition
Title: The indispensable N-terminal half of eIF3j/HCR1 cooperates with its structurally conserved binding partner eIF3b/PRT1-RRM and with eIF1A in stringent AUG selection.
Interaction of the RNP1 motif in PRT1 with HCR1 promotes 40S binding of eIF3.
Title: Interaction of the RNP1 motif in PRT1 with HCR1 promotes 40S binding of eukaryotic initiation factor 3 in yeast.
The following PRT1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PRT1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSi03645 | |
Clone ID Related Accession (Same CDS sequence) | NM_001183781.3 | |
Accession Version | NM_001183781.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2292bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-31 | |
Organism | Saccharomyces cerevisiae S288C | |
Product | translation initiation factor eIF3 core subunit b | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by SGD. This record is derived from an annotated genomic sequence (NC_001147). On Jul 30, 2012 this sequence version replaced NM_001183781.2. ##Genome-Annotation-Data-START## Annotation Provider :: SGD Annotation Status :: Full Annotation Annotation Version :: R64-2-1 URL :: http://www.yeastgenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. |
1 | ATGAAAAATT TTCTTCCACG CACATTGAAA AATATTTACG AATTATATTT CAATAACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_015006.3 |
CDS | 1..2292 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001183781.3 |
1 | ATGAAAAATT TTCTTCCACG CACATTGAAA AATATTTACG AATTATATTT CAATAACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The nucleotide sequence of Saccharomyces cerevisiae chromosome XV. |
Life with 6000 genes. |