Gene Symbol | SUB2 |
Entrez Gene ID | 851475 |
Full Name | ATP-dependent RNA helicase SUB2 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
ORF » Species Summary » Saccharomyces cerevisiae S288C » SUB2 cDNA ORF clone
Gene Symbol | SUB2 |
Entrez Gene ID | 851475 |
Full Name | ATP-dependent RNA helicase SUB2 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
mRNA | Protein | Name |
---|---|---|
NM_001180143.1 | NP_010199.1 | ATP-dependent RNA helicase SUB2 |
Rattus norvegicus (Norway rat) | Ddx39b | NP_579834.2 |
Danio rerio (zebrafish) | bat1 | NP_957237.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP009075 | XP_319825.4 |
Oryza sativa (rice) | Os01g0550000 | NP_001043298.1 |
Homo sapiens (human) | DDX39B | NP_004631.1 |
Canis lupus familiaris (dog) | DDX39B | NP_001014399.1 |
Pan troglodytes (chimpanzee) | DDX39B | NP_001107635.1 |
DDX39B | NP_001040608.1 | |
Kluyveromyces lactis | KLLA0E21935g | XP_454944.1 |
Arabidopsis thaliana (thale cress) | AT5G11170 | NP_568244.2 |
Xenopus tropicalis (tropical clawed frog) | ddx39b | NP_989072.1 |
Bos taurus (cattle) | DDX39B | NP_001028801.1 |
Mus musculus (house mouse) | Ddx39b | NP_001239386.1 |
Drosophila melanogaster (fruit fly) | Hel25E | NP_723089.1 |
Schizosaccharomyces pombe (fission yeast) | uap56 | NP_594261.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_02806 | XP_003720935.1 |
Neurospora crassa | NCU09076 | XP_964893.2 |
Saccharomyces cerevisiae (baker's yeast) | SUB2 | NP_010199.1 |
Eremothecium gossypii | AGOS_ADR260C | NP_984356.1 |
Oryza sativa (rice) | Os01g0549700 | NP_001043297.1 |
The nucleotide sequence of Saccharomyces cerevisiae chromosome IV.
Jacq C, Alt-M?rbe J, Andre B, Arnold W, Bahr A, Ballesta JP, Bargues M, Baron L, Becker A, Biteau N, Bl?cker H, Blugeon C, Boskovic J, Brandt P, Br?ckner M, Buitrago MJ, Coster F, Delaveau T, del Rey F, Dujon B, Eide LG, Garcia-Cantalejo JM, Goffeau A, Gomez-Peris A, Zaccaria P
Nature387(6632 Suppl)75-8(1997 May)
Life with 6000 genes.
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, Galibert F, Hoheisel JD, Jacq C, Johnston M, Louis EJ, Mewes HW, Murakami Y, Philippsen P, Tettelin H, Oliver SG
Science (New York, N.Y.)274(5287)546, 563-7(1996 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
RNA helicase Sub2p mutation is associated with growth, mRNA export, and genomic stability.
Title: Mutational analysis of the yeast RNA helicase Sub2p reveals conserved domains required for growth, mRNA export, and genomic stability.
This work establishes a genome-wide function for THO-Sub2 in transcription elongation and mRNP biogenesis that function to prevent the accumulation of transcription-mediated replication obstacles, including R-loops.
Title: Genome-wide function of THO/TREX in active genes prevents R-loop-dependent replication obstacles.
Data suggests that the THO complex/Sub2p function is required to coordinate events leading to the acquisition of export competence at a step that follows commitment to 3'-processing.
Title: THO/Sub2p functions to coordinate 3'-end processing with gene-nuclear pore association.
A genetic screen reveals extensive interactions between deletions of THO subunits and mRNA 3' end processing mutants.
Title: Nuclear mRNA surveillance in THO/sub2 mutants is triggered by inefficient polyadenylation.
HSP104 molecules undergoing quality control in THO/sub2 mutants fall into two populations: One that is quickly degraded after transcription induction and another that escapes rapid decay and accumulates in foci associated with HSP104 transcription site.
Title: Dissecting mechanisms of nuclear mRNA surveillance in THO/sub2 complex mutants.
The following SUB2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SUB2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSi01021 | |
Clone ID Related Accession (Same CDS sequence) | NM_001180143.1 | |
Accession Version | NM_001180143.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1341bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-31 | |
Organism | Saccharomyces cerevisiae S288C | |
Product | ATP-dependent RNA helicase SUB2 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by SGD. This record is derived from an annotated genomic sequence (NC_001136). ##Genome-Annotation-Data-START## Annotation Provider :: SGD Annotation Status :: Full Annotation Annotation Version :: R64-2-1 URL :: http://www.yeastgenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. |
1 | ATGTCACACG AAGGTGAAGA AGATTTATTG GAGTACTCCG ATAACGAACA AGAAATTCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_010199.1 |
CDS | 1..1341 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001180143.1 |
1 | ATGTCACACG AAGGTGAAGA AGATTTATTG GAGTACTCCG ATAACGAACA AGAAATTCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The nucleotide sequence of Saccharomyces cerevisiae chromosome IV. |
Life with 6000 genes. |