RT1-M1-2 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	RT1-M1-2
Entrez Gene ID	414786
Full Name	RT1 class I, locus M1, gene 2
General protein information	Preferred Names RT1 class I, locus M1, gene 2 Names RT1 class I, locus M1, gene 2 RT1 class I, M1, gene 2
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 20 Map Location: 20p12

mRNA and Protein(s)

mRNA	Protein	Name
NM_001008849.1	NP_001008849.1	RT1 class I, locus M1, gene 2 precursor
XM_006255884.3	XP_006255946.2	RT1 class I, locus M1, gene 2 isoform X1

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	H2-M9	NP_032231.1
Rattus norvegicus (Norway rat)	RT1-M1-2	NP_001008849.1
Mus musculus (house mouse)	H2-M1	NP_808304.2

Gene Ontology

The following RT1-M1-2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the RT1-M1-2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa09717	NM_001008849.1 Latest version!	Rattus norvegicus RT1 class I, locus M1, gene 2 (RT1-M1-2), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$223.30 $319.00
ORa60154	XM_006255884.3 Latest version!	Rattus norvegicus RT1 class I, locus M1, gene 2 (RT1-M1-2), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

RT1-M1-2 ( NM_001008849.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001008849.1 Rattus norvegicus RT1 class I, locus M1, gene 2 (RT1-M1-2), mRNA.

Price & Availability↑

CloneID	ORa09717
Clone ID Related Accession (Same CDS sequence)	NM_001008849.1
Accession Version	NM_001008849.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1026bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-31
Organism	Rattus norvegicus(Norway rat)
Product	RT1 class I, locus M1, gene 2 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX883051.1. On Apr 19, 2005 this sequence version replaced XM_579243.1. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052297, SAMEA2689595 [ECO:0000350] ##Evidence-Data-END##

ATGAAGGTCC TTTTAGTTCT GGCTGTCCTG CTGCTTATGG TCACCCTTGT CATCACCAAG 
AATCCAAAAG GTTCACACTC TCTGAGATAT TTACAAACAC TCCTGTCATG GCCTGGCCTT 
GCGGAGCCCC AGTTCATCTT TGTTGGCTAT GTGGGCAATA CACAGTTCAT AGGATTCAAC 
AGCAGATCAC AGAGTCAGTG GTCGTTGCAC AGAGCACCGT GGAAAGATCA ACAGACTCCA 
GAGTATTGGG AGAAGACAAT ACAGGAAGTC CTGAGTGAAA AACGGAACTT GAAAGAAGTA 
ATGGAGAAAA TGCTTCACAT CTACCCTAAC AGCACGACTG GTAATCACAC AATCCAGATG 
AGGTATGGCT GTGACGTGCT GCCTGGAGGT TACTTCAGTC ATGGAATCCT AGAATTGAAT 
TTTGATAGCC AGGATTACAT CATACTGAAT GATGAACTGC ACAACTGGAT AATAGATGGC 
AAGGCAGCTG AGATGCTCAA GCAGGAGTGG GAGGACACGC ATTATGCACA AATTGTGAAG 
AATTACCTGA AGGGATCATG TGTGGATGAA CTCCTTACAG AGCTGGACCT TGGGAAAGAT 
TATTTGCTGA GAACAGACAC CCCCAGAACA CACGTGATCC ACAAAGTCAG ACCTGACAGA 
AAAATCATCC TGAGGTGCTG GGCCCTGAAC TTCTACCCTG CTGAAATCAC TATAACCTGG 
CAGAGAGATG GGAGGAACCA GACTCAGGAT GTGGAAGTGA TAGAGACGAG GCCTGCAGGG 
GATGGAACCT TCCAGAAGTG GGCAGCTGTG GTGGTGCCTT CTGGGGAAGA GCAGAAATAC 
ACATGCCGTG TGGAGCATGA GGGGCTGCCA GAGCCCATCA CCCTGAGATG GGAGTCTCCT 
CAGTCCACCA TCCCCGTCAT GGCTATTGTT CTTTGTCTGG TTCTTGGAGC TCTGCTTACA 
GGAGCAGTGG TGACTTCTCT GATATGGAAG AGGAAGATTA AAGGTAAAGA CAGGGCAGGG 
TCTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001008849.1
CDS	1..1026
Translation	MKVLLVLAVLLLMVTLVITKNPKGSHSLRYLQTLLSWPGLAEPQFIFVGYVGNTQFIGFNSRSQSQWSLHRAPWKDQQTPEYWEKTIQEVLSEKRNLKEVMEKMLHIYPNSTTGNHTIQMRYGCDVLPGGYFSHGILELNFDSQDYIILNDELHNWIIDGKAAEMLKQEWEDTHYAQIVKNYLKGSCVDELLTELDLGKDYLLRTDTPRTHVIHKVRPDRKIILRCWALNFYPAEITITWQRDGRNQTQDVEVIETRPAGDGTFQKWAAVVVPSGEEQKYTCRVEHEGLPEPITLRWESPQSTIPVMAIVLCLVLGALLTGAVVTSLIWKRKIKGKDRAGS

Target ORF information:

RefSeq Version	NM_001008849.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus RT1 class I, locus M1, gene 2 (RT1-M1-2), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001008849.1

ORF Insert Sequence:

ATGAAGGTCC TTTTAGTTCT GGCTGTCCTG CTGCTTATGG TCACCCTTGT CATCACCAAG 
AATCCAAAAG GTTCACACTC TCTGAGATAT TTACAAACAC TCCTGTCATG GCCTGGCCTT 
GCGGAGCCCC AGTTCATCTT TGTTGGCTAT GTGGGCAATA CACAGTTCAT AGGATTCAAC 
AGCAGATCAC AGAGTCAGTG GTCGTTGCAC AGAGCACCGT GGAAAGATCA ACAGACTCCA 
GAGTATTGGG AGAAGACAAT ACAGGAAGTC CTGAGTGAAA AACGGAACTT GAAAGAAGTA 
ATGGAGAAAA TGCTTCACAT CTACCCTAAC AGCACGACTG GTAATCACAC AATCCAGATG 
AGGTATGGCT GTGACGTGCT GCCTGGAGGT TACTTCAGTC ATGGAATCCT AGAATTGAAT 
TTTGATAGCC AGGATTACAT CATACTGAAT GATGAACTGC ACAACTGGAT AATAGATGGC 
AAGGCAGCTG AGATGCTCAA GCAGGAGTGG GAGGACACGC ATTATGCACA AATTGTGAAG 
AATTACCTGA AGGGATCATG TGTGGATGAA CTCCTTACAG AGCTGGACCT TGGGAAAGAT 
TATTTGCTGA GAACAGACAC CCCCAGAACA CACGTGATCC ACAAAGTCAG ACCTGACAGA 
AAAATCATCC TGAGGTGCTG GGCCCTGAAC TTCTACCCTG CTGAAATCAC TATAACCTGG 
CAGAGAGATG GGAGGAACCA GACTCAGGAT GTGGAAGTGA TAGAGACGAG GCCTGCAGGG 
GATGGAACCT TCCAGAAGTG GGCAGCTGTG GTGGTGCCTT CTGGGGAAGA GCAGAAATAC 
ACATGCCGTG TGGAGCATGA GGGGCTGCCA GAGCCCATCA CCCTGAGATG GGAGTCTCCT 
CAGTCCACCA TCCCCGTCAT GGCTATTGTT CTTTGTCTGG TTCTTGGAGC TCTGCTTACA 
GGAGCAGTGG TGACTTCTCT GATATGGAAG AGGAAGATTA AAGGTAAAGA CAGGGCAGGG 
TCTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RT1-M1-2 ( XM_006255884.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006255946.2 Rattus norvegicus RT1 class I, locus M1, gene 2 (RT1-M1-2), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa60154
Clone ID Related Accession (Same CDS sequence)	XM_006255884.3
Accession Version	XM_006255884.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1008bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	RT1 class I, locus M1, gene 2 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005119.4) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006255884.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAGGTCC TTTTAGTTCT GGCTGTCCTG CTGCTTATGG TCACCCTTGT CATCACCAAG 
AATCCAAAAG GTTCACACTC TCTGAGATAT TTACAAACAC TCCTGTCATG GCCTGGCCTT 
GCGGAGCCCC AGTTCATCTT TGTTGGCTAT GTGGGCAATA CACAGTTCAT AGGATTCAAC 
AGCAGATCAC AGAGTCAGTG GTCGTTGCAC AGAGCACCGT GGAAAGATCA ACAGACTCCA 
GAGTATTGGG AGAAGACAAT ACAGGAAGTC CTGAGTGAAA AACGGAACTT GAAAGAAGTA 
ATGGAGAAAA TGCTTCACAT CTACCCTAAC AGCACGACTG GTAATCACAC AATCCAGATG 
AGGTATGGCT GTGACGTGCT GCCTGGAGGT TACTTCAGTC ATGGAATCCT AGAATTGAAT 
TTTGATAGCC AGGATTACAT CATACTGAAT GATGAACTGC ACAACTGGAT AATAGATGGC 
AAGGCAGCTG AGATGCTCAA GCAGGAGTGG GAGGACACGC ATTATGCACA AATTGTGAAG 
AATTACCTGA AGGGATCATG TGTGGATGAA CTCCTTACAG AGCTGGACCT TGGGAAAGAT 
TATTTGCTGA GAACAGACAC CCCCAGAACA CACGTGATCC ACAAAGTCAG ACCTGACAGA 
AAAATCATCC TGAGGTGCTG GGCCCTGAAC TTCTACCCTG CTGAAATCAC TATAACCTGG 
CAGAGAGATG GGAGGAACCA GACTCAGGAT GTGGAAGTGA TAGAGACGAG GCCTGCAGGG 
GATGGAACCT TCCAGAAGTG GGCAGCTGTG GTGGTGCCTT CTGGGGAAGA GCAGAAATAC 
ACATGCCGTG TGGAGCATGA GGGGCTGCCA GAGCCCATCA CCCTGAGATG GGAGTCTCCT 
CAGTCCACCA TCCCCGTCAT GGCTATTGTT CTTTGTCTGG TTCTTGGAGC TCTGCTTACA 
GGAGCAGTGG TGACTTCTCT GATATGGAAG AGGAAGATTA AAGGATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006255946.2
CDS	1127..2134
Translation	MKVLLVLAVLLLMVTLVITKNPKGSHSLRYLQTLLSWPGLAEPQFIFVGYVGNTQFIGFNSRSQSQWSLHRAPWKDQQTPEYWEKTIQEVLSEKRNLKEVMEKMLHIYPNSTTGNHTIQMRYGCDVLPGGYFSHGILELNFDSQDYIILNDELHNWIIDGKAAEMLKQEWEDTHYAQIVKNYLKGSCVDELLTELDLGKDYLLRTDTPRTHVIHKVRPDRKIILRCWALNFYPAEITITWQRDGRNQTQDVEVIETRPAGDGTFQKWAAVVVPSGEEQKYTCRVEHEGLPEPITLRWESPQSTIPVMAIVLCLVLGALLTGAVVTSLIWKRKIKG

Target ORF information:

RefSeq Version	XM_006255884.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus RT1 class I, locus M1, gene 2 (RT1-M1-2), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006255884.3

ORF Insert Sequence:

ATGAAGGTCC TTTTAGTTCT GGCTGTCCTG CTGCTTATGG TCACCCTTGT CATCACCAAG 
AATCCAAAAG GTTCACACTC TCTGAGATAT TTACAAACAC TCCTGTCATG GCCTGGCCTT 
GCGGAGCCCC AGTTCATCTT TGTTGGCTAT GTGGGCAATA CACAGTTCAT AGGATTCAAC 
AGCAGATCAC AGAGTCAGTG GTCGTTGCAC AGAGCACCGT GGAAAGATCA ACAGACTCCA 
GAGTATTGGG AGAAGACAAT ACAGGAAGTC CTGAGTGAAA AACGGAACTT GAAAGAAGTA 
ATGGAGAAAA TGCTTCACAT CTACCCTAAC AGCACGACTG GTAATCACAC AATCCAGATG 
AGGTATGGCT GTGACGTGCT GCCTGGAGGT TACTTCAGTC ATGGAATCCT AGAATTGAAT 
TTTGATAGCC AGGATTACAT CATACTGAAT GATGAACTGC ACAACTGGAT AATAGATGGC 
AAGGCAGCTG AGATGCTCAA GCAGGAGTGG GAGGACACGC ATTATGCACA AATTGTGAAG 
AATTACCTGA AGGGATCATG TGTGGATGAA CTCCTTACAG AGCTGGACCT TGGGAAAGAT 
TATTTGCTGA GAACAGACAC CCCCAGAACA CACGTGATCC ACAAAGTCAG ACCTGACAGA 
AAAATCATCC TGAGGTGCTG GGCCCTGAAC TTCTACCCTG CTGAAATCAC TATAACCTGG 
CAGAGAGATG GGAGGAACCA GACTCAGGAT GTGGAAGTGA TAGAGACGAG GCCTGCAGGG 
GATGGAACCT TCCAGAAGTG GGCAGCTGTG GTGGTGCCTT CTGGGGAAGA GCAGAAATAC 
ACATGCCGTG TGGAGCATGA GGGGCTGCCA GAGCCCATCA CCCTGAGATG GGAGTCTCCT 
CAGTCCACCA TCCCCGTCAT GGCTATTGTT CTTTGTCTGG TTCTTGGAGC TCTGCTTACA 
GGAGCAGTGG TGACTTCTCT GATATGGAAG AGGAAGATTA AAGGATAA