Hoxd4 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Hoxd4
Entrez Gene ID	288153
Full Name	homeo box D4
General protein information	Preferred Names homeo box D4 Names homeobox protein Hox-D4
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 3 Map Location: 3q23

mRNA and Protein(s)

mRNA	Protein	Name
NM_001105885.1	NP_001099355.1	homeobox protein Hox-D4
XM_008761886.2	XP_008760108.1	homeobox protein Hox-D4 isoform X1
XM_008761883.2	XP_008760105.1	homeobox protein Hox-D4 isoform X1
XM_008761885.2	XP_008760107.1	homeobox protein Hox-D4 isoform X1
XM_008761884.2	XP_008760106.1	homeobox protein Hox-D4 isoform X1
XM_008761887.2	XP_008760109.1	homeobox protein Hox-D4 isoform X1

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	HOXD4	XP_003640225.1
Bos taurus (cattle)	HOXD4	NP_001094557.1
Danio rerio (zebrafish)	hoxd4a	NP_001119917.1
Xenopus tropicalis (tropical clawed frog)	hoxd4	XP_002935718.1
Mus musculus (house mouse)	Hoxd4	NP_034599.2
Homo sapiens (human)	HOXD4	NP_055436.2
Pan troglodytes (chimpanzee)	HOXD4	NP_001075038.1
Rattus norvegicus (Norway rat)	Hoxd4	NP_001099355.1
Gallus gallus (chicken)	HOXD4	NP_001012293.1

Gene Ontology
Bibliography

Related articles in PubMed

Uncovering early response of gene regulatory networks in ESCs by systematic induction of transcription factors.
Nishiyama A, Xin L, Sharov AA, Thomas M, Mowrer G, Meyers E, Piao Y, Mehta S, Yee S, Nakatake Y, Stagg C, Sharova L, Correa-Cerro LS, Bassey U, Hoang H, Kim E, Tapnio R, Qian Y, Dudekula D, Zalzman M, Li M, Falco G, Yang HT, Lee SL, Monti M, Stanghellini I, Islam MN, Nagaraja R, Goldberg I, Wang W, Longo DL, Schlessinger D, Ko MS
Cell stem cell5(4)420-33(2009 Oct)

Compound mutants for the paralogous hoxa-4, hoxb-4, and hoxd-4 genes show more complete homeotic transformations and a dose-dependent increase in the number of vertebrae transformed.
Horan GS, Ram?rez-Solis R, Featherstone MS, Wolgemuth DJ, Bradley A, Behringer RR
Genes & development9(13)1667-77(1995 Jul)

Mutations in paralogous Hox genes result in overlapping homeotic transformations of the axial skeleton: evidence for unique and redundant function.
Horan GS, Kov?cs EN, Behringer RR, Featherstone MS
Developmental biology169(1)359-72(1995 May)

HOX4 genes encode transcription factors with potential auto- and cross-regulatory capacities.
Zappavigna V, Renucci A, Izpis?a-Belmonte JC, Urier G, Peschle C, Duboule D
The EMBO journal10(13)4177-87(1991 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Hoxd4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Hoxd4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ORa25980	NM_001105885.1 Latest version!	Rattus norvegicus homeo box D4 (Hoxd4), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$139.30 $199.00
ORa25980	XM_008761886.2 Latest version!	Rattus norvegicus homeo box D4 (Hoxd4), transcript variant X4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$139.30 $199.00
ORa25980	XM_008761887.2 Latest version!	Rattus norvegicus homeo box D4 (Hoxd4), transcript variant X5, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$139.30 $199.00
ORa25980	XM_008761883.2 Latest version!	Rattus norvegicus homeo box D4 (Hoxd4), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$139.30 $199.00
ORa25980	XM_008761884.2 Latest version!	Rattus norvegicus homeo box D4 (Hoxd4), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$139.30 $199.00
ORa25980	XM_008761885.2 Latest version!	Rattus norvegicus homeo box D4 (Hoxd4), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$139.30 $199.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Hoxd4 ( NM_001105885.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001099355.1 Rattus norvegicus homeo box D4 (Hoxd4), mRNA.

Price & Availability↑

CloneID	ORa25980
Clone ID Related Accession (Same CDS sequence)	NM_001105885.1 , XM_008761886.2 , XM_008761883.2 , XM_008761885.2 , XM_008761884.2 , XM_008761887.2
Accession Version	NM_001105885.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 756bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-27
Organism	Rattus norvegicus(Norway rat)
Product	homeobox protein Hox-D4
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473949.1. On or before Oct 3, 2007 this sequence version replaced XM_221521.4, XM_001064107.1.

ATGGCCATGA GTTCGTATAT GGTGAACTCT AAGTACGTGG ACCCCAAGTT TCCTCCGTGC 
GAGGAATATT TGCAGGGTGG CTACCTAGGC GAGCAGGGAG CCGACTACTA CGGCAGCGGT 
GCACAGGGCT CCGACTTCCA GCCCCCGGGG CTCTACCCAC GGCCCGACTT CGGTGAGCAA 
CCCTTCGGAG GCGGCGGGCC CGGGCCTGGC TCAGCGCTGC CCGCGCGGGG TCACGGACAG 
GAGCCGAGCG GCCCGGGAAG TCACTACAGT GCCCCGGGAG AGCCGTGCCC AGCGCCCCCG 
CCTGCGCCCC TGCCTGGCGC TCGGGCCTGC AGCCAGCCCA CCGGCCCCAA GCAGCCGCCC 
CCCGGGACAG CACTCAAGCA GCCCGCTGTG GTCTACCCTT GGATGAAGAA GGTGCATGTG 
AATTCGGTGA ACCCCAACTA CACCGGCGGG GAGCCCAAGC GTTCCCGGAC GGCCTACACC 
AGACAGCAAG TCCTAGAACT GGAAAAGGAA TTTCATTTTA ACAGGTATCT GACCAGGCGC 
CGTCGGATTG AAATCGCTCA CACCCTGTGT CTTTCTGAGC GCCAGATCAA GATCTGGTTC 
CAGAACCGGA GGATGAAGTG GAAAAAAGAT CACAAACTGC CCAACACCAA GGGCAGATCT 
TCTTCTTCCT CATCTTCCTG CTCCTCTTCA GCTGCCCCCA GCCAGCATTT GCAGCCAATG 
GCCAAGGACC ACCATACGGA CCTGACGACC TTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001099355.1
CDS	1411..2166
Translation	MAMSSYMVNSKYVDPKFPPCEEYLQGGYLGEQGADYYGSGAQGSDFQPPGLYPRPDFGEQPFGGGGPGPGSALPARGHGQEPSGPGSHYSAPGEPCPAPPPAPLPGARACSQPTGPKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSCSSSAAPSQHLQPMAKDHHTDLTTL

Target ORF information:

RefSeq Version	NM_001105885.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus homeo box D4 (Hoxd4), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001105885.1

ORF Insert Sequence:

ATGGCCATGA GTTCGTATAT GGTGAACTCT AAGTACGTGG ACCCCAAGTT TCCTCCGTGC 
GAGGAATATT TGCAGGGTGG CTACCTAGGC GAGCAGGGAG CCGACTACTA CGGCAGCGGT 
GCACAGGGCT CCGACTTCCA GCCCCCGGGG CTCTACCCAC GGCCCGACTT CGGTGAGCAA 
CCCTTCGGAG GCGGCGGGCC CGGGCCTGGC TCAGCGCTGC CCGCGCGGGG TCACGGACAG 
GAGCCGAGCG GCCCGGGAAG TCACTACAGT GCCCCGGGAG AGCCGTGCCC AGCGCCCCCG 
CCTGCGCCCC TGCCTGGCGC TCGGGCCTGC AGCCAGCCCA CCGGCCCCAA GCAGCCGCCC 
CCCGGGACAG CACTCAAGCA GCCCGCTGTG GTCTACCCTT GGATGAAGAA GGTGCATGTG 
AATTCGGTGA ACCCCAACTA CACCGGCGGG GAGCCCAAGC GTTCCCGGAC GGCCTACACC 
AGACAGCAAG TCCTAGAACT GGAAAAGGAA TTTCATTTTA ACAGGTATCT GACCAGGCGC 
CGTCGGATTG AAATCGCTCA CACCCTGTGT CTTTCTGAGC GCCAGATCAA GATCTGGTTC 
CAGAACCGGA GGATGAAGTG GAAAAAAGAT CACAAACTGC CCAACACCAA GGGCAGATCT 
TCTTCTTCCT CATCTTCCTG CTCCTCTTCA GCTGCCCCCA GCCAGCATTT GCAGCCAATG 
GCCAAGGACC ACCATACGGA CCTGACGACC TTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Hoxd4 ( XM_008761886.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008760108.1 Rattus norvegicus homeo box D4 (Hoxd4), transcript variant X4, mRNA.

Price & Availability↑

CloneID	ORa25980
Clone ID Related Accession (Same CDS sequence)	NM_001105885.1 , XM_008761886.2 , XM_008761883.2 , XM_008761885.2 , XM_008761884.2 , XM_008761887.2
Accession Version	XM_008761886.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 756bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	homeobox protein Hox-D4 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008761886.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCCATGA GTTCGTATAT GGTGAACTCT AAGTACGTGG ACCCCAAGTT TCCTCCGTGC 
GAGGAATATT TGCAGGGTGG CTACCTAGGC GAGCAGGGAG CCGACTACTA CGGCAGCGGT 
GCACAGGGCT CCGACTTCCA GCCCCCGGGG CTCTACCCAC GGCCCGACTT CGGTGAGCAA 
CCCTTCGGAG GCGGCGGGCC CGGGCCTGGC TCAGCGCTGC CCGCGCGGGG TCACGGACAG 
GAGCCGAGCG GCCCGGGAAG TCACTACAGT GCCCCGGGAG AGCCGTGCCC AGCGCCCCCG 
CCTGCGCCCC TGCCTGGCGC TCGGGCCTGC AGCCAGCCCA CCGGCCCCAA GCAGCCGCCC 
CCCGGGACAG CACTCAAGCA GCCCGCTGTG GTCTACCCTT GGATGAAGAA GGTGCATGTG 
AATTCGGTGA ACCCCAACTA CACCGGCGGG GAGCCCAAGC GTTCCCGGAC GGCCTACACC 
AGACAGCAAG TCCTAGAACT GGAAAAGGAA TTTCATTTTA ACAGGTATCT GACCAGGCGC 
CGTCGGATTG AAATCGCTCA CACCCTGTGT CTTTCTGAGC GCCAGATCAA GATCTGGTTC 
CAGAACCGGA GGATGAAGTG GAAAAAAGAT CACAAACTGC CCAACACCAA GGGCAGATCT 
TCTTCTTCCT CATCTTCCTG CTCCTCTTCA GCTGCCCCCA GCCAGCATTT GCAGCCAATG 
GCCAAGGACC ACCATACGGA CCTGACGACC TTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008760108.1
CDS	5305..6060
Translation	MAMSSYMVNSKYVDPKFPPCEEYLQGGYLGEQGADYYGSGAQGSDFQPPGLYPRPDFGEQPFGGGGPGPGSALPARGHGQEPSGPGSHYSAPGEPCPAPPPAPLPGARACSQPTGPKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSCSSSAAPSQHLQPMAKDHHTDLTTL

Target ORF information:

RefSeq Version	XM_008761886.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus homeo box D4 (Hoxd4), transcript variant X4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008761886.2

ORF Insert Sequence:

ATGGCCATGA GTTCGTATAT GGTGAACTCT AAGTACGTGG ACCCCAAGTT TCCTCCGTGC 
GAGGAATATT TGCAGGGTGG CTACCTAGGC GAGCAGGGAG CCGACTACTA CGGCAGCGGT 
GCACAGGGCT CCGACTTCCA GCCCCCGGGG CTCTACCCAC GGCCCGACTT CGGTGAGCAA 
CCCTTCGGAG GCGGCGGGCC CGGGCCTGGC TCAGCGCTGC CCGCGCGGGG TCACGGACAG 
GAGCCGAGCG GCCCGGGAAG TCACTACAGT GCCCCGGGAG AGCCGTGCCC AGCGCCCCCG 
CCTGCGCCCC TGCCTGGCGC TCGGGCCTGC AGCCAGCCCA CCGGCCCCAA GCAGCCGCCC 
CCCGGGACAG CACTCAAGCA GCCCGCTGTG GTCTACCCTT GGATGAAGAA GGTGCATGTG 
AATTCGGTGA ACCCCAACTA CACCGGCGGG GAGCCCAAGC GTTCCCGGAC GGCCTACACC 
AGACAGCAAG TCCTAGAACT GGAAAAGGAA TTTCATTTTA ACAGGTATCT GACCAGGCGC 
CGTCGGATTG AAATCGCTCA CACCCTGTGT CTTTCTGAGC GCCAGATCAA GATCTGGTTC 
CAGAACCGGA GGATGAAGTG GAAAAAAGAT CACAAACTGC CCAACACCAA GGGCAGATCT 
TCTTCTTCCT CATCTTCCTG CTCCTCTTCA GCTGCCCCCA GCCAGCATTT GCAGCCAATG 
GCCAAGGACC ACCATACGGA CCTGACGACC TTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Hoxd4 ( XM_008761883.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008760105.1 Rattus norvegicus homeo box D4 (Hoxd4), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa25980
Clone ID Related Accession (Same CDS sequence)	NM_001105885.1 , XM_008761886.2 , XM_008761883.2 , XM_008761885.2 , XM_008761884.2 , XM_008761887.2
Accession Version	XM_008761883.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 756bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	homeobox protein Hox-D4 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008761883.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCCATGA GTTCGTATAT GGTGAACTCT AAGTACGTGG ACCCCAAGTT TCCTCCGTGC 
GAGGAATATT TGCAGGGTGG CTACCTAGGC GAGCAGGGAG CCGACTACTA CGGCAGCGGT 
GCACAGGGCT CCGACTTCCA GCCCCCGGGG CTCTACCCAC GGCCCGACTT CGGTGAGCAA 
CCCTTCGGAG GCGGCGGGCC CGGGCCTGGC TCAGCGCTGC CCGCGCGGGG TCACGGACAG 
GAGCCGAGCG GCCCGGGAAG TCACTACAGT GCCCCGGGAG AGCCGTGCCC AGCGCCCCCG 
CCTGCGCCCC TGCCTGGCGC TCGGGCCTGC AGCCAGCCCA CCGGCCCCAA GCAGCCGCCC 
CCCGGGACAG CACTCAAGCA GCCCGCTGTG GTCTACCCTT GGATGAAGAA GGTGCATGTG 
AATTCGGTGA ACCCCAACTA CACCGGCGGG GAGCCCAAGC GTTCCCGGAC GGCCTACACC 
AGACAGCAAG TCCTAGAACT GGAAAAGGAA TTTCATTTTA ACAGGTATCT GACCAGGCGC 
CGTCGGATTG AAATCGCTCA CACCCTGTGT CTTTCTGAGC GCCAGATCAA GATCTGGTTC 
CAGAACCGGA GGATGAAGTG GAAAAAAGAT CACAAACTGC CCAACACCAA GGGCAGATCT 
TCTTCTTCCT CATCTTCCTG CTCCTCTTCA GCTGCCCCCA GCCAGCATTT GCAGCCAATG 
GCCAAGGACC ACCATACGGA CCTGACGACC TTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008760105.1
CDS	4926..5681
Translation	MAMSSYMVNSKYVDPKFPPCEEYLQGGYLGEQGADYYGSGAQGSDFQPPGLYPRPDFGEQPFGGGGPGPGSALPARGHGQEPSGPGSHYSAPGEPCPAPPPAPLPGARACSQPTGPKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSCSSSAAPSQHLQPMAKDHHTDLTTL

Target ORF information:

RefSeq Version	XM_008761883.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus homeo box D4 (Hoxd4), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008761883.2

ORF Insert Sequence:

ATGGCCATGA GTTCGTATAT GGTGAACTCT AAGTACGTGG ACCCCAAGTT TCCTCCGTGC 
GAGGAATATT TGCAGGGTGG CTACCTAGGC GAGCAGGGAG CCGACTACTA CGGCAGCGGT 
GCACAGGGCT CCGACTTCCA GCCCCCGGGG CTCTACCCAC GGCCCGACTT CGGTGAGCAA 
CCCTTCGGAG GCGGCGGGCC CGGGCCTGGC TCAGCGCTGC CCGCGCGGGG TCACGGACAG 
GAGCCGAGCG GCCCGGGAAG TCACTACAGT GCCCCGGGAG AGCCGTGCCC AGCGCCCCCG 
CCTGCGCCCC TGCCTGGCGC TCGGGCCTGC AGCCAGCCCA CCGGCCCCAA GCAGCCGCCC 
CCCGGGACAG CACTCAAGCA GCCCGCTGTG GTCTACCCTT GGATGAAGAA GGTGCATGTG 
AATTCGGTGA ACCCCAACTA CACCGGCGGG GAGCCCAAGC GTTCCCGGAC GGCCTACACC 
AGACAGCAAG TCCTAGAACT GGAAAAGGAA TTTCATTTTA ACAGGTATCT GACCAGGCGC 
CGTCGGATTG AAATCGCTCA CACCCTGTGT CTTTCTGAGC GCCAGATCAA GATCTGGTTC 
CAGAACCGGA GGATGAAGTG GAAAAAAGAT CACAAACTGC CCAACACCAA GGGCAGATCT 
TCTTCTTCCT CATCTTCCTG CTCCTCTTCA GCTGCCCCCA GCCAGCATTT GCAGCCAATG 
GCCAAGGACC ACCATACGGA CCTGACGACC TTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Hoxd4 ( XM_008761885.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008760107.1 Rattus norvegicus homeo box D4 (Hoxd4), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ORa25980
Clone ID Related Accession (Same CDS sequence)	NM_001105885.1 , XM_008761886.2 , XM_008761883.2 , XM_008761885.2 , XM_008761884.2 , XM_008761887.2
Accession Version	XM_008761885.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 756bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	homeobox protein Hox-D4 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008761885.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCCATGA GTTCGTATAT GGTGAACTCT AAGTACGTGG ACCCCAAGTT TCCTCCGTGC 
GAGGAATATT TGCAGGGTGG CTACCTAGGC GAGCAGGGAG CCGACTACTA CGGCAGCGGT 
GCACAGGGCT CCGACTTCCA GCCCCCGGGG CTCTACCCAC GGCCCGACTT CGGTGAGCAA 
CCCTTCGGAG GCGGCGGGCC CGGGCCTGGC TCAGCGCTGC CCGCGCGGGG TCACGGACAG 
GAGCCGAGCG GCCCGGGAAG TCACTACAGT GCCCCGGGAG AGCCGTGCCC AGCGCCCCCG 
CCTGCGCCCC TGCCTGGCGC TCGGGCCTGC AGCCAGCCCA CCGGCCCCAA GCAGCCGCCC 
CCCGGGACAG CACTCAAGCA GCCCGCTGTG GTCTACCCTT GGATGAAGAA GGTGCATGTG 
AATTCGGTGA ACCCCAACTA CACCGGCGGG GAGCCCAAGC GTTCCCGGAC GGCCTACACC 
AGACAGCAAG TCCTAGAACT GGAAAAGGAA TTTCATTTTA ACAGGTATCT GACCAGGCGC 
CGTCGGATTG AAATCGCTCA CACCCTGTGT CTTTCTGAGC GCCAGATCAA GATCTGGTTC 
CAGAACCGGA GGATGAAGTG GAAAAAAGAT CACAAACTGC CCAACACCAA GGGCAGATCT 
TCTTCTTCCT CATCTTCCTG CTCCTCTTCA GCTGCCCCCA GCCAGCATTT GCAGCCAATG 
GCCAAGGACC ACCATACGGA CCTGACGACC TTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008760107.1
CDS	7292..8047
Translation	MAMSSYMVNSKYVDPKFPPCEEYLQGGYLGEQGADYYGSGAQGSDFQPPGLYPRPDFGEQPFGGGGPGPGSALPARGHGQEPSGPGSHYSAPGEPCPAPPPAPLPGARACSQPTGPKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSCSSSAAPSQHLQPMAKDHHTDLTTL

Target ORF information:

RefSeq Version	XM_008761885.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus homeo box D4 (Hoxd4), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008761885.2

ORF Insert Sequence:

ATGGCCATGA GTTCGTATAT GGTGAACTCT AAGTACGTGG ACCCCAAGTT TCCTCCGTGC 
GAGGAATATT TGCAGGGTGG CTACCTAGGC GAGCAGGGAG CCGACTACTA CGGCAGCGGT 
GCACAGGGCT CCGACTTCCA GCCCCCGGGG CTCTACCCAC GGCCCGACTT CGGTGAGCAA 
CCCTTCGGAG GCGGCGGGCC CGGGCCTGGC TCAGCGCTGC CCGCGCGGGG TCACGGACAG 
GAGCCGAGCG GCCCGGGAAG TCACTACAGT GCCCCGGGAG AGCCGTGCCC AGCGCCCCCG 
CCTGCGCCCC TGCCTGGCGC TCGGGCCTGC AGCCAGCCCA CCGGCCCCAA GCAGCCGCCC 
CCCGGGACAG CACTCAAGCA GCCCGCTGTG GTCTACCCTT GGATGAAGAA GGTGCATGTG 
AATTCGGTGA ACCCCAACTA CACCGGCGGG GAGCCCAAGC GTTCCCGGAC GGCCTACACC 
AGACAGCAAG TCCTAGAACT GGAAAAGGAA TTTCATTTTA ACAGGTATCT GACCAGGCGC 
CGTCGGATTG AAATCGCTCA CACCCTGTGT CTTTCTGAGC GCCAGATCAA GATCTGGTTC 
CAGAACCGGA GGATGAAGTG GAAAAAAGAT CACAAACTGC CCAACACCAA GGGCAGATCT 
TCTTCTTCCT CATCTTCCTG CTCCTCTTCA GCTGCCCCCA GCCAGCATTT GCAGCCAATG 
GCCAAGGACC ACCATACGGA CCTGACGACC TTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Hoxd4 ( XM_008761884.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008760106.1 Rattus norvegicus homeo box D4 (Hoxd4), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ORa25980
Clone ID Related Accession (Same CDS sequence)	NM_001105885.1 , XM_008761886.2 , XM_008761883.2 , XM_008761885.2 , XM_008761884.2 , XM_008761887.2
Accession Version	XM_008761884.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 756bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	homeobox protein Hox-D4 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008761884.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCCATGA GTTCGTATAT GGTGAACTCT AAGTACGTGG ACCCCAAGTT TCCTCCGTGC 
GAGGAATATT TGCAGGGTGG CTACCTAGGC GAGCAGGGAG CCGACTACTA CGGCAGCGGT 
GCACAGGGCT CCGACTTCCA GCCCCCGGGG CTCTACCCAC GGCCCGACTT CGGTGAGCAA 
CCCTTCGGAG GCGGCGGGCC CGGGCCTGGC TCAGCGCTGC CCGCGCGGGG TCACGGACAG 
GAGCCGAGCG GCCCGGGAAG TCACTACAGT GCCCCGGGAG AGCCGTGCCC AGCGCCCCCG 
CCTGCGCCCC TGCCTGGCGC TCGGGCCTGC AGCCAGCCCA CCGGCCCCAA GCAGCCGCCC 
CCCGGGACAG CACTCAAGCA GCCCGCTGTG GTCTACCCTT GGATGAAGAA GGTGCATGTG 
AATTCGGTGA ACCCCAACTA CACCGGCGGG GAGCCCAAGC GTTCCCGGAC GGCCTACACC 
AGACAGCAAG TCCTAGAACT GGAAAAGGAA TTTCATTTTA ACAGGTATCT GACCAGGCGC 
CGTCGGATTG AAATCGCTCA CACCCTGTGT CTTTCTGAGC GCCAGATCAA GATCTGGTTC 
CAGAACCGGA GGATGAAGTG GAAAAAAGAT CACAAACTGC CCAACACCAA GGGCAGATCT 
TCTTCTTCCT CATCTTCCTG CTCCTCTTCA GCTGCCCCCA GCCAGCATTT GCAGCCAATG 
GCCAAGGACC ACCATACGGA CCTGACGACC TTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008760106.1
CDS	6870..7625
Translation	MAMSSYMVNSKYVDPKFPPCEEYLQGGYLGEQGADYYGSGAQGSDFQPPGLYPRPDFGEQPFGGGGPGPGSALPARGHGQEPSGPGSHYSAPGEPCPAPPPAPLPGARACSQPTGPKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSCSSSAAPSQHLQPMAKDHHTDLTTL

Target ORF information:

RefSeq Version	XM_008761884.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus homeo box D4 (Hoxd4), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008761884.2

ORF Insert Sequence:

ATGGCCATGA GTTCGTATAT GGTGAACTCT AAGTACGTGG ACCCCAAGTT TCCTCCGTGC 
GAGGAATATT TGCAGGGTGG CTACCTAGGC GAGCAGGGAG CCGACTACTA CGGCAGCGGT 
GCACAGGGCT CCGACTTCCA GCCCCCGGGG CTCTACCCAC GGCCCGACTT CGGTGAGCAA 
CCCTTCGGAG GCGGCGGGCC CGGGCCTGGC TCAGCGCTGC CCGCGCGGGG TCACGGACAG 
GAGCCGAGCG GCCCGGGAAG TCACTACAGT GCCCCGGGAG AGCCGTGCCC AGCGCCCCCG 
CCTGCGCCCC TGCCTGGCGC TCGGGCCTGC AGCCAGCCCA CCGGCCCCAA GCAGCCGCCC 
CCCGGGACAG CACTCAAGCA GCCCGCTGTG GTCTACCCTT GGATGAAGAA GGTGCATGTG 
AATTCGGTGA ACCCCAACTA CACCGGCGGG GAGCCCAAGC GTTCCCGGAC GGCCTACACC 
AGACAGCAAG TCCTAGAACT GGAAAAGGAA TTTCATTTTA ACAGGTATCT GACCAGGCGC 
CGTCGGATTG AAATCGCTCA CACCCTGTGT CTTTCTGAGC GCCAGATCAA GATCTGGTTC 
CAGAACCGGA GGATGAAGTG GAAAAAAGAT CACAAACTGC CCAACACCAA GGGCAGATCT 
TCTTCTTCCT CATCTTCCTG CTCCTCTTCA GCTGCCCCCA GCCAGCATTT GCAGCCAATG 
GCCAAGGACC ACCATACGGA CCTGACGACC TTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Hoxd4 ( XM_008761887.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008760109.1 Rattus norvegicus homeo box D4 (Hoxd4), transcript variant X5, mRNA.

Price & Availability↑

CloneID	ORa25980
Clone ID Related Accession (Same CDS sequence)	NM_001105885.1 , XM_008761886.2 , XM_008761883.2 , XM_008761885.2 , XM_008761884.2 , XM_008761887.2
Accession Version	XM_008761887.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 756bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	homeobox protein Hox-D4 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008761887.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCCATGA GTTCGTATAT GGTGAACTCT AAGTACGTGG ACCCCAAGTT TCCTCCGTGC 
GAGGAATATT TGCAGGGTGG CTACCTAGGC GAGCAGGGAG CCGACTACTA CGGCAGCGGT 
GCACAGGGCT CCGACTTCCA GCCCCCGGGG CTCTACCCAC GGCCCGACTT CGGTGAGCAA 
CCCTTCGGAG GCGGCGGGCC CGGGCCTGGC TCAGCGCTGC CCGCGCGGGG TCACGGACAG 
GAGCCGAGCG GCCCGGGAAG TCACTACAGT GCCCCGGGAG AGCCGTGCCC AGCGCCCCCG 
CCTGCGCCCC TGCCTGGCGC TCGGGCCTGC AGCCAGCCCA CCGGCCCCAA GCAGCCGCCC 
CCCGGGACAG CACTCAAGCA GCCCGCTGTG GTCTACCCTT GGATGAAGAA GGTGCATGTG 
AATTCGGTGA ACCCCAACTA CACCGGCGGG GAGCCCAAGC GTTCCCGGAC GGCCTACACC 
AGACAGCAAG TCCTAGAACT GGAAAAGGAA TTTCATTTTA ACAGGTATCT GACCAGGCGC 
CGTCGGATTG AAATCGCTCA CACCCTGTGT CTTTCTGAGC GCCAGATCAA GATCTGGTTC 
CAGAACCGGA GGATGAAGTG GAAAAAAGAT CACAAACTGC CCAACACCAA GGGCAGATCT 
TCTTCTTCCT CATCTTCCTG CTCCTCTTCA GCTGCCCCCA GCCAGCATTT GCAGCCAATG 
GCCAAGGACC ACCATACGGA CCTGACGACC TTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008760109.1
CDS	5206..5961
Translation	MAMSSYMVNSKYVDPKFPPCEEYLQGGYLGEQGADYYGSGAQGSDFQPPGLYPRPDFGEQPFGGGGPGPGSALPARGHGQEPSGPGSHYSAPGEPCPAPPPAPLPGARACSQPTGPKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSCSSSAAPSQHLQPMAKDHHTDLTTL

Target ORF information:

RefSeq Version	XM_008761887.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus homeo box D4 (Hoxd4), transcript variant X5, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008761887.2

ORF Insert Sequence:

ATGGCCATGA GTTCGTATAT GGTGAACTCT AAGTACGTGG ACCCCAAGTT TCCTCCGTGC 
GAGGAATATT TGCAGGGTGG CTACCTAGGC GAGCAGGGAG CCGACTACTA CGGCAGCGGT 
GCACAGGGCT CCGACTTCCA GCCCCCGGGG CTCTACCCAC GGCCCGACTT CGGTGAGCAA 
CCCTTCGGAG GCGGCGGGCC CGGGCCTGGC TCAGCGCTGC CCGCGCGGGG TCACGGACAG 
GAGCCGAGCG GCCCGGGAAG TCACTACAGT GCCCCGGGAG AGCCGTGCCC AGCGCCCCCG 
CCTGCGCCCC TGCCTGGCGC TCGGGCCTGC AGCCAGCCCA CCGGCCCCAA GCAGCCGCCC 
CCCGGGACAG CACTCAAGCA GCCCGCTGTG GTCTACCCTT GGATGAAGAA GGTGCATGTG 
AATTCGGTGA ACCCCAACTA CACCGGCGGG GAGCCCAAGC GTTCCCGGAC GGCCTACACC 
AGACAGCAAG TCCTAGAACT GGAAAAGGAA TTTCATTTTA ACAGGTATCT GACCAGGCGC 
CGTCGGATTG AAATCGCTCA CACCCTGTGT CTTTCTGAGC GCCAGATCAA GATCTGGTTC 
CAGAACCGGA GGATGAAGTG GAAAAAAGAT CACAAACTGC CCAACACCAA GGGCAGATCT 
TCTTCTTCCT CATCTTCCTG CTCCTCTTCA GCTGCCCCCA GCCAGCATTT GCAGCCAATG 
GCCAAGGACC ACCATACGGA CCTGACGACC TTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Uncovering early response of gene regulatory networks in ESCs by systematic induction of transcription factors.
Cell stem cell5(4)420-33(2009 Oct)
Nishiyama A,Xin L,Sharov AA,Thomas M,Mowrer G,Meyers E,Piao Y,Mehta S,Yee S,Nakatake Y,Stagg C,Sharova L,Correa-Cerro LS,Bassey U,Hoang H,Kim E,Tapnio R,Qian Y,Dudekula D,Zalzman M,Li M,Falco G,Yang HT,Lee SL,Monti M,Stanghellini I,Islam MN,Nagaraja R,Goldberg I,Wang W,Longo DL,Schlessinger D,Ko MS

Compound mutants for the paralogous hoxa-4, hoxb-4, and hoxd-4 genes show more complete homeotic transformations and a dose-dependent increase in the number of vertebrae transformed.
Genes & development9(13)1667-77(1995 Jul)
Horan GS,Ram?rez-Solis R,Featherstone MS,Wolgemuth DJ,Bradley A,Behringer RR

Mutations in paralogous Hox genes result in overlapping homeotic transformations of the axial skeleton: evidence for unique and redundant function.
Developmental biology169(1)359-72(1995 May)
Horan GS,Kov?cs EN,Behringer RR,Featherstone MS

HOX4 genes encode transcription factors with potential auto- and cross-regulatory capacities.
The EMBO journal10(13)4177-87(1991 Dec)
Zappavigna V,Renucci A,Izpis?a-Belmonte JC,Urier G,Peschle C,Duboule D

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Hoxd4 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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