ORF » Species Summary » Populus trichocarpa » POPTR_0004s23190g cDNA ORF clone

POPTR_0004s23190g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0004s23190g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0004s23190g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa11376 XM_006384964.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0004s23190g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
OPa427745 XM_006384964.2
Latest version!		 Populus trichocarpa protein WHAT'S THIS FACTOR 1 homolog (LOC18098311), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0004s23190g ( XM_006384964.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006385026.1 Populus trichocarpa hypothetical protein (POPTR_0004s23190g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa11376
    Clone ID Related Accession (Same CDS sequence) XM_006384964.1
    Accession Version XM_006384964.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1299bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008470). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGTCTCTCT ACAGCACCAA ACTCCCACAC CAACTCAACC AAGCCAGGAC CTTCATAGCT 
    GCCAGGATCA AATGGGCCTG TGACCCTTAC CTTGACACAG CTGTTTCCAA AGAAAAAGAC 
    TTGAAACAAG TCATTTCTAT CAAGAACCAA CTAATTTCCT CTCCCTCCAA ATCCCTCCCT 
    CTTTCCTCTC TTTCCCTTCT AAAACCCTAC TTCAACATCT CCACTACAGC CCTCAATTTC 
    TTCCATAAGT ACTCCACAGT TTTCTCTCAA TTCCAGCCCT CCCCTTCCCT GCCCTTCCAC 
    ATCAAACTCA CCCCTCAAGC TATCTCACTT CACAAGGAGG AGCAACTCAT TCTAAAGTCA 
    CAACCTTTAC GTGATGACAC CATAAAAAGG TTAGCTAAAC TCTTAATGCT TTCCGGGGCA 
    AAAAGATTGC CTTTGCATAT TGTTGATAGG TTCAAGTATG ATTTGGGTTT GCCTCATGAT 
    TATATTACTG CCCTTTTATC AGATTATCCT GAATATTTCA ATGTCTGCGA GGATAAAGAT 
    TGTTTAACTA ATAAAGACAC GTTCTTTTTA GAGCTGGTTT CTTGGAAAGA TGAGTTAGCT 
    GTGTCTGAAA TGGAGAAAAG AGTGTCACTT GAGGATTTGA GGAATGTTAA GAGAGGGGAG 
    AGAATTGGGT TTCCTTTAAA TTTCCCAAAT GGGTTTGATT TAAAGAAGAA AGTGAGAGAT 
    TGGGTTTTCG AATGGCAAGG TTTGCCATAC ATATCGCCCT ATGAAAATGC TTTTCATTTG 
    AATCCCAATG GGGATCAAGC TGAGAAGTGG ACTGTCACGG TTTTACATGA GTTGTTGTGG 
    TTGTTAGTGT CAAAGAAGAC GGAGAAAGAG AATGTGCTTC AATTGGGGGA TTATTTGGGG 
    TTTGGGAACA GGTTTAATAA GGCTTTGGTG CATCATCCAG GGATTTTTTA TGTTTCCAAT 
    AAGATTAGGA CACAGACTGT GGTGCTTAGA GAGGCTTATA GGAAGGGCTT CTTAATGCAT 
    AAGCATCTTC TAATGGGAAT GAGGTTTAGG TATATTCGTC TTATGAGTAA AGCTAAGAAG 
    AAGAGAAGAA AATCAGTTGG TGGTGTTTCA CATTCTCAAT TGCAAAGGCA GGTTTCATCT 
    ACCAAAAAAG GGATAGAAAG AAAAGCTAAA TATAAAAGCA GGGAGGAAGA AGAAGAGAGA 
    TCAAATGACT CTTTAGAATC TGAATTTGAG GATGTGGGGT CTTCAGACTC CAACCTTGAG 
    GATGCGAATA GTGATGGGAC GATGAAGATG AAGATGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006385026.1
    CDS1..1299
    Translation

    Target ORF information:

    RefSeq Version XM_006384964.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0004s23190g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006384964.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGTCTCTCT ACAGCACCAA ACTCCCACAC CAACTCAACC AAGCCAGGAC CTTCATAGCT 
    GCCAGGATCA AATGGGCCTG TGACCCTTAC CTTGACACAG CTGTTTCCAA AGAAAAAGAC 
    TTGAAACAAG TCATTTCTAT CAAGAACCAA CTAATTTCCT CTCCCTCCAA ATCCCTCCCT 
    CTTTCCTCTC TTTCCCTTCT AAAACCCTAC TTCAACATCT CCACTACAGC CCTCAATTTC 
    TTCCATAAGT ACTCCACAGT TTTCTCTCAA TTCCAGCCCT CCCCTTCCCT GCCCTTCCAC 
    ATCAAACTCA CCCCTCAAGC TATCTCACTT CACAAGGAGG AGCAACTCAT TCTAAAGTCA 
    CAACCTTTAC GTGATGACAC CATAAAAAGG TTAGCTAAAC TCTTAATGCT TTCCGGGGCA 
    AAAAGATTGC CTTTGCATAT TGTTGATAGG TTCAAGTATG ATTTGGGTTT GCCTCATGAT 
    TATATTACTG CCCTTTTATC AGATTATCCT GAATATTTCA ATGTCTGCGA GGATAAAGAT 
    TGTTTAACTA ATAAAGACAC GTTCTTTTTA GAGCTGGTTT CTTGGAAAGA TGAGTTAGCT 
    GTGTCTGAAA TGGAGAAAAG AGTGTCACTT GAGGATTTGA GGAATGTTAA GAGAGGGGAG 
    AGAATTGGGT TTCCTTTAAA TTTCCCAAAT GGGTTTGATT TAAAGAAGAA AGTGAGAGAT 
    TGGGTTTTCG AATGGCAAGG TTTGCCATAC ATATCGCCCT ATGAAAATGC TTTTCATTTG 
    AATCCCAATG GGGATCAAGC TGAGAAGTGG ACTGTCACGG TTTTACATGA GTTGTTGTGG 
    TTGTTAGTGT CAAAGAAGAC GGAGAAAGAG AATGTGCTTC AATTGGGGGA TTATTTGGGG 
    TTTGGGAACA GGTTTAATAA GGCTTTGGTG CATCATCCAG GGATTTTTTA TGTTTCCAAT 
    AAGATTAGGA CACAGACTGT GGTGCTTAGA GAGGCTTATA GGAAGGGCTT CTTAATGCAT 
    AAGCATCTTC TAATGGGAAT GAGGTTTAGG TATATTCGTC TTATGAGTAA AGCTAAGAAG 
    AAGAGAAGAA AATCAGTTGG TGGTGTTTCA CATTCTCAAT TGCAAAGGCA GGTTTCATCT 
    ACCAAAAAAG GGATAGAAAG AAAAGCTAAA TATAAAAGCA GGGAGGAAGA AGAAGAGAGA 
    TCAAATGACT CTTTAGAATC TGAATTTGAG GATGTGGGGT CTTCAGACTC CAACCTTGAG 
    GATGCGAATA GTGATGGGAC GATGAAGATG AAGATGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0004s23190g ( XM_006384964.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006385026.2 Populus trichocarpa protein WHAT'S THIS FACTOR 1 homolog (LOC18098311), mRNA.
    Price & Availability↑
    CloneID OPa427745
    Clone ID Related Accession (Same CDS sequence) XM_006384964.2
    Accession Version XM_006384964.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1305bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product protein WHAT'S THIS FACTOR 1 homolog
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037288.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006384964.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGATGATGT CTCTCTACAG CACCAAACTC CCACACCAAC TCAACCAAGC CAGGACCTTC 
    ATAGCTGCCA GGATCAAATG GGCCTGTGAC CCTTACCTAG ACACAGCTGT TTCCAAAGAA 
    AAAGACTTGA AACAAGTCAT TTCTATCAAG AACCAACTAA TTTCCTCTCC CTCCAAATCC 
    CTCCCTCTTT CCTCTCTTTC CCTTCTAAAA CCCTACTTCA ACATCTCCAC TACAGCCCTC 
    AATTTCTTCC ATAAGTACTC CACAGTTTTC TCTCAATTCC AGCCCTCCCC TTCCCTGCCC 
    TTCCACATCA AACTCACCCC TCAAGCTATC TCACTTCACA AGGAGGAGCA ACTCATTCTA 
    AAGTCACAAC CTTTACGTGA TGACACCATA AAAAGGTTAG CTAAACTCTT AATGCTTTCC 
    GGGGCAAAAA GATTGCCTTT GCATATTGTT GATAGGTTCA AGTATGATTT GGGTTTGCCT 
    CATGATTATA TTACTGCCCT TTTATCAGAT TATCCTGAAT ATTTCAATGT CTGCGAGGAT 
    AAAGATTGTT TAACTAATAA AGACACGTTC TTTTTAGAGC TGGTTTCTTG GAAAGATGAG 
    TTAGCTGTGT CTGAAATGGA GAAAAGAGTG TCACTTGAGG ATTTGAGGAA TGTTAAGAGA 
    GGGGAGAGAA TTGGGTTTCC TTTAAATTTC CCAAATGGGT TTGATTTAAA GAAGAAAGTG 
    AGAGATTGGG TTTTCGAATG GCAAGGTTTG CCATACATAT CGCCCTATGA AAATGCTTTT 
    CATTTGAATC CCAATGGGGA TCAAGCTGAG AAGTGGACTG TCACGGTTTT ACATGAGTTG 
    TTGTGGTTGT TAGTGTCAAA GAAGACGGAG AAAGAGAATG TGCTTCAATT GGGGGATTAT 
    TTGGGGTTTG GGAACAGGTT TAATAAGGCT TTGGTGCATC ATCCAGGGAT TTTTTATGTT 
    TCCAATAAGA TTAGGACACA GACTGTGGTG CTTAGAGAGG CTTATAGGAA GGGCTTCTTA 
    ATGCATAAGC ATCTTCTAAT GGGAATGAGG TTTAGGTATA TTCGTCTTAT GAGTAAAGCT 
    AAGAAGAAGA GAAGAAAATC AGTTGGTGGT GTTTCACATT CTCAATTGCA AAGGCAGGTT 
    TCATCTACCA AAAAAGGGAT AGAAAGAAAA GCTAAATATA AAAGCAGGGA GGAAGAAGAA 
    GAGAGATCAA ATGACTCTTT AGAATCTGAA TTTGAGGATG TGGGGTCTTC AGACTCCAAC 
    CTTGAGGATG CGAATAGTGA TGGGACGATG AAGATGAAGA TGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006385026.2
    CDS142..1446
    Translation

    Target ORF information:

    RefSeq Version XM_006384964.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa protein WHAT'S THIS FACTOR 1 homolog (LOC18098311), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006384964.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGATGATGT CTCTCTACAG CACCAAACTC CCACACCAAC TCAACCAAGC CAGGACCTTC 
    ATAGCTGCCA GGATCAAATG GGCCTGTGAC CCTTACCTAG ACACAGCTGT TTCCAAAGAA 
    AAAGACTTGA AACAAGTCAT TTCTATCAAG AACCAACTAA TTTCCTCTCC CTCCAAATCC 
    CTCCCTCTTT CCTCTCTTTC CCTTCTAAAA CCCTACTTCA ACATCTCCAC TACAGCCCTC 
    AATTTCTTCC ATAAGTACTC CACAGTTTTC TCTCAATTCC AGCCCTCCCC TTCCCTGCCC 
    TTCCACATCA AACTCACCCC TCAAGCTATC TCACTTCACA AGGAGGAGCA ACTCATTCTA 
    AAGTCACAAC CTTTACGTGA TGACACCATA AAAAGGTTAG CTAAACTCTT AATGCTTTCC 
    GGGGCAAAAA GATTGCCTTT GCATATTGTT GATAGGTTCA AGTATGATTT GGGTTTGCCT 
    CATGATTATA TTACTGCCCT TTTATCAGAT TATCCTGAAT ATTTCAATGT CTGCGAGGAT 
    AAAGATTGTT TAACTAATAA AGACACGTTC TTTTTAGAGC TGGTTTCTTG GAAAGATGAG 
    TTAGCTGTGT CTGAAATGGA GAAAAGAGTG TCACTTGAGG ATTTGAGGAA TGTTAAGAGA 
    GGGGAGAGAA TTGGGTTTCC TTTAAATTTC CCAAATGGGT TTGATTTAAA GAAGAAAGTG 
    AGAGATTGGG TTTTCGAATG GCAAGGTTTG CCATACATAT CGCCCTATGA AAATGCTTTT 
    CATTTGAATC CCAATGGGGA TCAAGCTGAG AAGTGGACTG TCACGGTTTT ACATGAGTTG 
    TTGTGGTTGT TAGTGTCAAA GAAGACGGAG AAAGAGAATG TGCTTCAATT GGGGGATTAT 
    TTGGGGTTTG GGAACAGGTT TAATAAGGCT TTGGTGCATC ATCCAGGGAT TTTTTATGTT 
    TCCAATAAGA TTAGGACACA GACTGTGGTG CTTAGAGAGG CTTATAGGAA GGGCTTCTTA 
    ATGCATAAGC ATCTTCTAAT GGGAATGAGG TTTAGGTATA TTCGTCTTAT GAGTAAAGCT 
    AAGAAGAAGA GAAGAAAATC AGTTGGTGGT GTTTCACATT CTCAATTGCA AAGGCAGGTT 
    TCATCTACCA AAAAAGGGAT AGAAAGAAAA GCTAAATATA AAAGCAGGGA GGAAGAAGAA 
    GAGAGATCAA ATGACTCTTT AGAATCTGAA TTTGAGGATG TGGGGTCTTC AGACTCCAAC 
    CTTGAGGATG CGAATAGTGA TGGGACGATG AAGATGAAGA TGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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