HGD cDNA ORF clone, Pan troglodytes(chimpanzee)

Gene
Clones
gRNAs

Summary

Gene Symbol	HGD
Entrez Gene ID	460613
Full Name	homogentisate 1,2-dioxygenase
General protein information	Preferred Names homogentisate 1,2-dioxygenase Names homogentisate 1,2-dioxygenase homogentisate 1,2-dioxygenase (homogentisate oxidase)
Gene Type	protein-coding
Organism	Pan troglodytes(chimpanzee)

mRNA and Protein(s)

mRNA	Protein	Name
XM_001164938.3	XP_001164938.1	homogentisate 1,2-dioxygenase
XM_001164938.4	XP_001164938.1	homogentisate 1,2-dioxygenase

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	hgo	NP_523544.2
Oryza sativa (rice)	Os06g0103300	NP_001056540.1
Homo sapiens (human)	HGD	NP_000178.2
Bos taurus (cattle)	HGD	NP_001138324.1
Danio rerio (zebrafish)	hgd	NP_694498.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP009609	XP_318638.4
Caenorhabditis elegans (roundworm)	hgo-1	NP_492433.1
Canis lupus familiaris (dog)	HGD	XP_535754.3
Mus musculus (house mouse)	Hgd	NP_038575.2
Gallus gallus (chicken)	HGD	XP_416553.1
Magnaporthe oryzae (rice blast fungus)	MGG_00431	XP_003718640.1
Xenopus tropicalis (tropical clawed frog)	hgd	XP_004912503.1
Pan troglodytes (chimpanzee)	HGD	XP_001164938.1
	HGD	XP_001110996.1
Rattus norvegicus (Norway rat)	Hgd	NP_001012145.1
Neurospora crassa	NCU05499	XP_960461.1
Arabidopsis thaliana (thale cress)	HGO	NP_851187.1

Gene Ontology

The following HGD gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HGD cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OPc07035	XM_001164938.4 Latest version!	Pan troglodytes homogentisate 1,2-dioxygenase (HGD), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
View Old Accession Versions >>
OPc07035	XM_001164938.3	Pan troglodytes homogentisate 1,2-dioxygenase (HGD), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

HGD ( XM_001164938.3 ) cDNA ORF clone, Pan troglodytes(chimpanzee) -> XP_001164938.1 Pan troglodytes homogentisate 1,2-dioxygenase (HGD), mRNA.

Price & Availability↑

CloneID	OPc07035
Clone ID Related Accession (Same CDS sequence)	XM_001164938.3 , XM_001164938.4
Accession Version	XM_001164938.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1338bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-01
Organism	Pan troglodytes(chimpanzee)
Product	homogentisate 1,2-dioxygenase
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006490.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 2, 2016 this sequence version replaced XM_001164938.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTGAGT TAAAGTACAT TTCTGGATTT GGGAATGAGT GTTCTTCAGA GGATCCTCGC 
TGCCCAGGTT CCCTGCCAGA AGGACAGAAT AATCCTCAGG TCTGCCCCTA CAATCTCTAT 
GCTGAGCAGC TCTCAGGATC GGCTTTCACT TGTCCACGGA GCACCAATAA GAGAAGCTGG 
CTGTATAGGA TTCTACCTTC AGTTTCTCAC AAGCCCTTTG AATCCATTGA CGAAGGCCAT 
GTCACTCACA ACTGGGATGA AGTTGATCCT GATCCTAACC AGCTTAGATG GAAACCATTT 
GAGATTCCAA AAGCATCTCA GAAGAAAGTA GACTTTGTGA GTGGCCTGCA TACCTTGTGT 
GGAGCTGGAG ACATAAAGTC TAACAATGGG CTTGCTATCC ACATTTTCCT CTGCAATACC 
TCCATGGAGA ACAGATGCTT TTACAATTCA GATGGGGACT TCTTGATTGT TCCGCAGAAA 
GGGAACCTTC TCATTTACAC CGAGTTTGGC AAGATGCTTG TACAGCCCAA TGAGATCTGC 
GTCATTCAGA GAGGAATGCG GTTCAGCATA GATGTCTTTG AGGAGACCAG GGGCTACATC 
TTGGAGGTCT ATGGTGTCCA CTTTGAGTTA CCTGACCTTG GACCAATTGG GGCCAATGGC 
TTGGCCAATC CTCGTGATTT CTTGATACCC ATTGCCTGGT ATGAGGATCG CCAAGCACCA 
GGTGGTTACA CGGTCATTAA TAAATACCAG GGCAAGCTGT TTGCTGCCAA ACAGGATGTC 
TCCCCGTTCA ATGTTGTGGC CTGGCACGGG AATTATACAC CCTACAAGTA CAACCTGAAG 
AATTTCATGG TTATCAACTC AGTGGCCTTT GACCATGCAG ACCCATCCAT TTTCACAGTA 
TTGACTGCTA AGTCTGTCCG CCCTGGAGTG GCCATTGCTG ATTTTGTCAT CTTCCCACCT 
CGATGGGGGG TTGCTGATAA GACCTTCAGG CCTCCTTATT ACCATAGGAA CTGCATGAGT 
GAGTTCATGG GACTCATCCG AGGTCACTAT GAGGCAAAGC AAGGTGGGTT CCTGCCAGGG 
GGAGGGAGTC TACACAGCAC AATGACCCCC CATGGACCTG ATGCTGACTG CTTTGAGAAG 
GCCAGCAAGG CCAAGCTGGC ACCTGAGAGG ATTGCCGATG GCACCATGGC ATTTATGTTT 
GAATCATCTT TAAGTCTGGC GGTCACAAAG TGGGGACTCA AGGCCTCCAG GTGTTTGGAT 
GAGAACTACC ACAAGTGCTG GGAGCCACTC AAGAGCCACT TCACTCCCAA CTCCAGGAAC 
CCAGCAGAAC CTAATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001164938.1
CDS	458..1795
Translation	MAELKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQLSGSAFTCPRSTNKRSWLYRILPSVSHKPFESIDEGHVTHNWDEVDPDPNQLRWKPFEIPKASQKKVDFVSGLHTLCGAGDIKSNNGLAIHIFLCNTSMENRCFYNSDGDFLIVPQKGNLLIYTEFGKMLVQPNEICVIQRGMRFSIDVFEETRGYILEVYGVHFELPDLGPIGANGLANPRDFLIPIAWYEDRQAPGGYTVINKYQGKLFAAKQDVSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPSIFTVLTAKSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLHSTMTPHGPDADCFEKASKAKLAPERIADGTMAFMFESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHFTPNSRNPAEPN

Target ORF information:

RefSeq Version	XM_001164938.3
Organism	Pan troglodytes(chimpanzee)
Definition	Pan troglodytes homogentisate 1,2-dioxygenase (HGD), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001164938.3

ORF Insert Sequence:

ATGGCTGAGT TAAAGTACAT TTCTGGATTT GGGAATGAGT GTTCTTCAGA GGATCCTCGC 
TGCCCAGGTT CCCTGCCAGA AGGACAGAAT AATCCTCAGG TCTGCCCCTA CAATCTCTAT 
GCTGAGCAGC TCTCAGGATC GGCTTTCACT TGTCCACGGA GCACCAATAA GAGAAGCTGG 
CTGTATAGGA TTCTACCTTC AGTTTCTCAC AAGCCCTTTG AATCCATTGA CGAAGGCCAT 
GTCACTCACA ACTGGGATGA AGTTGATCCT GATCCTAACC AGCTTAGATG GAAACCATTT 
GAGATTCCAA AAGCATCTCA GAAGAAAGTA GACTTTGTGA GTGGCCTGCA TACCTTGTGT 
GGAGCTGGAG ACATAAAGTC TAACAATGGG CTTGCTATCC ACATTTTCCT CTGCAATACC 
TCCATGGAGA ACAGATGCTT TTACAATTCA GATGGGGACT TCTTGATTGT TCCGCAGAAA 
GGGAACCTTC TCATTTACAC CGAGTTTGGC AAGATGCTTG TACAGCCCAA TGAGATCTGC 
GTCATTCAGA GAGGAATGCG GTTCAGCATA GATGTCTTTG AGGAGACCAG GGGCTACATC 
TTGGAGGTCT ATGGTGTCCA CTTTGAGTTA CCTGACCTTG GACCAATTGG GGCCAATGGC 
TTGGCCAATC CTCGTGATTT CTTGATACCC ATTGCCTGGT ATGAGGATCG CCAAGCACCA 
GGTGGTTACA CGGTCATTAA TAAATACCAG GGCAAGCTGT TTGCTGCCAA ACAGGATGTC 
TCCCCGTTCA ATGTTGTGGC CTGGCACGGG AATTATACAC CCTACAAGTA CAACCTGAAG 
AATTTCATGG TTATCAACTC AGTGGCCTTT GACCATGCAG ACCCATCCAT TTTCACAGTA 
TTGACTGCTA AGTCTGTCCG CCCTGGAGTG GCCATTGCTG ATTTTGTCAT CTTCCCACCT 
CGATGGGGGG TTGCTGATAA GACCTTCAGG CCTCCTTATT ACCATAGGAA CTGCATGAGT 
GAGTTCATGG GACTCATCCG AGGTCACTAT GAGGCAAAGC AAGGTGGGTT CCTGCCAGGG 
GGAGGGAGTC TACACAGCAC AATGACCCCC CATGGACCTG ATGCTGACTG CTTTGAGAAG 
GCCAGCAAGG CCAAGCTGGC ACCTGAGAGG ATTGCCGATG GCACCATGGC ATTTATGTTT 
GAATCATCTT TAAGTCTGGC GGTCACAAAG TGGGGACTCA AGGCCTCCAG GTGTTTGGAT 
GAGAACTACC ACAAGTGCTG GGAGCCACTC AAGAGCCACT TCACTCCCAA CTCCAGGAAC 
CCAGCAGAAC CTAATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

HGD ( XM_001164938.4 ) cDNA ORF clone, Pan troglodytes(chimpanzee) -> XP_001164938.1 Pan troglodytes homogentisate 1,2-dioxygenase (HGD), mRNA.

Price & Availability↑

CloneID	OPc07035
Clone ID Related Accession (Same CDS sequence)	XM_001164938.3 , XM_001164938.4
Accession Version	XM_001164938.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1338bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-03-19
Organism	Pan troglodytes(chimpanzee)
Product	homogentisate 1,2-dioxygenase
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036882.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_001164938.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTGAGT TAAAGTACAT TTCTGGATTT GGGAATGAGT GTTCTTCAGA GGATCCTCGC 
TGCCCAGGTT CCCTGCCAGA AGGACAGAAT AATCCTCAGG TCTGCCCCTA CAATCTCTAT 
GCTGAGCAGC TCTCAGGATC GGCTTTCACT TGTCCACGGA GCACCAATAA GAGAAGCTGG 
CTGTATAGGA TTCTACCTTC AGTTTCTCAC AAGCCCTTTG AATCCATTGA CGAAGGCCAT 
GTCACTCACA ACTGGGATGA AGTTGATCCT GATCCTAACC AGCTTAGATG GAAACCATTT 
GAGATTCCAA AAGCATCTCA GAAGAAAGTA GACTTTGTGA GTGGCCTGCA TACCTTGTGT 
GGAGCTGGAG ACATAAAGTC TAACAATGGG CTTGCTATCC ACATTTTCCT CTGCAATACC 
TCCATGGAGA ACAGATGCTT TTACAATTCA GATGGGGACT TCTTGATTGT TCCGCAGAAA 
GGGAACCTTC TCATTTACAC CGAGTTTGGC AAGATGCTTG TACAGCCCAA TGAGATCTGC 
GTCATTCAGA GAGGAATGCG GTTCAGCATA GATGTCTTTG AGGAGACCAG GGGCTACATC 
TTGGAGGTCT ATGGTGTCCA CTTTGAGTTA CCTGACCTTG GACCAATTGG GGCCAATGGC 
TTGGCCAATC CTCGTGATTT CTTGATACCC ATTGCCTGGT ATGAGGATCG CCAAGCACCA 
GGTGGTTACA CGGTCATTAA TAAATACCAG GGCAAGCTGT TTGCTGCCAA ACAGGATGTC 
TCCCCGTTCA ATGTTGTGGC CTGGCACGGG AATTATACAC CCTACAAGTA CAACCTGAAG 
AATTTCATGG TTATCAACTC AGTGGCCTTT GACCATGCAG ACCCATCCAT TTTCACAGTA 
TTGACTGCTA AGTCTGTCCG CCCTGGAGTG GCCATTGCTG ATTTTGTCAT CTTCCCACCT 
CGATGGGGGG TTGCTGATAA GACCTTCAGG CCTCCTTATT ACCATAGGAA CTGCATGAGT 
GAGTTCATGG GACTCATCCG AGGTCACTAT GAGGCAAAGC AAGGTGGGTT CCTGCCAGGG 
GGAGGGAGTC TACACAGCAC AATGACCCCC CATGGACCTG ATGCTGACTG CTTTGAGAAG 
GCCAGCAAGG CCAAGCTGGC ACCTGAGAGG ATTGCCGATG GCACCATGGC ATTTATGTTT 
GAATCATCTT TAAGTCTGGC GGTCACAAAG TGGGGACTCA AGGCCTCCAG GTGTTTGGAT 
GAGAACTACC ACAAGTGCTG GGAGCCACTC AAGAGCCACT TCACTCCCAA CTCCAGGAAC 
CCAGCAGAAC CTAATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001164938.1
CDS	458..1795
Translation	MAELKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQLSGSAFTCPRSTNKRSWLYRILPSVSHKPFESIDEGHVTHNWDEVDPDPNQLRWKPFEIPKASQKKVDFVSGLHTLCGAGDIKSNNGLAIHIFLCNTSMENRCFYNSDGDFLIVPQKGNLLIYTEFGKMLVQPNEICVIQRGMRFSIDVFEETRGYILEVYGVHFELPDLGPIGANGLANPRDFLIPIAWYEDRQAPGGYTVINKYQGKLFAAKQDVSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPSIFTVLTAKSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLHSTMTPHGPDADCFEKASKAKLAPERIADGTMAFMFESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHFTPNSRNPAEPN

Target ORF information:

RefSeq Version	XM_001164938.4
Organism	Pan troglodytes(chimpanzee)
Definition	Pan troglodytes homogentisate 1,2-dioxygenase (HGD), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001164938.4

ORF Insert Sequence:

ATGGCTGAGT TAAAGTACAT TTCTGGATTT GGGAATGAGT GTTCTTCAGA GGATCCTCGC 
TGCCCAGGTT CCCTGCCAGA AGGACAGAAT AATCCTCAGG TCTGCCCCTA CAATCTCTAT 
GCTGAGCAGC TCTCAGGATC GGCTTTCACT TGTCCACGGA GCACCAATAA GAGAAGCTGG 
CTGTATAGGA TTCTACCTTC AGTTTCTCAC AAGCCCTTTG AATCCATTGA CGAAGGCCAT 
GTCACTCACA ACTGGGATGA AGTTGATCCT GATCCTAACC AGCTTAGATG GAAACCATTT 
GAGATTCCAA AAGCATCTCA GAAGAAAGTA GACTTTGTGA GTGGCCTGCA TACCTTGTGT 
GGAGCTGGAG ACATAAAGTC TAACAATGGG CTTGCTATCC ACATTTTCCT CTGCAATACC 
TCCATGGAGA ACAGATGCTT TTACAATTCA GATGGGGACT TCTTGATTGT TCCGCAGAAA 
GGGAACCTTC TCATTTACAC CGAGTTTGGC AAGATGCTTG TACAGCCCAA TGAGATCTGC 
GTCATTCAGA GAGGAATGCG GTTCAGCATA GATGTCTTTG AGGAGACCAG GGGCTACATC 
TTGGAGGTCT ATGGTGTCCA CTTTGAGTTA CCTGACCTTG GACCAATTGG GGCCAATGGC 
TTGGCCAATC CTCGTGATTT CTTGATACCC ATTGCCTGGT ATGAGGATCG CCAAGCACCA 
GGTGGTTACA CGGTCATTAA TAAATACCAG GGCAAGCTGT TTGCTGCCAA ACAGGATGTC 
TCCCCGTTCA ATGTTGTGGC CTGGCACGGG AATTATACAC CCTACAAGTA CAACCTGAAG 
AATTTCATGG TTATCAACTC AGTGGCCTTT GACCATGCAG ACCCATCCAT TTTCACAGTA 
TTGACTGCTA AGTCTGTCCG CCCTGGAGTG GCCATTGCTG ATTTTGTCAT CTTCCCACCT 
CGATGGGGGG TTGCTGATAA GACCTTCAGG CCTCCTTATT ACCATAGGAA CTGCATGAGT 
GAGTTCATGG GACTCATCCG AGGTCACTAT GAGGCAAAGC AAGGTGGGTT CCTGCCAGGG 
GGAGGGAGTC TACACAGCAC AATGACCCCC CATGGACCTG ATGCTGACTG CTTTGAGAAG 
GCCAGCAAGG CCAAGCTGGC ACCTGAGAGG ATTGCCGATG GCACCATGGC ATTTATGTTT 
GAATCATCTT TAAGTCTGGC GGTCACAAAG TGGGGACTCA AGGCCTCCAG GTGTTTGGAT 
GAGAACTACC ACAAGTGCTG GGAGCCACTC AAGAGCCACT TCACTCCCAA CTCCAGGAAC 
CCAGCAGAAC CTAATTGA