Gene Symbol | LOC705996 |
Entrez Gene ID | 705996 |
Full Name | apolipoprotein B mRNA editing enzyme catalytic subunit 3D |
Synonyms | Apobec3DE |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » LOC705996 cDNA ORF clone
Gene Symbol | LOC705996 |
Entrez Gene ID | 705996 |
Full Name | apolipoprotein B mRNA editing enzyme catalytic subunit 3D |
Synonyms | Apobec3DE |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
NM_001346002.1 | NP_001332931.1 | DNA dC->dU-editing enzyme APOBEC-3D |
XM_015150378.2 | XP_015005864.2 | DNA dC->dU-editing enzyme APOBEC-3D isoform X1 |
XM_015150378.1 | XP_015005864.1 | DNA dC->dU-editing enzyme APOBEC-3F isoform X1 |
Analysis of the N-terminal positively charged residues of the simian immunodeficiency virus Vif reveals a critical amino acid required for the antagonism of rhesus APOBEC3D, G, and H.
Schmitt K, Katuwal M, Wang Y, Li C, Stephens EB
Virology449140-9(2014 Jan)
In vivo hypermutation of xenotropic murine leukemia virus-related virus DNA in peripheral blood mononuclear cells of rhesus macaque by APOBEC3 proteins.
Zhang A, Bogerd H, Villinger F, Das Gupta J, Dong B, Klein EA, Hackett J Jr, Schochetman G, Cullen BR, Silverman RH
Virology421(1)28-33(2011 Dec)
Human and rhesus APOBEC3D, APOBEC3F, APOBEC3G, and APOBEC3H demonstrate a conserved capacity to restrict Vif-deficient HIV-1.
Hultquist JF, Lengyel JA, Refsland EW, LaRue RS, Lackey L, Brown WL, Harris RS
Journal of virology85(21)11220-34(2011 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The arginine at position 14 of the SIV Vif is a critical residue for virus restriction by rhA3D, rhA3G and rhA3H.
Title: Analysis of the N-terminal positively charged residues of the simian immunodeficiency virus Vif reveals a critical amino acid required for the antagonism of rhesus APOBEC3D, G, and H.
APOBEC3 proteins restrict xenotropic murine leukemia virus-related virus infections in a Macaca mulatta model.
Title: In vivo hypermutation of xenotropic murine leukemia virus-related virus DNA in peripheral blood mononuclear cells of rhesus macaque by APOBEC3 proteins.
The following LOC705996 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC705996 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb61896 | |
Clone ID Related Accession (Same CDS sequence) | XM_015150378.2 | |
Accession Version | XM_015150378.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1188bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | DNA dC->dU-editing enzyme APOBEC-3D isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041763.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015150378.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATCCAC AGATCAGAAA TCCGATGGAG CGGATGTATC GACGCACATT CAACTACAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015005864.2 |
CDS | 272..1459 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015150378.2 |
1 | ATGAATCCAC AGATCAGAAA TCCGATGGAG CGGATGTATC GACGCACATT CAACTACAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb57556 | |
Clone ID Related Accession (Same CDS sequence) | NM_001346002.1 | |
Accession Version | NM_001346002.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1125bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-27 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | DNA dC->dU-editing enzyme APOBEC-3D | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JSUE03005528.1. On Sep 17, 2016 this sequence version replaced XM_001094328.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMEA4688320, SAMEA4688321 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGAATCCAC AGATCAGAAA TCCGATGGAG CGGATGTATC GACGCACATT CAACTACAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001332931.1 |
CDS | 187..1311 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001346002.1 |
1 | ATGAATCCAC AGATCAGAAA TCCGATGGAG CGGATGTATC GACGCACATT CAACTACAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb41753 | |
Clone ID Related Accession (Same CDS sequence) | XM_015150378.1 | |
Accession Version | XM_015150378.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1188bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | DNA dC->dU-editing enzyme APOBEC-3F isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805257.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATCCAC AGATCAGAAA TCCGATGGAG CGGATGTATC GACGCACATT CAACTACAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015005864.1 |
CDS | 187..1374 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015150378.1 |
1 | ATGAATCCAC AGATCAGAAA TCCGATGGAG CGGATGTATC GACGCACATT CAACTACAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Analysis of the N-terminal positively charged residues of the simian immunodeficiency virus Vif reveals a critical amino acid required for the antagonism of rhesus APOBEC3D, G, and H. |
In vivo hypermutation of xenotropic murine leukemia virus-related virus DNA in peripheral blood mononuclear cells of rhesus macaque by APOBEC3 proteins. |
Human and rhesus APOBEC3D, APOBEC3F, APOBEC3G, and APOBEC3H demonstrate a conserved capacity to restrict Vif-deficient HIV-1. |