LOC100049444 cDNA ORF clone, Oryzias latipes(Japanese medaka)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC100049444
Entrez Gene ID	100049444
Full Name	C-X-C chemokine receptor type 4
Synonyms	cxcr4
Gene Type	protein-coding
Organism	Oryzias latipes(Japanese medaka)

mRNA and Protein(s)

mRNA	Protein	Name
XM_004086924.3	XP_004086972.1	C-X-C chemokine receptor type 4 isoform X1
XM_023951025.1	XP_023806793.1	C-X-C chemokine receptor type 4 isoform X2

Pathways from BioSystems
Gene Ontology

The following LOC100049444 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100049444 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OJa20300	XM_004086924.3 Latest version!	Oryzias latipes C-X-C chemokine receptor type 4 (LOC100049444), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OJa113359	XM_023951025.1 Latest version!	Oryzias latipes C-X-C chemokine receptor type 4 (LOC100049444), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC100049444 ( XM_004086924.3 ) cDNA ORF clone, Oryzias latipes(Japanese medaka) -> XP_004086972.1 Oryzias latipes C-X-C chemokine receptor type 4 (LOC100049444), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OJa20300
Clone ID Related Accession (Same CDS sequence)	XM_004086924.3
Accession Version	XM_004086924.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1128bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-02-14
Organism	Oryzias latipes(Japanese medaka)
Product	C-X-C chemokine receptor type 4 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_019879.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 7, 2017 this sequence version replaced XM_004086924.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryzias latipes Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGTATT TCTATGAAAG CATCGTTTTC GACAACAGCT CTGAAGGCAT CTTGGATGGT 
TCTGGAGACT TTGAGTTTCC AGAGGAGGCA TATAAAGAAG CCCTCAGCAG AGACTTCAAG 
AAAATCTTCC TCCCCACCGT TTATGGAGTA ATATTCGTTC TTGGAATTGT GGGTAATGGA 
TTAGTGGTTG TTGTCATGGG ATACCAGAAG AAAGTGAAGA ACATGACAGA CAAGTACCGG 
CTGCATCTCT CAGTGGCTGA CCTGCTGTTA GTCCTCACTC TGCCCTTCTG GGCGGTGGAT 
GCTGTGAAAA CCTGGTACTT CGGAGGCTTC GTCTGCGTGT CGGCGCATGT GATCTACACC 
GTCAACCTGT ACAGCAGCGT GCTGATCCTG GCCTTCATCA GCCTGGACAG ATACCTGGCC 
ATCGTCCGGG CCACCAACAG CCAAGCCACC AGAAAGCTGC TGGCGAGCAG GGTGATCTAC 
GTGGGCGTGT GGCTGCCCGC CGCCTTCCTC ACTGTACCCG ACCTGGTGTT CGCCCGGGTC 
AAGAGCGTCT CATCCCCCAG CTTCAGCTTC AGGAACGACA GCGTAGAGAT GGAGGACTCC 
AGGACGATCT GTGAGCGCTT CTACCCGGTG GAGAGTCGAG TGGTGTGGAC CGTCATTTTC 
CGCTTCCAGC ACATCCTGGT GGGCTTCATC CTGCCTGGTC TTGTTATCCT CGTCTGCTAC 
TGCATCATCA TCGCCAAGCT GTCCAAAGGC ACCAAGGGCC AGACGCTGAA GAAGAGGGCT 
CTGAAGACCA CAGTCATCCT CATCCTGTGC TTCTTCTGCT GCTGGCTGCC CTACTGCATT 
GGCATCTTCC TGGACACCCT CATGATGCTG AATGTCGTCC GCACCACCTA TGAGCTGCAG 
CAGGCGTTGG ACAAGTGGAT TTCTATCACC GAGGCGCTGG CGTACTTCCA CTGCTGCCTG 
AATCCCATCC TCTACGCCTT CCTGGGAGTG AGGTTTAAGA AAACGGCGCG CAGCACATTG 
ACAATGAGCA GCAAATCCAG CCAGAAAGTG AATCTCATGA CCAAAAAGCG GGGGCAGGTT 
TCCTCTGTGT CAACTGAATC CGAGTCTTCG AGTGTTTTGT CAAGTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_004086972.1
CDS	131..1258
Translation	MEYFYESIVFDNSSEGILDGSGDFEFPEEAYKEALSRDFKKIFLPTVYGVIFVLGIVGNGLVVVVMGYQKKVKNMTDKYRLHLSVADLLLVLTLPFWAVDAVKTWYFGGFVCVSAHVIYTVNLYSSVLILAFISLDRYLAIVRATNSQATRKLLASRVIYVGVWLPAAFLTVPDLVFARVKSVSSPSFSFRNDSVEMEDSRTICERFYPVESRVVWTVIFRFQHILVGFILPGLVILVCYCIIIAKLSKGTKGQTLKKRALKTTVILILCFFCCWLPYCIGIFLDTLMMLNVVRTTYELQQALDKWISITEALAYFHCCLNPILYAFLGVRFKKTARSTLTMSSKSSQKVNLMTKKRGQVSSVSTESESSSVLSS

Target ORF information:

RefSeq Version	XM_004086924.3
Organism	Oryzias latipes(Japanese medaka)
Definition	Oryzias latipes C-X-C chemokine receptor type 4 (LOC100049444), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_004086924.3

ORF Insert Sequence:

ATGGAGTATT TCTATGAAAG CATCGTTTTC GACAACAGCT CTGAAGGCAT CTTGGATGGT 
TCTGGAGACT TTGAGTTTCC AGAGGAGGCA TATAAAGAAG CCCTCAGCAG AGACTTCAAG 
AAAATCTTCC TCCCCACCGT TTATGGAGTA ATATTCGTTC TTGGAATTGT GGGTAATGGA 
TTAGTGGTTG TTGTCATGGG ATACCAGAAG AAAGTGAAGA ACATGACAGA CAAGTACCGG 
CTGCATCTCT CAGTGGCTGA CCTGCTGTTA GTCCTCACTC TGCCCTTCTG GGCGGTGGAT 
GCTGTGAAAA CCTGGTACTT CGGAGGCTTC GTCTGCGTGT CGGCGCATGT GATCTACACC 
GTCAACCTGT ACAGCAGCGT GCTGATCCTG GCCTTCATCA GCCTGGACAG ATACCTGGCC 
ATCGTCCGGG CCACCAACAG CCAAGCCACC AGAAAGCTGC TGGCGAGCAG GGTGATCTAC 
GTGGGCGTGT GGCTGCCCGC CGCCTTCCTC ACTGTACCCG ACCTGGTGTT CGCCCGGGTC 
AAGAGCGTCT CATCCCCCAG CTTCAGCTTC AGGAACGACA GCGTAGAGAT GGAGGACTCC 
AGGACGATCT GTGAGCGCTT CTACCCGGTG GAGAGTCGAG TGGTGTGGAC CGTCATTTTC 
CGCTTCCAGC ACATCCTGGT GGGCTTCATC CTGCCTGGTC TTGTTATCCT CGTCTGCTAC 
TGCATCATCA TCGCCAAGCT GTCCAAAGGC ACCAAGGGCC AGACGCTGAA GAAGAGGGCT 
CTGAAGACCA CAGTCATCCT CATCCTGTGC TTCTTCTGCT GCTGGCTGCC CTACTGCATT 
GGCATCTTCC TGGACACCCT CATGATGCTG AATGTCGTCC GCACCACCTA TGAGCTGCAG 
CAGGCGTTGG ACAAGTGGAT TTCTATCACC GAGGCGCTGG CGTACTTCCA CTGCTGCCTG 
AATCCCATCC TCTACGCCTT CCTGGGAGTG AGGTTTAAGA AAACGGCGCG CAGCACATTG 
ACAATGAGCA GCAAATCCAG CCAGAAAGTG AATCTCATGA CCAAAAAGCG GGGGCAGGTT 
TCCTCTGTGT CAACTGAATC CGAGTCTTCG AGTGTTTTGT CAAGTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC100049444 ( XM_023951025.1 ) cDNA ORF clone, Oryzias latipes(Japanese medaka) -> XP_023806793.1 Oryzias latipes C-X-C chemokine receptor type 4 (LOC100049444), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OJa113359
Clone ID Related Accession (Same CDS sequence)	XM_023951025.1
Accession Version	XM_023951025.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 933bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-02-14
Organism	Oryzias latipes(Japanese medaka)
Product	C-X-C chemokine receptor type 4 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_019879.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryzias latipes Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGGATACC AGAAGAAAGT GAAGAACATG ACAGACAAGT ACCGGCTGCA TCTCTCAGTG 
GCTGACCTGC TGTTAGTCCT CACTCTGCCC TTCTGGGCGG TGGATGCTGT GAAAACCTGG 
TACTTCGGAG GCTTCGTCTG CGTGTCGGCG CATGTGATCT ACACCGTCAA CCTGTACAGC 
AGCGTGCTGA TCCTGGCCTT CATCAGCCTG GACAGATACC TGGCCATCGT CCGGGCCACC 
AACAGCCAAG CCACCAGAAA GCTGCTGGCG AGCAGGGTGA TCTACGTGGG CGTGTGGCTG 
CCCGCCGCCT TCCTCACTGT ACCCGACCTG GTGTTCGCCC GGGTCAAGAG CGTCTCATCC 
CCCAGCTTCA GCTTCAGGAA CGACAGCGTA GAGATGGAGG ACTCCAGGAC GATCTGTGAG 
CGCTTCTACC CGGTGGAGAG TCGAGTGGTG TGGACCGTCA TTTTCCGCTT CCAGCACATC 
CTGGTGGGCT TCATCCTGCC TGGTCTTGTT ATCCTCGTCT GCTACTGCAT CATCATCGCC 
AAGCTGTCCA AAGGCACCAA GGGCCAGACG CTGAAGAAGA GGGCTCTGAA GACCACAGTC 
ATCCTCATCC TGTGCTTCTT CTGCTGCTGG CTGCCCTACT GCATTGGCAT CTTCCTGGAC 
ACCCTCATGA TGCTGAATGT CGTCCGCACC ACCTATGAGC TGCAGCAGGC GTTGGACAAG 
TGGATTTCTA TCACCGAGGC GCTGGCGTAC TTCCACTGCT GCCTGAATCC CATCCTCTAC 
GCCTTCCTGG GAGTGAGGTT TAAGAAAACG GCGCGCAGCA CATTGACAAT GAGCAGCAAA 
TCCAGCCAGA AAGTGAATCT CATGACCAAA AAGCGGGGGC AGGTTTCCTC TGTGTCAACT 
GAATCCGAGT CTTCGAGTGT TTTGTCAAGT TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_023806793.1
CDS	282..1214
Translation	MGYQKKVKNMTDKYRLHLSVADLLLVLTLPFWAVDAVKTWYFGGFVCVSAHVIYTVNLYSSVLILAFISLDRYLAIVRATNSQATRKLLASRVIYVGVWLPAAFLTVPDLVFARVKSVSSPSFSFRNDSVEMEDSRTICERFYPVESRVVWTVIFRFQHILVGFILPGLVILVCYCIIIAKLSKGTKGQTLKKRALKTTVILILCFFCCWLPYCIGIFLDTLMMLNVVRTTYELQQALDKWISITEALAYFHCCLNPILYAFLGVRFKKTARSTLTMSSKSSQKVNLMTKKRGQVSSVSTESESSSVLSS

Target ORF information:

RefSeq Version	XM_023951025.1
Organism	Oryzias latipes(Japanese medaka)
Definition	Oryzias latipes C-X-C chemokine receptor type 4 (LOC100049444), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_023951025.1

ORF Insert Sequence:

ATGGGATACC AGAAGAAAGT GAAGAACATG ACAGACAAGT ACCGGCTGCA TCTCTCAGTG 
GCTGACCTGC TGTTAGTCCT CACTCTGCCC TTCTGGGCGG TGGATGCTGT GAAAACCTGG 
TACTTCGGAG GCTTCGTCTG CGTGTCGGCG CATGTGATCT ACACCGTCAA CCTGTACAGC 
AGCGTGCTGA TCCTGGCCTT CATCAGCCTG GACAGATACC TGGCCATCGT CCGGGCCACC 
AACAGCCAAG CCACCAGAAA GCTGCTGGCG AGCAGGGTGA TCTACGTGGG CGTGTGGCTG 
CCCGCCGCCT TCCTCACTGT ACCCGACCTG GTGTTCGCCC GGGTCAAGAG CGTCTCATCC 
CCCAGCTTCA GCTTCAGGAA CGACAGCGTA GAGATGGAGG ACTCCAGGAC GATCTGTGAG 
CGCTTCTACC CGGTGGAGAG TCGAGTGGTG TGGACCGTCA TTTTCCGCTT CCAGCACATC 
CTGGTGGGCT TCATCCTGCC TGGTCTTGTT ATCCTCGTCT GCTACTGCAT CATCATCGCC 
AAGCTGTCCA AAGGCACCAA GGGCCAGACG CTGAAGAAGA GGGCTCTGAA GACCACAGTC 
ATCCTCATCC TGTGCTTCTT CTGCTGCTGG CTGCCCTACT GCATTGGCAT CTTCCTGGAC 
ACCCTCATGA TGCTGAATGT CGTCCGCACC ACCTATGAGC TGCAGCAGGC GTTGGACAAG 
TGGATTTCTA TCACCGAGGC GCTGGCGTAC TTCCACTGCT GCCTGAATCC CATCCTCTAC 
GCCTTCCTGG GAGTGAGGTT TAAGAAAACG GCGCGCAGCA CATTGACAAT GAGCAGCAAA 
TCCAGCCAGA AAGTGAATCT CATGACCAAA AAGCGGGGGC AGGTTTCCTC TGTGTCAACT 
GAATCCGAGT CTTCGAGTGT TTTGTCAAGT TAA