ORF » Species Summary » Oryza sativa Japonica Group » LOC4326573 cDNA ORF clone

LOC4326573 cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice)

The following LOC4326573 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC4326573 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OOa01914 XM_015755617.2
Latest version!		 Oryza sativa Japonica Group polygalacturonase At1g48100 (LOC4326573), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
OOa24273 XM_015755675.2
Latest version!		 Oryza sativa Japonica Group polygalacturonase At1g48100 (LOC4326573), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
View Old Accession Versions >>
OOa24273 XM_015755675.1 Oryza sativa Japonica Group polygalacturonase At1g48100 (LOC4326573), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
OOa01914 XM_015755617.1 Oryza sativa Japonica Group polygalacturonase At1g48100 (LOC4326573), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC4326573 ( XM_015755617.2 ) cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice) -> XP_015611103.1 Oryza sativa Japonica Group polygalacturonase At1g48100 (LOC4326573), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OOa01914
    Clone ID Related Accession (Same CDS sequence) XM_015755617.2 , XM_015755617.1
    Accession Version XM_015755617.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1617bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-08-06
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product polygalacturonase At1g48100 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029256.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015755617.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGAAGCTCA GAGTAAAAGG CCTCGGCCTC CTTCTTCTCC TTGTCTTGCT TGCTCTTTGC 
    TCCACCATCG ACGTCTGCGA TGCAAGAAGA GGCAAGCATT GGCGACCTAG GAGCTCACCG 
    AGCTCCTCTC TGCTAAGGAA CAAGGGCAAA GGAAAGAAGG GCAGCTCCAA CCGGCAGCAT 
    GGAAGCAACC GGCCGAGCCC GAAGCCGCCA CTCAGCCCGC CACCGAGTCC TGGTAATGGC 
    AAAGGATACC AGAGCCCATA CCAGCCAAGC CCAAGTCCAA GCCCGAATGC ACCTGTAAGC 
    CCAAGCCCTG TCAATGGGAG TGGACATGCA AGTCCCAAGT CTCCAACTCC AAGCTGTGGA 
    AAAGGTAATC AGCCACCATC GCGGCCAACA CCAACATCAC CACAGGGCGC AGTGTTTAAC 
    GTGGTTGATT TTGGAGCCAA AGGCGATGGC GTCTCCGATG ATACCAAGGC CTTTGAAGCA 
    GCATGGGCTG CAGCGTGCAA GCAGGGAGCA TCTACAGTTG TCGTACCATC AGAACTTGAG 
    TTTCTTGTTG GGCCAATCTC ATTCTCTGGG CCTTACTGCA AACCAAATAT TCTGTTCCAG 
    CTGGATGGAA CAATTGTAGC CCCAACCAGT GCTAAAGCTT GGGGTTCTGG TTTGCTTCAA 
    TGGATTGAGT TTACCAAACT AAATGGAGTA TCAATTCAAG GCAATGGCAT CATAAATGGT 
    AGAGGACAAC AATGGTGGAC CTATTCAGAC ATAGATGACG ACGAAGATGA TGACACACAG 
    TACGATGTGG AGTTTGAAAG GATGCCACAA GTTAAACCTA CAGCATTGAG ATTCTATGGT 
    AGTTTCAACG TTGTAGTAGC TGGTATCACT ATTGTCAACA GCTCGCAGTG CCATCTCAAG 
    TTTGACAGCT GTCAAGGAGT GATGGTCCAT GACGTAACAA TATCCTCCCC AGAAAACAGC 
    CTCAACACTG ATGGAATACA CCTGCAGAAC TCTAAAGATG TCAGCATTCA TCATACCAAC 
    CTGGCTTGTG GTGATGACTG CGTCTCCATT CAAACAGGAT GCAGCAATAT AAATATACAC 
    AATGTGAATT GTGGACCTGG CCATGGAATC AGCATTGGAG GCCTAGGCCG GGACAACACA 
    AAAGCATGTG TCTCCAATGT TACTGTAAGA GATGTCAACA TGTTCAGAAC CATGACTGGT 
    GTCAGAATCA AGACCTGGCA GGGTGGCTTA GGCTTGGTTC AAGATGTACG GTTCTCGAAC 
    ATCCAAGTCT CAGAAGTCCA AACACCAATC ATCATAGACC AGTTTTACTG TGACAAAAGA 
    ACATGCTCAA ATCAAACATC AGCAGTGGCA GTATCAGGCG TTCAGTATGA GAACATCAGA 
    GGAACATTTA CTATCAAGCC TGTTCATTTT GCATGCAGTG ACAGCTCACC TTGTTCAGGG 
    ATAACTCTTA CTGGAGTACA ACTCAGGCCT GTCCAAATAC CCCACTACCG CCTAAACGAC 
    CCTTTCTGCT GGCAAGCTTT TGGGGAGCTC TACACTCCAA CAGTCCCTCC AATTGCTTGC 
    TTGCACCTTG GAAAACCTGC TGGGAACAAC TTACAGTCAT ACCACGACTT ATGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015611103.1
    CDS262..1878
    Translation

    Target ORF information:

    RefSeq Version XM_015755617.2
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group polygalacturonase At1g48100 (LOC4326573), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_015755617.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGAAGCTCA GAGTAAAAGG CCTCGGCCTC CTTCTTCTCC TTGTCTTGCT TGCTCTTTGC 
    TCCACCATCG ACGTCTGCGA TGCAAGAAGA GGCAAGCATT GGCGACCTAG GAGCTCACCG 
    AGCTCCTCTC TGCTAAGGAA CAAGGGCAAA GGAAAGAAGG GCAGCTCCAA CCGGCAGCAT 
    GGAAGCAACC GGCCGAGCCC GAAGCCGCCA CTCAGCCCGC CACCGAGTCC TGGTAATGGC 
    AAAGGATACC AGAGCCCATA CCAGCCAAGC CCAAGTCCAA GCCCGAATGC ACCTGTAAGC 
    CCAAGCCCTG TCAATGGGAG TGGACATGCA AGTCCCAAGT CTCCAACTCC AAGCTGTGGA 
    AAAGGTAATC AGCCACCATC GCGGCCAACA CCAACATCAC CACAGGGCGC AGTGTTTAAC 
    GTGGTTGATT TTGGAGCCAA AGGCGATGGC GTCTCCGATG ATACCAAGGC CTTTGAAGCA 
    GCATGGGCTG CAGCGTGCAA GCAGGGAGCA TCTACAGTTG TCGTACCATC AGAACTTGAG 
    TTTCTTGTTG GGCCAATCTC ATTCTCTGGG CCTTACTGCA AACCAAATAT TCTGTTCCAG 
    CTGGATGGAA CAATTGTAGC CCCAACCAGT GCTAAAGCTT GGGGTTCTGG TTTGCTTCAA 
    TGGATTGAGT TTACCAAACT AAATGGAGTA TCAATTCAAG GCAATGGCAT CATAAATGGT 
    AGAGGACAAC AATGGTGGAC CTATTCAGAC ATAGATGACG ACGAAGATGA TGACACACAG 
    TACGATGTGG AGTTTGAAAG GATGCCACAA GTTAAACCTA CAGCATTGAG ATTCTATGGT 
    AGTTTCAACG TTGTAGTAGC TGGTATCACT ATTGTCAACA GCTCGCAGTG CCATCTCAAG 
    TTTGACAGCT GTCAAGGAGT GATGGTCCAT GACGTAACAA TATCCTCCCC AGAAAACAGC 
    CTCAACACTG ATGGAATACA CCTGCAGAAC TCTAAAGATG TCAGCATTCA TCATACCAAC 
    CTGGCTTGTG GTGATGACTG CGTCTCCATT CAAACAGGAT GCAGCAATAT AAATATACAC 
    AATGTGAATT GTGGACCTGG CCATGGAATC AGCATTGGAG GCCTAGGCCG GGACAACACA 
    AAAGCATGTG TCTCCAATGT TACTGTAAGA GATGTCAACA TGTTCAGAAC CATGACTGGT 
    GTCAGAATCA AGACCTGGCA GGGTGGCTTA GGCTTGGTTC AAGATGTACG GTTCTCGAAC 
    ATCCAAGTCT CAGAAGTCCA AACACCAATC ATCATAGACC AGTTTTACTG TGACAAAAGA 
    ACATGCTCAA ATCAAACATC AGCAGTGGCA GTATCAGGCG TTCAGTATGA GAACATCAGA 
    GGAACATTTA CTATCAAGCC TGTTCATTTT GCATGCAGTG ACAGCTCACC TTGTTCAGGG 
    ATAACTCTTA CTGGAGTACA ACTCAGGCCT GTCCAAATAC CCCACTACCG CCTAAACGAC 
    CCTTTCTGCT GGCAAGCTTT TGGGGAGCTC TACACTCCAA CAGTCCCTCC AATTGCTTGC 
    TTGCACCTTG GAAAACCTGC TGGGAACAAC TTACAGTCAT ACCACGACTT ATGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC4326573 ( XM_015755617.1 ) cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice) -> XP_015611103.1 Oryza sativa Japonica Group polygalacturonase At1g48100 (LOC4326573), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OOa01914
    Clone ID Related Accession (Same CDS sequence) XM_015755617.2 , XM_015755617.1
    Accession Version XM_015755617.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1617bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-02-29
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product polygalacturonase At1g48100 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379174.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGAAGCTCA GAGTAAAAGG CCTCGGCCTC CTTCTTCTCC TTGTCTTGCT TGCTCTTTGC 
    TCCACCATCG ACGTCTGCGA TGCAAGAAGA GGCAAGCATT GGCGACCTAG GAGCTCACCG 
    AGCTCCTCTC TGCTAAGGAA CAAGGGCAAA GGAAAGAAGG GCAGCTCCAA CCGGCAGCAT 
    GGAAGCAACC GGCCGAGCCC GAAGCCGCCA CTCAGCCCGC CACCGAGTCC TGGTAATGGC 
    AAAGGATACC AGAGCCCATA CCAGCCAAGC CCAAGTCCAA GCCCGAATGC ACCTGTAAGC 
    CCAAGCCCTG TCAATGGGAG TGGACATGCA AGTCCCAAGT CTCCAACTCC AAGCTGTGGA 
    AAAGGTAATC AGCCACCATC GCGGCCAACA CCAACATCAC CACAGGGCGC AGTGTTTAAC 
    GTGGTTGATT TTGGAGCCAA AGGCGATGGC GTCTCCGATG ATACCAAGGC CTTTGAAGCA 
    GCATGGGCTG CAGCGTGCAA GCAGGGAGCA TCTACAGTTG TCGTACCATC AGAACTTGAG 
    TTTCTTGTTG GGCCAATCTC ATTCTCTGGG CCTTACTGCA AACCAAATAT TCTGTTCCAG 
    CTGGATGGAA CAATTGTAGC CCCAACCAGT GCTAAAGCTT GGGGTTCTGG TTTGCTTCAA 
    TGGATTGAGT TTACCAAACT AAATGGAGTA TCAATTCAAG GCAATGGCAT CATAAATGGT 
    AGAGGACAAC AATGGTGGAC CTATTCAGAC ATAGATGACG ACGAAGATGA TGACACACAG 
    TACGATGTGG AGTTTGAAAG GATGCCACAA GTTAAACCTA CAGCATTGAG ATTCTATGGT 
    AGTTTCAACG TTGTAGTAGC TGGTATCACT ATTGTCAACA GCTCGCAGTG CCATCTCAAG 
    TTTGACAGCT GTCAAGGAGT GATGGTCCAT GACGTAACAA TATCCTCCCC AGAAAACAGC 
    CTCAACACTG ATGGAATACA CCTGCAGAAC TCTAAAGATG TCAGCATTCA TCATACCAAC 
    CTGGCTTGTG GTGATGACTG CGTCTCCATT CAAACAGGAT GCAGCAATAT AAATATACAC 
    AATGTGAATT GTGGACCTGG CCATGGAATC AGCATTGGAG GCCTAGGCCG GGACAACACA 
    AAAGCATGTG TCTCCAATGT TACTGTAAGA GATGTCAACA TGTTCAGAAC CATGACTGGT 
    GTCAGAATCA AGACCTGGCA GGGTGGCTTA GGCTTGGTTC AAGATGTACG GTTCTCGAAC 
    ATCCAAGTCT CAGAAGTCCA AACACCAATC ATCATAGACC AGTTTTACTG TGACAAAAGA 
    ACATGCTCAA ATCAAACATC AGCAGTGGCA GTATCAGGCG TTCAGTATGA GAACATCAGA 
    GGAACATTTA CTATCAAGCC TGTTCATTTT GCATGCAGTG ACAGCTCACC TTGTTCAGGG 
    ATAACTCTTA CTGGAGTACA ACTCAGGCCT GTCCAAATAC CCCACTACCG CCTAAACGAC 
    CCTTTCTGCT GGCAAGCTTT TGGGGAGCTC TACACTCCAA CAGTCCCTCC AATTGCTTGC 
    TTGCACCTTG GAAAACCTGC TGGGAACAAC TTACAGTCAT ACCACGACTT ATGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015611103.1
    CDS79..1695
    Translation

    Target ORF information:

    RefSeq Version XM_015755617.1
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group polygalacturonase At1g48100 (LOC4326573), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_015755617.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGAAGCTCA GAGTAAAAGG CCTCGGCCTC CTTCTTCTCC TTGTCTTGCT TGCTCTTTGC 
    TCCACCATCG ACGTCTGCGA TGCAAGAAGA GGCAAGCATT GGCGACCTAG GAGCTCACCG 
    AGCTCCTCTC TGCTAAGGAA CAAGGGCAAA GGAAAGAAGG GCAGCTCCAA CCGGCAGCAT 
    GGAAGCAACC GGCCGAGCCC GAAGCCGCCA CTCAGCCCGC CACCGAGTCC TGGTAATGGC 
    AAAGGATACC AGAGCCCATA CCAGCCAAGC CCAAGTCCAA GCCCGAATGC ACCTGTAAGC 
    CCAAGCCCTG TCAATGGGAG TGGACATGCA AGTCCCAAGT CTCCAACTCC AAGCTGTGGA 
    AAAGGTAATC AGCCACCATC GCGGCCAACA CCAACATCAC CACAGGGCGC AGTGTTTAAC 
    GTGGTTGATT TTGGAGCCAA AGGCGATGGC GTCTCCGATG ATACCAAGGC CTTTGAAGCA 
    GCATGGGCTG CAGCGTGCAA GCAGGGAGCA TCTACAGTTG TCGTACCATC AGAACTTGAG 
    TTTCTTGTTG GGCCAATCTC ATTCTCTGGG CCTTACTGCA AACCAAATAT TCTGTTCCAG 
    CTGGATGGAA CAATTGTAGC CCCAACCAGT GCTAAAGCTT GGGGTTCTGG TTTGCTTCAA 
    TGGATTGAGT TTACCAAACT AAATGGAGTA TCAATTCAAG GCAATGGCAT CATAAATGGT 
    AGAGGACAAC AATGGTGGAC CTATTCAGAC ATAGATGACG ACGAAGATGA TGACACACAG 
    TACGATGTGG AGTTTGAAAG GATGCCACAA GTTAAACCTA CAGCATTGAG ATTCTATGGT 
    AGTTTCAACG TTGTAGTAGC TGGTATCACT ATTGTCAACA GCTCGCAGTG CCATCTCAAG 
    TTTGACAGCT GTCAAGGAGT GATGGTCCAT GACGTAACAA TATCCTCCCC AGAAAACAGC 
    CTCAACACTG ATGGAATACA CCTGCAGAAC TCTAAAGATG TCAGCATTCA TCATACCAAC 
    CTGGCTTGTG GTGATGACTG CGTCTCCATT CAAACAGGAT GCAGCAATAT AAATATACAC 
    AATGTGAATT GTGGACCTGG CCATGGAATC AGCATTGGAG GCCTAGGCCG GGACAACACA 
    AAAGCATGTG TCTCCAATGT TACTGTAAGA GATGTCAACA TGTTCAGAAC CATGACTGGT 
    GTCAGAATCA AGACCTGGCA GGGTGGCTTA GGCTTGGTTC AAGATGTACG GTTCTCGAAC 
    ATCCAAGTCT CAGAAGTCCA AACACCAATC ATCATAGACC AGTTTTACTG TGACAAAAGA 
    ACATGCTCAA ATCAAACATC AGCAGTGGCA GTATCAGGCG TTCAGTATGA GAACATCAGA 
    GGAACATTTA CTATCAAGCC TGTTCATTTT GCATGCAGTG ACAGCTCACC TTGTTCAGGG 
    ATAACTCTTA CTGGAGTACA ACTCAGGCCT GTCCAAATAC CCCACTACCG CCTAAACGAC 
    CCTTTCTGCT GGCAAGCTTT TGGGGAGCTC TACACTCCAA CAGTCCCTCC AATTGCTTGC 
    TTGCACCTTG GAAAACCTGC TGGGAACAAC TTACAGTCAT ACCACGACTT ATGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC4326573 ( XM_015755675.2 ) cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice) -> XP_015611161.1 Oryza sativa Japonica Group polygalacturonase At1g48100 (LOC4326573), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OOa24273
    Clone ID Related Accession (Same CDS sequence) XM_015755675.2 , XM_015755675.1
    Accession Version XM_015755675.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1614bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-08-06
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product polygalacturonase At1g48100 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029256.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015755675.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGAAGCTCA GAGTAAAAGG CCTCGGCCTC CTTCTTCTCC TTGTCTTGCT TGCTCTTTGC 
    TCCACCATCG ACGTCTGCGA TGCAAGAAGA GGCAAGCATT GGCGACCTAG GAGCTCACCG 
    AGCTCCTCTC TGCTAAGGAA CAAGGGCAAA GGAAAGAAGG GCAGCTCCAA CCGGCAGCAT 
    GGAAGCAACC GGCCGAGCCC GAAGCCGCCA CTCAGCCCGC CACCGAGTCC TGGTAATGGC 
    AAAGGATACC AGAGCCCATA CCAGCCAAGC CCAAGTCCAA GCCCGAATGC ACCTGTAAGC 
    CCAAGCCCTG TCAATGGGAG TGGACATGCA AGTCCCAAGT CTCCAACTCC AAGCTGTGGA 
    AAAGGTAATC AGCCACCATC GCGGCCAACA CCAACATCAC CACAGGGCGC AGTGTTTAAC 
    GTGGTTGATT TTGGAGCCAA AGGCGATGGC GTCTCCGATG ATACCAAGGC CTTTGAAGCA 
    GCATGGGCTG CAGCGTGCAA GCAGGGAGCA TCTACAGTTG TCGTACCATC AGAACTTGAG 
    TTTCTTGTTG GGCCAATCTC ATTCTCTGGG CCTTACTGCA AACCAAATAT TCTGTTCCAG 
    CTGGATGGAA CAATTGTAGC CCCAACCAGT GCTAAAGCTT GGGGTTCTGG TTTGCTTCAA 
    TGGATTGAGT TTACCAAACT AAATGGAGTA TCAATTCAAG GCAATGGCAT CATAAATGGT 
    AGAGGACAAC AATGGTGGAC CTATTCAGAC ATAGATGACG ACGAAGATGA TGACACATAC 
    GATGTGGAGT TTGAAAGGAT GCCACAAGTT AAACCTACAG CATTGAGATT CTATGGTAGT 
    TTCAACGTTG TAGTAGCTGG TATCACTATT GTCAACAGCT CGCAGTGCCA TCTCAAGTTT 
    GACAGCTGTC AAGGAGTGAT GGTCCATGAC GTAACAATAT CCTCCCCAGA AAACAGCCTC 
    AACACTGATG GAATACACCT GCAGAACTCT AAAGATGTCA GCATTCATCA TACCAACCTG 
    GCTTGTGGTG ATGACTGCGT CTCCATTCAA ACAGGATGCA GCAATATAAA TATACACAAT 
    GTGAATTGTG GACCTGGCCA TGGAATCAGC ATTGGAGGCC TAGGCCGGGA CAACACAAAA 
    GCATGTGTCT CCAATGTTAC TGTAAGAGAT GTCAACATGT TCAGAACCAT GACTGGTGTC 
    AGAATCAAGA CCTGGCAGGG TGGCTTAGGC TTGGTTCAAG ATGTACGGTT CTCGAACATC 
    CAAGTCTCAG AAGTCCAAAC ACCAATCATC ATAGACCAGT TTTACTGTGA CAAAAGAACA 
    TGCTCAAATC AAACATCAGC AGTGGCAGTA TCAGGCGTTC AGTATGAGAA CATCAGAGGA 
    ACATTTACTA TCAAGCCTGT TCATTTTGCA TGCAGTGACA GCTCACCTTG TTCAGGGATA 
    ACTCTTACTG GAGTACAACT CAGGCCTGTC CAAATACCCC ACTACCGCCT AAACGACCCT 
    TTCTGCTGGC AAGCTTTTGG GGAGCTCTAC ACTCCAACAG TCCCTCCAAT TGCTTGCTTG 
    CACCTTGGAA AACCTGCTGG GAACAACTTA CAGTCATACC ACGACTTATG TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015611161.1
    CDS263..1876
    Translation

    Target ORF information:

    RefSeq Version XM_015755675.2
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group polygalacturonase At1g48100 (LOC4326573), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_015755675.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGAAGCTCA GAGTAAAAGG CCTCGGCCTC CTTCTTCTCC TTGTCTTGCT TGCTCTTTGC 
    TCCACCATCG ACGTCTGCGA TGCAAGAAGA GGCAAGCATT GGCGACCTAG GAGCTCACCG 
    AGCTCCTCTC TGCTAAGGAA CAAGGGCAAA GGAAAGAAGG GCAGCTCCAA CCGGCAGCAT 
    GGAAGCAACC GGCCGAGCCC GAAGCCGCCA CTCAGCCCGC CACCGAGTCC TGGTAATGGC 
    AAAGGATACC AGAGCCCATA CCAGCCAAGC CCAAGTCCAA GCCCGAATGC ACCTGTAAGC 
    CCAAGCCCTG TCAATGGGAG TGGACATGCA AGTCCCAAGT CTCCAACTCC AAGCTGTGGA 
    AAAGGTAATC AGCCACCATC GCGGCCAACA CCAACATCAC CACAGGGCGC AGTGTTTAAC 
    GTGGTTGATT TTGGAGCCAA AGGCGATGGC GTCTCCGATG ATACCAAGGC CTTTGAAGCA 
    GCATGGGCTG CAGCGTGCAA GCAGGGAGCA TCTACAGTTG TCGTACCATC AGAACTTGAG 
    TTTCTTGTTG GGCCAATCTC ATTCTCTGGG CCTTACTGCA AACCAAATAT TCTGTTCCAG 
    CTGGATGGAA CAATTGTAGC CCCAACCAGT GCTAAAGCTT GGGGTTCTGG TTTGCTTCAA 
    TGGATTGAGT TTACCAAACT AAATGGAGTA TCAATTCAAG GCAATGGCAT CATAAATGGT 
    AGAGGACAAC AATGGTGGAC CTATTCAGAC ATAGATGACG ACGAAGATGA TGACACATAC 
    GATGTGGAGT TTGAAAGGAT GCCACAAGTT AAACCTACAG CATTGAGATT CTATGGTAGT 
    TTCAACGTTG TAGTAGCTGG TATCACTATT GTCAACAGCT CGCAGTGCCA TCTCAAGTTT 
    GACAGCTGTC AAGGAGTGAT GGTCCATGAC GTAACAATAT CCTCCCCAGA AAACAGCCTC 
    AACACTGATG GAATACACCT GCAGAACTCT AAAGATGTCA GCATTCATCA TACCAACCTG 
    GCTTGTGGTG ATGACTGCGT CTCCATTCAA ACAGGATGCA GCAATATAAA TATACACAAT 
    GTGAATTGTG GACCTGGCCA TGGAATCAGC ATTGGAGGCC TAGGCCGGGA CAACACAAAA 
    GCATGTGTCT CCAATGTTAC TGTAAGAGAT GTCAACATGT TCAGAACCAT GACTGGTGTC 
    AGAATCAAGA CCTGGCAGGG TGGCTTAGGC TTGGTTCAAG ATGTACGGTT CTCGAACATC 
    CAAGTCTCAG AAGTCCAAAC ACCAATCATC ATAGACCAGT TTTACTGTGA CAAAAGAACA 
    TGCTCAAATC AAACATCAGC AGTGGCAGTA TCAGGCGTTC AGTATGAGAA CATCAGAGGA 
    ACATTTACTA TCAAGCCTGT TCATTTTGCA TGCAGTGACA GCTCACCTTG TTCAGGGATA 
    ACTCTTACTG GAGTACAACT CAGGCCTGTC CAAATACCCC ACTACCGCCT AAACGACCCT 
    TTCTGCTGGC AAGCTTTTGG GGAGCTCTAC ACTCCAACAG TCCCTCCAAT TGCTTGCTTG 
    CACCTTGGAA AACCTGCTGG GAACAACTTA CAGTCATACC ACGACTTATG TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC4326573 ( XM_015755675.1 ) cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice) -> XP_015611161.1 Oryza sativa Japonica Group polygalacturonase At1g48100 (LOC4326573), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OOa24273
    Clone ID Related Accession (Same CDS sequence) XM_015755675.2 , XM_015755675.1
    Accession Version XM_015755675.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1614bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-02-29
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product polygalacturonase At1g48100 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379174.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGAAGCTCA GAGTAAAAGG CCTCGGCCTC CTTCTTCTCC TTGTCTTGCT TGCTCTTTGC 
    TCCACCATCG ACGTCTGCGA TGCAAGAAGA GGCAAGCATT GGCGACCTAG GAGCTCACCG 
    AGCTCCTCTC TGCTAAGGAA CAAGGGCAAA GGAAAGAAGG GCAGCTCCAA CCGGCAGCAT 
    GGAAGCAACC GGCCGAGCCC GAAGCCGCCA CTCAGCCCGC CACCGAGTCC TGGTAATGGC 
    AAAGGATACC AGAGCCCATA CCAGCCAAGC CCAAGTCCAA GCCCGAATGC ACCTGTAAGC 
    CCAAGCCCTG TCAATGGGAG TGGACATGCA AGTCCCAAGT CTCCAACTCC AAGCTGTGGA 
    AAAGGTAATC AGCCACCATC GCGGCCAACA CCAACATCAC CACAGGGCGC AGTGTTTAAC 
    GTGGTTGATT TTGGAGCCAA AGGCGATGGC GTCTCCGATG ATACCAAGGC CTTTGAAGCA 
    GCATGGGCTG CAGCGTGCAA GCAGGGAGCA TCTACAGTTG TCGTACCATC AGAACTTGAG 
    TTTCTTGTTG GGCCAATCTC ATTCTCTGGG CCTTACTGCA AACCAAATAT TCTGTTCCAG 
    CTGGATGGAA CAATTGTAGC CCCAACCAGT GCTAAAGCTT GGGGTTCTGG TTTGCTTCAA 
    TGGATTGAGT TTACCAAACT AAATGGAGTA TCAATTCAAG GCAATGGCAT CATAAATGGT 
    AGAGGACAAC AATGGTGGAC CTATTCAGAC ATAGATGACG ACGAAGATGA TGACACATAC 
    GATGTGGAGT TTGAAAGGAT GCCACAAGTT AAACCTACAG CATTGAGATT CTATGGTAGT 
    TTCAACGTTG TAGTAGCTGG TATCACTATT GTCAACAGCT CGCAGTGCCA TCTCAAGTTT 
    GACAGCTGTC AAGGAGTGAT GGTCCATGAC GTAACAATAT CCTCCCCAGA AAACAGCCTC 
    AACACTGATG GAATACACCT GCAGAACTCT AAAGATGTCA GCATTCATCA TACCAACCTG 
    GCTTGTGGTG ATGACTGCGT CTCCATTCAA ACAGGATGCA GCAATATAAA TATACACAAT 
    GTGAATTGTG GACCTGGCCA TGGAATCAGC ATTGGAGGCC TAGGCCGGGA CAACACAAAA 
    GCATGTGTCT CCAATGTTAC TGTAAGAGAT GTCAACATGT TCAGAACCAT GACTGGTGTC 
    AGAATCAAGA CCTGGCAGGG TGGCTTAGGC TTGGTTCAAG ATGTACGGTT CTCGAACATC 
    CAAGTCTCAG AAGTCCAAAC ACCAATCATC ATAGACCAGT TTTACTGTGA CAAAAGAACA 
    TGCTCAAATC AAACATCAGC AGTGGCAGTA TCAGGCGTTC AGTATGAGAA CATCAGAGGA 
    ACATTTACTA TCAAGCCTGT TCATTTTGCA TGCAGTGACA GCTCACCTTG TTCAGGGATA 
    ACTCTTACTG GAGTACAACT CAGGCCTGTC CAAATACCCC ACTACCGCCT AAACGACCCT 
    TTCTGCTGGC AAGCTTTTGG GGAGCTCTAC ACTCCAACAG TCCCTCCAAT TGCTTGCTTG 
    CACCTTGGAA AACCTGCTGG GAACAACTTA CAGTCATACC ACGACTTATG TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015611161.1
    CDS458..2071
    Translation

    Target ORF information:

    RefSeq Version XM_015755675.1
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group polygalacturonase At1g48100 (LOC4326573), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_015755675.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGAAGCTCA GAGTAAAAGG CCTCGGCCTC CTTCTTCTCC TTGTCTTGCT TGCTCTTTGC 
    TCCACCATCG ACGTCTGCGA TGCAAGAAGA GGCAAGCATT GGCGACCTAG GAGCTCACCG 
    AGCTCCTCTC TGCTAAGGAA CAAGGGCAAA GGAAAGAAGG GCAGCTCCAA CCGGCAGCAT 
    GGAAGCAACC GGCCGAGCCC GAAGCCGCCA CTCAGCCCGC CACCGAGTCC TGGTAATGGC 
    AAAGGATACC AGAGCCCATA CCAGCCAAGC CCAAGTCCAA GCCCGAATGC ACCTGTAAGC 
    CCAAGCCCTG TCAATGGGAG TGGACATGCA AGTCCCAAGT CTCCAACTCC AAGCTGTGGA 
    AAAGGTAATC AGCCACCATC GCGGCCAACA CCAACATCAC CACAGGGCGC AGTGTTTAAC 
    GTGGTTGATT TTGGAGCCAA AGGCGATGGC GTCTCCGATG ATACCAAGGC CTTTGAAGCA 
    GCATGGGCTG CAGCGTGCAA GCAGGGAGCA TCTACAGTTG TCGTACCATC AGAACTTGAG 
    TTTCTTGTTG GGCCAATCTC ATTCTCTGGG CCTTACTGCA AACCAAATAT TCTGTTCCAG 
    CTGGATGGAA CAATTGTAGC CCCAACCAGT GCTAAAGCTT GGGGTTCTGG TTTGCTTCAA 
    TGGATTGAGT TTACCAAACT AAATGGAGTA TCAATTCAAG GCAATGGCAT CATAAATGGT 
    AGAGGACAAC AATGGTGGAC CTATTCAGAC ATAGATGACG ACGAAGATGA TGACACATAC 
    GATGTGGAGT TTGAAAGGAT GCCACAAGTT AAACCTACAG CATTGAGATT CTATGGTAGT 
    TTCAACGTTG TAGTAGCTGG TATCACTATT GTCAACAGCT CGCAGTGCCA TCTCAAGTTT 
    GACAGCTGTC AAGGAGTGAT GGTCCATGAC GTAACAATAT CCTCCCCAGA AAACAGCCTC 
    AACACTGATG GAATACACCT GCAGAACTCT AAAGATGTCA GCATTCATCA TACCAACCTG 
    GCTTGTGGTG ATGACTGCGT CTCCATTCAA ACAGGATGCA GCAATATAAA TATACACAAT 
    GTGAATTGTG GACCTGGCCA TGGAATCAGC ATTGGAGGCC TAGGCCGGGA CAACACAAAA 
    GCATGTGTCT CCAATGTTAC TGTAAGAGAT GTCAACATGT TCAGAACCAT GACTGGTGTC 
    AGAATCAAGA CCTGGCAGGG TGGCTTAGGC TTGGTTCAAG ATGTACGGTT CTCGAACATC 
    CAAGTCTCAG AAGTCCAAAC ACCAATCATC ATAGACCAGT TTTACTGTGA CAAAAGAACA 
    TGCTCAAATC AAACATCAGC AGTGGCAGTA TCAGGCGTTC AGTATGAGAA CATCAGAGGA 
    ACATTTACTA TCAAGCCTGT TCATTTTGCA TGCAGTGACA GCTCACCTTG TTCAGGGATA 
    ACTCTTACTG GAGTACAACT CAGGCCTGTC CAAATACCCC ACTACCGCCT AAACGACCCT 
    TTCTGCTGGC AAGCTTTTGG GGAGCTCTAC ACTCCAACAG TCCCTCCAAT TGCTTGCTTG 
    CACCTTGGAA AACCTGCTGG GAACAACTTA CAGTCATACC ACGACTTATG TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

見積依頼

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