Patl1 cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Patl1
Entrez Gene ID	225929
Full Name	protein associated with topoisomerase II homolog 1 (yeast)
Synonyms	AV312086,Pat1b
General protein information	Preferred Names protein associated with topoisomerase II homolog 1 (yeast) Names protein PAT1 homolog 1 PAT1-like protein 1 protein PAT1 homolog b
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 19 Map Location: 19\|19 A

mRNA and Protein(s)

mRNA	Protein	Name
NM_172635.3	NP_766223.2	protein PAT1 homolog 1
XM_030250884.1	XP_030106744.1	protein PAT1 homolog 1 isoform X1
XM_006526947.2	XP_006527010.1	protein PAT1 homolog 1 isoform X1

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	PATL1	XP_003313081.1
Homo sapiens (human)	PATL1	NP_689929.2
Canis lupus familiaris (dog)	PATL1	XP_852101.1
Bos taurus (cattle)	PATL1	NP_001180136.1
Xenopus tropicalis (tropical clawed frog)	patl1	NP_001096293.1
	PATL1	XP_001089844.1
Mus musculus (house mouse)	Patl1	NP_766223.2
Rattus norvegicus (Norway rat)	Patl1	NP_001101990.1
Gallus gallus (chicken)	OSBP	XP_424206.4
Danio rerio (zebrafish)	patl1	NP_001076497.1

Gene Ontology
Bibliography

Related articles in PubMed

High-throughput discovery of novel developmental phenotypes.
Dickinson ME, Flenniken AM, Ji X, Teboul L, Wong MD, White JK, Meehan TF, Weninger WJ, Westerberg H, Adissu H, Baker CN, Bower L, Brown JM, Caddle LB, Chiani F, Clary D, Cleak J, Daly MJ, Denegre JM, Doe B, Dolan ME, Edie SM, Fuchs H, Gailus-Durner V, Galli A, Gambadoro A, Gallegos J, Guo S, Horner NR, Hsu CW, Johnson SJ, Kalaga S, Keith LC, Lanoue L, Lawson TN, Lek M, Mark M, Marschall S, Mason J, McElwee ML, Newbigging S, Nutter LM, Peterson KA, Ramirez-Solis R, Rowland DJ, Ryder E, Samocha KE, Seavitt JR, Selloum M, Szoke-Kovacs Z, Tamura M, Trainor AG, Tudose I, Wakana S, Warren J, Wendling O, West DB, Wong L, Yoshiki A, , , , , , , , , MacArthur DG, Tocchini-Valentini GP, Gao X, Flicek P, Bradley A, Skarnes WC, Justice MJ, Parkinson HE, Moore M, Wells S, Braun RE, Svenson KL, de Angelis MH, Herault Y, Mohun T, Mallon AM, Henkelman RM, Brown SD, Adams DJ, Lloyd KC, McKerlie C, Beaudet AL, Bu?an M, Murray SA
Nature537(7621)508-514(2016 09)

The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Koscielny G, Yaikhom G, Iyer V, Meehan TF, Morgan H, Atienza-Herrero J, Blake A, Chen CK, Easty R, Di Fenza A, Fiegel T, Grifiths M, Horne A, Karp NA, Kurbatova N, Mason JC, Matthews P, Oakley DJ, Qazi A, Regnart J, Retha A, Santos LA, Sneddon DJ, Warren J, Westerberg H, Wilson RJ, Melvin DG, Smedley D, Brown SD, Flicek P, Skarnes WC, Mallon AM, Parkinson H
Nucleic acids research42(Database issue)D802-9(2014 Jan)

Distinct functions of maternal and somatic Pat1 protein paralogs.
Marnef A, Maldonado M, Bugaut A, Balasubramanian S, Kress M, Weil D, Standart N
RNA (New York, N.Y.)16(11)2094-107(2010 Nov)

Identification and developmental analysis of genes expressed by dopaminergic neurons of the substantia nigra pars compacta.
Thuret S, Bhatt L, O'Leary DD, Simon HH
Molecular and cellular neurosciences25(3)394-405(2004 Mar)

BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC, Babbitt PC, Ferrin TE
Nucleic acids research31(1)278-81(2003 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Patl1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Patl1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OMu55441	XM_006526947.2 Latest version!	Mus musculus protein associated with topoisomerase II homolog 1 (yeast) (Patl1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$307.30 $439.00
OMu03809	NM_172635.3 Latest version!	Mus musculus protein associated with topoisomerase II homolog 1 (yeast) (Patl1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$454.30 $649.00
OMu55441	XM_030250884.1 Latest version!	Mus musculus protein associated with topoisomerase II homolog 1 (yeast) (Patl1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Patl1 ( XM_006526947.2 ) cDNA ORF clone, Mus musculus(house mouse) -> XP_006527010.1 Mus musculus protein associated with topoisomerase II homolog 1 (yeast) (Patl1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OMu55441
Clone ID Related Accession (Same CDS sequence)	XM_030250884.1 , XM_006526947.2
Accession Version	XM_006526947.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1656bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-21
Organism	Mus musculus(house mouse)
Product	protein PAT1 homolog 1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000085.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006526947.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCGCCAC GCTATCCTGC TCCCTATGGC GAGAGGATAT CTCCAAACCA GCTCTGCAGT 
GTCCCGAACT CCTCCCTCCT GGGCCACCCT TTTCCTCCTA ATGTTCCTCC TGTACTTAGT 
CCCCTGCAGA GAGCACAGCT TCTTGGGGGA GCACAGCTAC AGCCTGGACG AATGTCTCCC 
AGCCAGTTTG CACGGGTCCC TGGGTTTGTT GGTAGCCCAC TGGCTGCCAT GAATCCTAAG 
TTGCTACAAG GGCGCGTTGG GCAGATGCTT CCCCCAGCAC CAAGCTTCCG TGCCTTCTTT 
AGTGCTCCAC CCCCCGCTAC GCCACCTCCA CAGCAGCATC CCCCTGGCCC AGGACCTCAC 
CTACAAAACC TCAGACCTCA GGCCCCAATG TTTAGAGCAG ACACAACTCA CCTTCATCCA 
CAGCACCGGC GCCTGTTGCA TCAGAGGCAG CTGCAGAGCA GAAATCAGCA TCGGAATCTC 
AATGGTACTG GAGATAGAGG AGGGCACCAG TCCAGTCATC AAGATCATCT CCGGAAGGAT 
CCATATGCTA ATCTAATGTT GCAGCGGGAG AAGGATTGGG TCTCTAAAAT ACAGATGATG 
CAGCTGCAGA GCACTGATCC CTACCTGGAT GATTTCTATT ACCAGAATTA CTTTGAAAAA 
CTGGAGAAAT TGTCAGCTGC TGAGGAAATA CAAGGTGATG GCCCTAAGAA GGAGCGTACC 
AAGCTCATCA CCCCTCAGGT GGCCAAACTG GAGCATGCTT ATCAGCCTGT GCAGTTTGAG 
GGCTCGTTGG GGAAGCTTAC TGTCTCTAGT GTGAATAATC CTCGGAAGAT GATAGATGCT 
GTTGTGACAT CTCGAAGTGA GGATGATGAA ACAAAAGAAA AACAAGTTCG GGATAAGAGA 
AGAAAAACCC TTGTTATAAT TGAGAAAACC TATAGTTTAC TCCTTGATGT GGAGGATTAT 
GAAAGGCGCT ATCTCCTAAG TCTAGAAGAA GAGCGGCCTG CCCTGATGGA TGAAAGAAAG 
CACAAAATAT GTAGCATGTA TGACAACCTG AGGGGCAAAT TGCCTGGACA AGAGAGGCCA 
AGTGATGACC ACTTTGTACA GATCATGTGT ATCCGAAAAG GGAAGAGAAT GGTTGCCCGC 
ATTCTCCCTT TCCTCTCCAC AGAGCAAGCA GCTGACATTC TCATGGCAAC TGCCAGGAAC 
CTCCCTTTCC TTATCAAGAA GGATGCCCAA GATGAGGTGC TGCCATGCTT ACTGAGTCCC 
TTCTCTCTCC TCCTCTATCA TCTTCCTTCA GTGACTGTCA CCAGCCTTCT GCAACAGCTA 
ATGAACCTAC CTCAGAGTGC AAGTGCACCA GCGCCCTCCA ACTCTCACCT CACTGCTGTG 
CTCCAGAACA AGTTTGGCTT GTCACTGCTC CTAATCCTAC TAAGCCGTGG AGAAGACCTA 
CAGAGTTCAG ATCCTGCTAT AGAATCAACG CAAAATAACC AGTGGACAGA GGTGATGTTC 
ATGGCAACCC GAGAACTTCT ACGGATCCCC CAAGCTGCCC TGGCCAAACC AATCTCTATC 
CCTACAAATC TAGTGTCCCT TTTTTCTCGC TATGTTGACC GGCAGAAACT GAACTTGCTG 
GAAACAAAAC TGCAGCTGGT TCAGGGGATA CGGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006527010.1
CDS	624..2279
Translation	MPPRYPAPYGERISPNQLCSVPNSSLLGHPFPPNVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKLLQGRVGQMLPPAPSFRAFFSAPPPATPPPQQHPPGPGPHLQNLRPQAPMFRADTTHLHPQHRRLLHQRQLQSRNQHRNLNGTGDRGGHQSSHQDHLRKDPYANLMLQREKDWVSKIQMMQLQSTDPYLDDFYYQNYFEKLEKLSAAEEIQGDGPKKERTKLITPQVAKLEHAYQPVQFEGSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYERRYLLSLEEERPALMDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARILPFLSTEQAADILMATARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQLMNLPQSASAPAPSNSHLTAVLQNKFGLSLLLILLSRGEDLQSSDPAIESTQNNQWTEVMFMATRELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR

Target ORF information:

RefSeq Version	XM_006526947.2
Organism	Mus musculus(house mouse)
Definition	Mus musculus protein associated with topoisomerase II homolog 1 (yeast) (Patl1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006526947.2

ORF Insert Sequence:

ATGCCGCCAC GCTATCCTGC TCCCTATGGC GAGAGGATAT CTCCAAACCA GCTCTGCAGT 
GTCCCGAACT CCTCCCTCCT GGGCCACCCT TTTCCTCCTA ATGTTCCTCC TGTACTTAGT 
CCCCTGCAGA GAGCACAGCT TCTTGGGGGA GCACAGCTAC AGCCTGGACG AATGTCTCCC 
AGCCAGTTTG CACGGGTCCC TGGGTTTGTT GGTAGCCCAC TGGCTGCCAT GAATCCTAAG 
TTGCTACAAG GGCGCGTTGG GCAGATGCTT CCCCCAGCAC CAAGCTTCCG TGCCTTCTTT 
AGTGCTCCAC CCCCCGCTAC GCCACCTCCA CAGCAGCATC CCCCTGGCCC AGGACCTCAC 
CTACAAAACC TCAGACCTCA GGCCCCAATG TTTAGAGCAG ACACAACTCA CCTTCATCCA 
CAGCACCGGC GCCTGTTGCA TCAGAGGCAG CTGCAGAGCA GAAATCAGCA TCGGAATCTC 
AATGGTACTG GAGATAGAGG AGGGCACCAG TCCAGTCATC AAGATCATCT CCGGAAGGAT 
CCATATGCTA ATCTAATGTT GCAGCGGGAG AAGGATTGGG TCTCTAAAAT ACAGATGATG 
CAGCTGCAGA GCACTGATCC CTACCTGGAT GATTTCTATT ACCAGAATTA CTTTGAAAAA 
CTGGAGAAAT TGTCAGCTGC TGAGGAAATA CAAGGTGATG GCCCTAAGAA GGAGCGTACC 
AAGCTCATCA CCCCTCAGGT GGCCAAACTG GAGCATGCTT ATCAGCCTGT GCAGTTTGAG 
GGCTCGTTGG GGAAGCTTAC TGTCTCTAGT GTGAATAATC CTCGGAAGAT GATAGATGCT 
GTTGTGACAT CTCGAAGTGA GGATGATGAA ACAAAAGAAA AACAAGTTCG GGATAAGAGA 
AGAAAAACCC TTGTTATAAT TGAGAAAACC TATAGTTTAC TCCTTGATGT GGAGGATTAT 
GAAAGGCGCT ATCTCCTAAG TCTAGAAGAA GAGCGGCCTG CCCTGATGGA TGAAAGAAAG 
CACAAAATAT GTAGCATGTA TGACAACCTG AGGGGCAAAT TGCCTGGACA AGAGAGGCCA 
AGTGATGACC ACTTTGTACA GATCATGTGT ATCCGAAAAG GGAAGAGAAT GGTTGCCCGC 
ATTCTCCCTT TCCTCTCCAC AGAGCAAGCA GCTGACATTC TCATGGCAAC TGCCAGGAAC 
CTCCCTTTCC TTATCAAGAA GGATGCCCAA GATGAGGTGC TGCCATGCTT ACTGAGTCCC 
TTCTCTCTCC TCCTCTATCA TCTTCCTTCA GTGACTGTCA CCAGCCTTCT GCAACAGCTA 
ATGAACCTAC CTCAGAGTGC AAGTGCACCA GCGCCCTCCA ACTCTCACCT CACTGCTGTG 
CTCCAGAACA AGTTTGGCTT GTCACTGCTC CTAATCCTAC TAAGCCGTGG AGAAGACCTA 
CAGAGTTCAG ATCCTGCTAT AGAATCAACG CAAAATAACC AGTGGACAGA GGTGATGTTC 
ATGGCAACCC GAGAACTTCT ACGGATCCCC CAAGCTGCCC TGGCCAAACC AATCTCTATC 
CCTACAAATC TAGTGTCCCT TTTTTCTCGC TATGTTGACC GGCAGAAACT GAACTTGCTG 
GAAACAAAAC TGCAGCTGGT TCAGGGGATA CGGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Patl1 ( NM_172635.3 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_766223.2 Mus musculus protein associated with topoisomerase II homolog 1 (yeast) (Patl1), mRNA.

Price & Availability↑

CloneID	OMu03809
Clone ID Related Accession (Same CDS sequence)	NM_172635.3
Accession Version	NM_172635.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2313bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-21
Organism	Mus musculus(house mouse)
Product	protein PAT1 homolog 1
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK150301.1, AC124464.3, AK161738.1 and AV316026.1. On Aug 6, 2009 this sequence version replaced NM_172635.2. ##Evidence-Data-START## Transcript exon combination :: AK154873.1, AK150301.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849380 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGTTCCGCT ACGAGTCTTT GGAGGATTGT CCTCTAGATG AAGATGAAGA TGCATTTCAA 
GGCCTGGGAG AAGAAGATGA AGAAATTGAT CAATTTAATG ATGATACCTT TGGGTCAGGT 
GCAGTTGATG ATGATTGGCA GGAAGCACAT GAGCGCCTGG CTGAGTTGGA AGAGAAGCTA 
CCTGTGGCAG CTGATGAACA AACAGGCAAT GGAGAGAGAG ATGAGATGGA TTTGTTGGGT 
GACCATGAGG AGAATCTAGC AGAAAGGCTC AGTAAGATGG TGATTGAAAA TGAGCTAGAA 
GATCCAGCTA TCATGAGGGC AGTACAGACC AGGCCAGTTT TACAACCTCA ACCAGGAAGT 
CTGAATTCCA GCATCTGGGA TGGATCTGAA GTTCTGAGGC GAATCCGTGG ACCACTACTT 
GCTCAGGAAA TGCCTACAGT GTCTGTATTA GAGTATGCCT TGCCTCAGAG GCCCCTGCAG 
GGCCCAGAAG ATGATCGGGA CCTTTCTGAG CGAGCTTTAC CAAGGCGGTC AACATCACCT 
ATCATTGGAA GTCCTCCTGT TAGAGCCGTT CCTATAGGCA CCCCACCTAA GCAGATGGCT 
GTTCCCAGCT TCAACCAACA GATCCTGTGT CCGAAGCCTG TTCATGTTCG GCCCCCAATG 
CCGCCACGCT ATCCTGCTCC CTATGGCGAG AGGATATCTC CAAACCAGCT CTGCAGTGTC 
CCGAACTCCT CCCTCCTGGG CCACCCTTTT CCTCCTAATG TTCCTCCTGT ACTTAGTCCC 
CTGCAGAGAG CACAGCTTCT TGGGGGAGCA CAGCTACAGC CTGGACGAAT GTCTCCCAGC 
CAGTTTGCAC GGGTCCCTGG GTTTGTTGGT AGCCCACTGG CTGCCATGAA TCCTAAGTTG 
CTACAAGGGC GCGTTGGGCA GATGCTTCCC CCAGCACCAA GCTTCCGTGC CTTCTTTAGT 
GCTCCACCCC CCGCTACGCC ACCTCCACAG CAGCATCCCC CTGGCCCAGG ACCTCACCTA 
CAAAACCTCA GACCTCAGGC CCCAATGTTT AGAGCAGACA CAACTCACCT TCATCCACAG 
CACCGGCGCC TGTTGCATCA GAGGCAGCTG CAGAGCAGAA ATCAGCATCG GAATCTCAAT 
GGTACTGGAG ATAGAGGAGG GCACCAGTCC AGTCATCAAG ATCATCTCCG GAAGGATCCA 
TATGCTAATC TAATGTTGCA GCGGGAGAAG GATTGGGTCT CTAAAATACA GATGATGCAG 
CTGCAGAGCA CTGATCCCTA CCTGGATGAT TTCTATTACC AGAATTACTT TGAAAAACTG 
GAGAAATTGT CAGCTGCTGA GGAAATACAA GGTGATGGCC CTAAGAAGGA GCGTACCAAG 
CTCATCACCC CTCAGGTGGC CAAACTGGAG CATGCTTATC AGCCTGTGCA GTTTGAGGGC 
TCGTTGGGGA AGCTTACTGT CTCTAGTGTG AATAATCCTC GGAAGATGAT AGATGCTGTT 
GTGACATCTC GAAGTGAGGA TGATGAAACA AAAGAAAAAC AAGTTCGGGA TAAGAGAAGA 
AAAACCCTTG TTATAATTGA GAAAACCTAT AGTTTACTCC TTGATGTGGA GGATTATGAA 
AGGCGCTATC TCCTAAGTCT AGAAGAAGAG CGGCCTGCCC TGATGGATGA AAGAAAGCAC 
AAAATATGTA GCATGTATGA CAACCTGAGG GGCAAATTGC CTGGACAAGA GAGGCCAAGT 
GATGACCACT TTGTACAGAT CATGTGTATC CGAAAAGGGA AGAGAATGGT TGCCCGCATT 
CTCCCTTTCC TCTCCACAGA GCAAGCAGCT GACATTCTCA TGGCAACTGC CAGGAACCTC 
CCTTTCCTTA TCAAGAAGGA TGCCCAAGAT GAGGTGCTGC CATGCTTACT GAGTCCCTTC 
TCTCTCCTCC TCTATCATCT TCCTTCAGTG ACTGTCACCA GCCTTCTGCA ACAGCTAATG 
AACCTACCTC AGAGTGCAAG TGCACCAGCG CCCTCCAACT CTCACCTCAC TGCTGTGCTC 
CAGAACAAGT TTGGCTTGTC ACTGCTCCTA ATCCTACTAA GCCGTGGAGA AGACCTACAG 
AGTTCAGATC CTGCTATAGA ATCAACGCAA AATAACCAGT GGACAGAGGT GATGTTCATG 
GCAACCCGAG AACTTCTACG GATCCCCCAA GCTGCCCTGG CCAAACCAAT CTCTATCCCT 
ACAAATCTAG TGTCCCTTTT TTCTCGCTAT GTTGACCGGC AGAAACTGAA CTTGCTGGAA 
ACAAAACTGC AGCTGGTTCA GGGGATACGG TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_766223.2
CDS	165..2477
Translation	MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKLPVAADEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGSLNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPLQGPEDDRDLSERALPRRSTSPIIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERISPNQLCSVPNSSLLGHPFPPNVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKLLQGRVGQMLPPAPSFRAFFSAPPPATPPPQQHPPGPGPHLQNLRPQAPMFRADTTHLHPQHRRLLHQRQLQSRNQHRNLNGTGDRGGHQSSHQDHLRKDPYANLMLQREKDWVSKIQMMQLQSTDPYLDDFYYQNYFEKLEKLSAAEEIQGDGPKKERTKLITPQVAKLEHAYQPVQFEGSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYERRYLLSLEEERPALMDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARILPFLSTEQAADILMATARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQLMNLPQSASAPAPSNSHLTAVLQNKFGLSLLLILLSRGEDLQSSDPAIESTQNNQWTEVMFMATRELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR

Target ORF information:

RefSeq Version	NM_172635.3
Organism	Mus musculus(house mouse)
Definition	Mus musculus protein associated with topoisomerase II homolog 1 (yeast) (Patl1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_172635.3

ORF Insert Sequence:

ATGTTCCGCT ACGAGTCTTT GGAGGATTGT CCTCTAGATG AAGATGAAGA TGCATTTCAA 
GGCCTGGGAG AAGAAGATGA AGAAATTGAT CAATTTAATG ATGATACCTT TGGGTCAGGT 
GCAGTTGATG ATGATTGGCA GGAAGCACAT GAGCGCCTGG CTGAGTTGGA AGAGAAGCTA 
CCTGTGGCAG CTGATGAACA AACAGGCAAT GGAGAGAGAG ATGAGATGGA TTTGTTGGGT 
GACCATGAGG AGAATCTAGC AGAAAGGCTC AGTAAGATGG TGATTGAAAA TGAGCTAGAA 
GATCCAGCTA TCATGAGGGC AGTACAGACC AGGCCAGTTT TACAACCTCA ACCAGGAAGT 
CTGAATTCCA GCATCTGGGA TGGATCTGAA GTTCTGAGGC GAATCCGTGG ACCACTACTT 
GCTCAGGAAA TGCCTACAGT GTCTGTATTA GAGTATGCCT TGCCTCAGAG GCCCCTGCAG 
GGCCCAGAAG ATGATCGGGA CCTTTCTGAG CGAGCTTTAC CAAGGCGGTC AACATCACCT 
ATCATTGGAA GTCCTCCTGT TAGAGCCGTT CCTATAGGCA CCCCACCTAA GCAGATGGCT 
GTTCCCAGCT TCAACCAACA GATCCTGTGT CCGAAGCCTG TTCATGTTCG GCCCCCAATG 
CCGCCACGCT ATCCTGCTCC CTATGGCGAG AGGATATCTC CAAACCAGCT CTGCAGTGTC 
CCGAACTCCT CCCTCCTGGG CCACCCTTTT CCTCCTAATG TTCCTCCTGT ACTTAGTCCC 
CTGCAGAGAG CACAGCTTCT TGGGGGAGCA CAGCTACAGC CTGGACGAAT GTCTCCCAGC 
CAGTTTGCAC GGGTCCCTGG GTTTGTTGGT AGCCCACTGG CTGCCATGAA TCCTAAGTTG 
CTACAAGGGC GCGTTGGGCA GATGCTTCCC CCAGCACCAA GCTTCCGTGC CTTCTTTAGT 
GCTCCACCCC CCGCTACGCC ACCTCCACAG CAGCATCCCC CTGGCCCAGG ACCTCACCTA 
CAAAACCTCA GACCTCAGGC CCCAATGTTT AGAGCAGACA CAACTCACCT TCATCCACAG 
CACCGGCGCC TGTTGCATCA GAGGCAGCTG CAGAGCAGAA ATCAGCATCG GAATCTCAAT 
GGTACTGGAG ATAGAGGAGG GCACCAGTCC AGTCATCAAG ATCATCTCCG GAAGGATCCA 
TATGCTAATC TAATGTTGCA GCGGGAGAAG GATTGGGTCT CTAAAATACA GATGATGCAG 
CTGCAGAGCA CTGATCCCTA CCTGGATGAT TTCTATTACC AGAATTACTT TGAAAAACTG 
GAGAAATTGT CAGCTGCTGA GGAAATACAA GGTGATGGCC CTAAGAAGGA GCGTACCAAG 
CTCATCACCC CTCAGGTGGC CAAACTGGAG CATGCTTATC AGCCTGTGCA GTTTGAGGGC 
TCGTTGGGGA AGCTTACTGT CTCTAGTGTG AATAATCCTC GGAAGATGAT AGATGCTGTT 
GTGACATCTC GAAGTGAGGA TGATGAAACA AAAGAAAAAC AAGTTCGGGA TAAGAGAAGA 
AAAACCCTTG TTATAATTGA GAAAACCTAT AGTTTACTCC TTGATGTGGA GGATTATGAA 
AGGCGCTATC TCCTAAGTCT AGAAGAAGAG CGGCCTGCCC TGATGGATGA AAGAAAGCAC 
AAAATATGTA GCATGTATGA CAACCTGAGG GGCAAATTGC CTGGACAAGA GAGGCCAAGT 
GATGACCACT TTGTACAGAT CATGTGTATC CGAAAAGGGA AGAGAATGGT TGCCCGCATT 
CTCCCTTTCC TCTCCACAGA GCAAGCAGCT GACATTCTCA TGGCAACTGC CAGGAACCTC 
CCTTTCCTTA TCAAGAAGGA TGCCCAAGAT GAGGTGCTGC CATGCTTACT GAGTCCCTTC 
TCTCTCCTCC TCTATCATCT TCCTTCAGTG ACTGTCACCA GCCTTCTGCA ACAGCTAATG 
AACCTACCTC AGAGTGCAAG TGCACCAGCG CCCTCCAACT CTCACCTCAC TGCTGTGCTC 
CAGAACAAGT TTGGCTTGTC ACTGCTCCTA ATCCTACTAA GCCGTGGAGA AGACCTACAG 
AGTTCAGATC CTGCTATAGA ATCAACGCAA AATAACCAGT GGACAGAGGT GATGTTCATG 
GCAACCCGAG AACTTCTACG GATCCCCCAA GCTGCCCTGG CCAAACCAAT CTCTATCCCT 
ACAAATCTAG TGTCCCTTTT TTCTCGCTAT GTTGACCGGC AGAAACTGAA CTTGCTGGAA 
ACAAAACTGC AGCTGGTTCA GGGGATACGG TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Patl1 ( XM_030250884.1 ) cDNA ORF clone, Mus musculus(house mouse) -> XP_030106744.1 Mus musculus protein associated with topoisomerase II homolog 1 (yeast) (Patl1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OMu55441
Clone ID Related Accession (Same CDS sequence)	XM_030250884.1 , XM_006526947.2
Accession Version	XM_030250884.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1656bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-08-07
Organism	Mus musculus(house mouse)
Product	protein PAT1 homolog 1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000085.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCGCCAC GCTATCCTGC TCCCTATGGC GAGAGGATAT CTCCAAACCA GCTCTGCAGT 
GTCCCGAACT CCTCCCTCCT GGGCCACCCT TTTCCTCCTA ATGTTCCTCC TGTACTTAGT 
CCCCTGCAGA GAGCACAGCT TCTTGGGGGA GCACAGCTAC AGCCTGGACG AATGTCTCCC 
AGCCAGTTTG CACGGGTCCC TGGGTTTGTT GGTAGCCCAC TGGCTGCCAT GAATCCTAAG 
TTGCTACAAG GGCGCGTTGG GCAGATGCTT CCCCCAGCAC CAAGCTTCCG TGCCTTCTTT 
AGTGCTCCAC CCCCCGCTAC GCCACCTCCA CAGCAGCATC CCCCTGGCCC AGGACCTCAC 
CTACAAAACC TCAGACCTCA GGCCCCAATG TTTAGAGCAG ACACAACTCA CCTTCATCCA 
CAGCACCGGC GCCTGTTGCA TCAGAGGCAG CTGCAGAGCA GAAATCAGCA TCGGAATCTC 
AATGGTACTG GAGATAGAGG AGGGCACCAG TCCAGTCATC AAGATCATCT CCGGAAGGAT 
CCATATGCTA ATCTAATGTT GCAGCGGGAG AAGGATTGGG TCTCTAAAAT ACAGATGATG 
CAGCTGCAGA GCACTGATCC CTACCTGGAT GATTTCTATT ACCAGAATTA CTTTGAAAAA 
CTGGAGAAAT TGTCAGCTGC TGAGGAAATA CAAGGTGATG GCCCTAAGAA GGAGCGTACC 
AAGCTCATCA CCCCTCAGGT GGCCAAACTG GAGCATGCTT ATCAGCCTGT GCAGTTTGAG 
GGCTCGTTGG GGAAGCTTAC TGTCTCTAGT GTGAATAATC CTCGGAAGAT GATAGATGCT 
GTTGTGACAT CTCGAAGTGA GGATGATGAA ACAAAAGAAA AACAAGTTCG GGATAAGAGA 
AGAAAAACCC TTGTTATAAT TGAGAAAACC TATAGTTTAC TCCTTGATGT GGAGGATTAT 
GAAAGGCGCT ATCTCCTAAG TCTAGAAGAA GAGCGGCCTG CCCTGATGGA TGAAAGAAAG 
CACAAAATAT GTAGCATGTA TGACAACCTG AGGGGCAAAT TGCCTGGACA AGAGAGGCCA 
AGTGATGACC ACTTTGTACA GATCATGTGT ATCCGAAAAG GGAAGAGAAT GGTTGCCCGC 
ATTCTCCCTT TCCTCTCCAC AGAGCAAGCA GCTGACATTC TCATGGCAAC TGCCAGGAAC 
CTCCCTTTCC TTATCAAGAA GGATGCCCAA GATGAGGTGC TGCCATGCTT ACTGAGTCCC 
TTCTCTCTCC TCCTCTATCA TCTTCCTTCA GTGACTGTCA CCAGCCTTCT GCAACAGCTA 
ATGAACCTAC CTCAGAGTGC AAGTGCACCA GCGCCCTCCA ACTCTCACCT CACTGCTGTG 
CTCCAGAACA AGTTTGGCTT GTCACTGCTC CTAATCCTAC TAAGCCGTGG AGAAGACCTA 
CAGAGTTCAG ATCCTGCTAT AGAATCAACG CAAAATAACC AGTGGACAGA GGTGATGTTC 
ATGGCAACCC GAGAACTTCT ACGGATCCCC CAAGCTGCCC TGGCCAAACC AATCTCTATC 
CCTACAAATC TAGTGTCCCT TTTTTCTCGC TATGTTGACC GGCAGAAACT GAACTTGCTG 
GAAACAAAAC TGCAGCTGGT TCAGGGGATA CGGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_030106744.1
CDS	871..2526
Translation	MPPRYPAPYGERISPNQLCSVPNSSLLGHPFPPNVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKLLQGRVGQMLPPAPSFRAFFSAPPPATPPPQQHPPGPGPHLQNLRPQAPMFRADTTHLHPQHRRLLHQRQLQSRNQHRNLNGTGDRGGHQSSHQDHLRKDPYANLMLQREKDWVSKIQMMQLQSTDPYLDDFYYQNYFEKLEKLSAAEEIQGDGPKKERTKLITPQVAKLEHAYQPVQFEGSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYERRYLLSLEEERPALMDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARILPFLSTEQAADILMATARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQLMNLPQSASAPAPSNSHLTAVLQNKFGLSLLLILLSRGEDLQSSDPAIESTQNNQWTEVMFMATRELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR

Target ORF information:

RefSeq Version	XM_030250884.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus protein associated with topoisomerase II homolog 1 (yeast) (Patl1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_030250884.1

ORF Insert Sequence:

ATGCCGCCAC GCTATCCTGC TCCCTATGGC GAGAGGATAT CTCCAAACCA GCTCTGCAGT 
GTCCCGAACT CCTCCCTCCT GGGCCACCCT TTTCCTCCTA ATGTTCCTCC TGTACTTAGT 
CCCCTGCAGA GAGCACAGCT TCTTGGGGGA GCACAGCTAC AGCCTGGACG AATGTCTCCC 
AGCCAGTTTG CACGGGTCCC TGGGTTTGTT GGTAGCCCAC TGGCTGCCAT GAATCCTAAG 
TTGCTACAAG GGCGCGTTGG GCAGATGCTT CCCCCAGCAC CAAGCTTCCG TGCCTTCTTT 
AGTGCTCCAC CCCCCGCTAC GCCACCTCCA CAGCAGCATC CCCCTGGCCC AGGACCTCAC 
CTACAAAACC TCAGACCTCA GGCCCCAATG TTTAGAGCAG ACACAACTCA CCTTCATCCA 
CAGCACCGGC GCCTGTTGCA TCAGAGGCAG CTGCAGAGCA GAAATCAGCA TCGGAATCTC 
AATGGTACTG GAGATAGAGG AGGGCACCAG TCCAGTCATC AAGATCATCT CCGGAAGGAT 
CCATATGCTA ATCTAATGTT GCAGCGGGAG AAGGATTGGG TCTCTAAAAT ACAGATGATG 
CAGCTGCAGA GCACTGATCC CTACCTGGAT GATTTCTATT ACCAGAATTA CTTTGAAAAA 
CTGGAGAAAT TGTCAGCTGC TGAGGAAATA CAAGGTGATG GCCCTAAGAA GGAGCGTACC 
AAGCTCATCA CCCCTCAGGT GGCCAAACTG GAGCATGCTT ATCAGCCTGT GCAGTTTGAG 
GGCTCGTTGG GGAAGCTTAC TGTCTCTAGT GTGAATAATC CTCGGAAGAT GATAGATGCT 
GTTGTGACAT CTCGAAGTGA GGATGATGAA ACAAAAGAAA AACAAGTTCG GGATAAGAGA 
AGAAAAACCC TTGTTATAAT TGAGAAAACC TATAGTTTAC TCCTTGATGT GGAGGATTAT 
GAAAGGCGCT ATCTCCTAAG TCTAGAAGAA GAGCGGCCTG CCCTGATGGA TGAAAGAAAG 
CACAAAATAT GTAGCATGTA TGACAACCTG AGGGGCAAAT TGCCTGGACA AGAGAGGCCA 
AGTGATGACC ACTTTGTACA GATCATGTGT ATCCGAAAAG GGAAGAGAAT GGTTGCCCGC 
ATTCTCCCTT TCCTCTCCAC AGAGCAAGCA GCTGACATTC TCATGGCAAC TGCCAGGAAC 
CTCCCTTTCC TTATCAAGAA GGATGCCCAA GATGAGGTGC TGCCATGCTT ACTGAGTCCC 
TTCTCTCTCC TCCTCTATCA TCTTCCTTCA GTGACTGTCA CCAGCCTTCT GCAACAGCTA 
ATGAACCTAC CTCAGAGTGC AAGTGCACCA GCGCCCTCCA ACTCTCACCT CACTGCTGTG 
CTCCAGAACA AGTTTGGCTT GTCACTGCTC CTAATCCTAC TAAGCCGTGG AGAAGACCTA 
CAGAGTTCAG ATCCTGCTAT AGAATCAACG CAAAATAACC AGTGGACAGA GGTGATGTTC 
ATGGCAACCC GAGAACTTCT ACGGATCCCC CAAGCTGCCC TGGCCAAACC AATCTCTATC 
CCTACAAATC TAGTGTCCCT TTTTTCTCGC TATGTTGACC GGCAGAAACT GAACTTGCTG 
GAAACAAAAC TGCAGCTGGT TCAGGGGATA CGGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

High-throughput discovery of novel developmental phenotypes.
Nature537(7621)508-514(2016 09)
Dickinson ME,Flenniken AM,Ji X,Teboul L,Wong MD,White JK,Meehan TF,Weninger WJ,Westerberg H,Adissu H,Baker CN,Bower L,Brown JM,Caddle LB,Chiani F,Clary D,Cleak J,Daly MJ,Denegre JM,Doe B,Dolan ME,Edie SM,Fuchs H,Gailus-Durner V,Galli A,Gambadoro A,Gallegos J,Guo S,Horner NR,Hsu CW,Johnson SJ,Kalaga S,Keith LC,Lanoue L,Lawson TN,Lek M,Mark M,Marschall S,Mason J,McElwee ML,Newbigging S,Nutter LM,Peterson KA,Ramirez-Solis R,Rowland DJ,Ryder E,Samocha KE,Seavitt JR,Selloum M,Szoke-Kovacs Z,Tamura M,Trainor AG,Tudose I,Wakana S,Warren J,Wendling O,West DB,Wong L,Yoshiki A,,,,,,,,,MacArthur DG,Tocchini-Valentini GP,Gao X,Flicek P,Bradley A,Skarnes WC,Justice MJ,Parkinson HE,Moore M,Wells S,Braun RE,Svenson KL,de Angelis MH,Herault Y,Mohun T,Mallon AM,Henkelman RM,Brown SD,Adams DJ,Lloyd KC,McKerlie C,Beaudet AL,Bu?an M,Murray SA

The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Nucleic acids research42(Database issue)D802-9(2014 Jan)
Koscielny G,Yaikhom G,Iyer V,Meehan TF,Morgan H,Atienza-Herrero J,Blake A,Chen CK,Easty R,Di Fenza A,Fiegel T,Grifiths M,Horne A,Karp NA,Kurbatova N,Mason JC,Matthews P,Oakley DJ,Qazi A,Regnart J,Retha A,Santos LA,Sneddon DJ,Warren J,Westerberg H,Wilson RJ,Melvin DG,Smedley D,Brown SD,Flicek P,Skarnes WC,Mallon AM,Parkinson H

Distinct functions of maternal and somatic Pat1 protein paralogs.
RNA (New York, N.Y.)16(11)2094-107(2010 Nov)
Marnef A,Maldonado M,Bugaut A,Balasubramanian S,Kress M,Weil D,Standart N

Identification and developmental analysis of genes expressed by dopaminergic neurons of the substantia nigra pars compacta.
Molecular and cellular neurosciences25(3)394-405(2004 Mar)
Thuret S,Bhatt L,O'Leary DD,Simon HH

BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Nucleic acids research31(1)278-81(2003 Jan)
Stryke D,Kawamoto M,Huang CC,Johns SJ,King LA,Harper CA,Meng EC,Lee RE,Yee A,L'Italien L,Chuang PT,Young SG,Skarnes WC,Babbitt PC,Ferrin TE

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Patl1 cDNA ORF clone, Mus musculus(house mouse)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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