Aplf cDNA ORF clone, Mus caroli(Ryukyu mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Aplf
Entrez Gene ID	110295695
Full Name	aprataxin and PNKP like factor
Gene Type	protein-coding
Organism	Mus caroli(Ryukyu mouse)

mRNA and Protein(s)

mRNA	Protein	Name
XM_021164109.1	XP_021019768.1	aprataxin and PNK-like factor
XM_029478224.1	XP_029334084.1	aprataxin and PNK-like factor

Pathways from BioSystems
Gene Ontology

The following Aplf gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Aplf cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OMv02308	XM_021164109.1 Latest version!	Mus caroli aprataxin and PNKP like factor (Aplf), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OMv74091	XM_029478224.1 Latest version!	Mus caroli aprataxin and PNKP like factor (Aplf), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Aplf ( XM_021164109.1 ) cDNA ORF clone, Mus caroli(Ryukyu mouse) -> XP_021019768.1 Mus caroli aprataxin and PNKP like factor (Aplf), mRNA.

Price & Availability↑

CloneID	OMv02308
Clone ID Related Accession (Same CDS sequence)	XM_021164109.1
Accession Version	XM_021164109.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1398bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-05-20
Organism	Mus caroli(Ryukyu mouse)
Product	aprataxin and PNK-like factor
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_034575.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus caroli Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 5% of CDS bases ##RefSeq-Attributes-END##

ATGCCTTCGG ACTTCTTTCT GCAGCCTCTG GACGGCGGTC CTCGCGTACC CGTGGGGCCG 
GGGCAGACTG TGATAGGCCG CGGGCCGCTG CTGGGAATAA CAGACAAAAG AGTATCCAGA 
AGACATGCCA TTCTTGAAGT GGTTGATAGT CAGCTTCGAA TCAAGCCAAT TCATAGGAAT 
CCATGTTTCT ACCAGTCCTC GGAGAAGAGC CAACACTCGC CAATGGAGAC GCAAGTGTGG 
AGCCAGTTGC ATCCCGGGGA TAGCTTTTCC CTGTTACTTG ACAAGTATGC TTTCCGTGTT 
TTCTCTNCAG AATCTGAAGT GGAGATGGAG TGTACTCTGA GAAACAGTCA GATGCTTGAT 
GAAGATGATA TATTGAGTGA GATGCAGAAG TCCCCTGTGG TTAACTTACC TGNTAAGACA 
ACTGGTGCCT CACAGCTGCA AGGAAGCNCT GAAATAACCA AGACCAAGTG TCCCACCATA 
GATCCTATGT CCTCTTCAGG TGAATGCAGA GCGTTCNGTG AGCACCAGCC ACGTCCTACC 
CAGAGGAAAA GAATCCTCCC AGCTTGGATG TTGGCGGCAA GTCTAAGTGA TCGGAGCCTC 
TCCACACCGG CTGAGGGGGG AGAGATTGGT GGGATTAAAG ANGTGTGCCA CCACTGCCCG 
ACATTTGCCT TTTTTAATGA TGCCTTTTCT GTATTTCTTT TACAGAATGT TCCAGAATCG 
TCATCTTCAA ACATAGCAAA GGACCCAGAT GTGGATATTG TGCAGACAAA TAAACAGAAG 
GACGGGATTT TAAAAGAGGA ACTTGGTGAG GTCTCTAAAC ATAAAGCCGC CACCAAACCA 
ACCACAAACG AAGAGGGCGA GAGTTGTGCA AGTGTCCAAA GCAAGTCACC TCCTGAGAAA 
TCTCAAGGAG GCCATCCTGA GTCCAGCTCT GCTCCCTCCA GTCCTGATGC TTCGCACACA 
GACACAGCTG ACCCAGTGCT GGGCTGTTCA GAAGAAAGCA AGGTCCGGAG GANGGCCTGC 
ATGTATGGGG CCAACTGCTA CAGGAAGAAC CCCCTCCACT TTCAACACTT CAGCCACCCT 
GGTGACAGTG ACTATGGAGA GGTACATGGC ACAGATGAAG GTGTGATTGG TGACAGGCCC 
GAGTGTCCCT ATGGGGCGTC TTGTTACAGG AAGAACCCCC AGCACAAGAT GGAATATAGG 
CACAGTGCAC TTCCGGCCAG AGTTGCTCTG GATGAAGATG ACGATGATGT CGGGCAACCC 
AGTGACGATG AGGACGAGGA AGACTATGAG CCGACAGATG AAGATTCTGA TTGGCAACCA 
GGAAAGGACG ATGAGGAGCN GGAAGATGTG GATGAGCTTT TGAAAGAAGC AAAAAGGTTT 
ATGAGAAGGA AGAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_021019768.1
CDS	182..1579
Translation	MPSDFFLQPLDGGPRVPVGPGQTVIGRGPLLGITDKRVSRRHAILEVVDSQLRIKPIHRNPCFYQSSEKSQHSPMETQVWSQLHPGDSFSLLLDKYAFRVFSnullESEVEMECTLRNSQMLDEDDILSEMQKSPVVNLPnullKTTGASQLQGSnullEITKTKCPTIDPMSSSGECRAFnullEHQPRPTQRKRILPAWMLAASLSDRSLSTPAEGGEIGGIKnullVCHHCPTFAFFNDAFSVFLLQNVPESSSSNIAKDPDVDIVQTNKQKDGILKEELGEVSKHKAATKPTTNEEGESCASVQSKSPPEKSQGGHPESSSAPSSPDASHTDTADPVLGCSEESKVRRnullACMYGANCYRKNPLHFQHFSHPGDSDYGEVHGTDEGVIGDRPECPYGASCYRKNPQHKMEYRHSALPARVALDEDDDDVGQPSDDEDEEDYEPTDEDSDWQPGKDDEEnullEDVDELLKEAKRFMRRKK

Target ORF information:

RefSeq Version	XM_021164109.1
Organism	Mus caroli(Ryukyu mouse)
Definition	Mus caroli aprataxin and PNKP like factor (Aplf), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021164109.1

ORF Insert Sequence:

ATGCCTTCGG ACTTCTTTCT GCAGCCTCTG GACGGCGGTC CTCGCGTACC CGTGGGGCCG 
GGGCAGACTG TGATAGGCCG CGGGCCGCTG CTGGGAATAA CAGACAAAAG AGTATCCAGA 
AGACATGCCA TTCTTGAAGT GGTTGATAGT CAGCTTCGAA TCAAGCCAAT TCATAGGAAT 
CCATGTTTCT ACCAGTCCTC GGAGAAGAGC CAACACTCGC CAATGGAGAC GCAAGTGTGG 
AGCCAGTTGC ATCCCGGGGA TAGCTTTTCC CTGTTACTTG ACAAGTATGC TTTCCGTGTT 
TTCTCTNCAG AATCTGAAGT GGAGATGGAG TGTACTCTGA GAAACAGTCA GATGCTTGAT 
GAAGATGATA TATTGAGTGA GATGCAGAAG TCCCCTGTGG TTAACTTACC TGNTAAGACA 
ACTGGTGCCT CACAGCTGCA AGGAAGCNCT GAAATAACCA AGACCAAGTG TCCCACCATA 
GATCCTATGT CCTCTTCAGG TGAATGCAGA GCGTTCNGTG AGCACCAGCC ACGTCCTACC 
CAGAGGAAAA GAATCCTCCC AGCTTGGATG TTGGCGGCAA GTCTAAGTGA TCGGAGCCTC 
TCCACACCGG CTGAGGGGGG AGAGATTGGT GGGATTAAAG ANGTGTGCCA CCACTGCCCG 
ACATTTGCCT TTTTTAATGA TGCCTTTTCT GTATTTCTTT TACAGAATGT TCCAGAATCG 
TCATCTTCAA ACATAGCAAA GGACCCAGAT GTGGATATTG TGCAGACAAA TAAACAGAAG 
GACGGGATTT TAAAAGAGGA ACTTGGTGAG GTCTCTAAAC ATAAAGCCGC CACCAAACCA 
ACCACAAACG AAGAGGGCGA GAGTTGTGCA AGTGTCCAAA GCAAGTCACC TCCTGAGAAA 
TCTCAAGGAG GCCATCCTGA GTCCAGCTCT GCTCCCTCCA GTCCTGATGC TTCGCACACA 
GACACAGCTG ACCCAGTGCT GGGCTGTTCA GAAGAAAGCA AGGTCCGGAG GANGGCCTGC 
ATGTATGGGG CCAACTGCTA CAGGAAGAAC CCCCTCCACT TTCAACACTT CAGCCACCCT 
GGTGACAGTG ACTATGGAGA GGTACATGGC ACAGATGAAG GTGTGATTGG TGACAGGCCC 
GAGTGTCCCT ATGGGGCGTC TTGTTACAGG AAGAACCCCC AGCACAAGAT GGAATATAGG 
CACAGTGCAC TTCCGGCCAG AGTTGCTCTG GATGAAGATG ACGATGATGT CGGGCAACCC 
AGTGACGATG AGGACGAGGA AGACTATGAG CCGACAGATG AAGATTCTGA TTGGCAACCA 
GGAAAGGACG ATGAGGAGCN GGAAGATGTG GATGAGCTTT TGAAAGAAGC AAAAAGGTTT 
ATGAGAAGGA AGAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Aplf ( XM_029478224.1 ) cDNA ORF clone, Mus caroli(Ryukyu mouse) -> XP_029334084.1 Mus caroli aprataxin and PNKP like factor (Aplf), mRNA.

Price & Availability↑

CloneID	OMv74091
Clone ID Related Accession (Same CDS sequence)	XM_029478224.1
Accession Version	XM_029478224.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1518bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-06-09
Organism	Mus caroli(Ryukyu mouse)
Product	aprataxin and PNK-like factor
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_034575.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus caroli Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 6% of CDS bases ##RefSeq-Attributes-END##

ATGCCTTCGG ACTTCTTTCT GCAGCCTCTG GACGGCGGTC CTCGCGTACC CGTGGGGCCG 
GGGCAGACTG TGATAGGCCG CGGGCCGCTG CTGGGAATAA CAGACAAAAG AGTATCCAGA 
AGACATGCCA TTCTTGAAGT GGTTGATAGT CAGCTTCGAA TCAAGCCAAT TCATAGGAAT 
CCATGTTTCT ACCAGTCCTC GGAGAAGAGC CAACACTCGC CAATGGAGAC GCAAGTGTGG 
AGCCAGTTGC ATCCCGGGGA TAGCTTTTCC CTGTTACTTG ACAAGTATGC TTTCCGTGTT 
TTCTCTNCAG AATCTGAAGT GGAGATGGAG TGTACTCTGA GAAACAGTCA GATGCTTGAT 
GAAGATGATA TATTGAGTGA GATGCAGAAG TCCCCTGTGG TTAACTTACC TGNTAAGACA 
ACTGGTGCCT CACAGCTGCA AGGAAGCNCT GAAATAACCA AGACCAAGTG TCCCACCATA 
GATCCTATGT CCTCTTCAGG TGAATGCAGA GCGTTCNGTG AGCACCAGCC ACGTCCTACC 
CAGAGGAAAA GAATCCTCCC AGCTTGGATG TTGGCGGCAA GTCTAAGTGA TCGGAGCCTC 
TCCACACCGG CTGAGGGGGG AGGTAGGTTC CAGGCTTTGC TACTGTTGAG TGTCGAGGAA 
GCATTAAAGA CAATGTTAGG TTCTTCTCAG CAAATAGANG TAGAGTGGTG GCTGCATGCG 
GGCACACTGA CCTTGAACTC AGAGATTGGT GGGATTAAAG ANGTGTGCCA CCACTGCCCG 
ACATTTGCCT TTTTTAATGA TGCCTTTTCT GTATTTCTTT TACAGAATGT TCCAGAATCG 
TCATCTTCAA ACATAGCAAA GGACCCAGAT GTGGATATTG TGCAGACAAA TAAACAGAAG 
GACGGGATTT TAAAAGAGGA ACTTGGTGAG GTCTCTAAAC ATAAAGCCGC CACCAAACCA 
ACCACAAACG AAGAGGGCGA GAGTTGTGCA AGTGTCCAAA GCAAGTCACC TCCTGAGAAA 
TCTCAAGGAG GCCATCCTGA GTCCAGCTCT GCTCCCTCCA GTCCTGATGC TTCGCACACA 
GACACAGCTG ACCCAGTGCT GGGCTGTTCA GAAGAAAGCA AGGTCCGGAG GANGGCCTGC 
ATGTATGGGG CCAACTGCTA CAGGAAGAAC CCCCTCCACT TTCAACACTT CAGCCACCCT 
GGTGACAGTG ACTATGGAGA GGTACATGGC ACAGATGAAG GTGTGATTGG TGACAGGCCC 
GAGTGTCCCT ATGGGGCGTC TTGTTACAGG AAGAACCCCC AGCACAAGAT GGAATATAGG 
CACAGTGCAC TTCCGGCCAG AGTTGCTCTG GATGAAGATG ACGATGATGT CGGGCAACCC 
AGTGACGATG AGGACGAGGA AGACTATGAG CCGACAGATG AAGATTCTGA TTGGCAACCA 
GGAAAGGACG ATGAGGAGCN GGAAGATGTG GATGAGCTTT TGAAAGAAGC AAAAAGGTTT 
ATGAGAAGGA AGAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_029334084.1
CDS	189..1706
Translation	MPSDFFLQPLDGGPRVPVGPGQTVIGRGPLLGITDKRVSRRHAILEVVDSQLRIKPIHRNPCFYQSSEKSQHSPMETQVWSQLHPGDSFSLLLDKYAFRVFSnullESEVEMECTLRNSQMLDEDDILSEMQKSPVVNLPnullKTTGASQLQGSnullEITKTKCPTIDPMSSSGECRAFnullEHQPRPTQRKRILPAWMLAASLSDRSLSTPAEGGGRFQALLLLSVEEALKTMLGSSQQInullVEWWLHAGTLTLNSEIGGIKnullVCHHCPTFAFFNDAFSVFLLQNVPESSSSNIAKDPDVDIVQTNKQKDGILKEELGEVSKHKAATKPTTNEEGESCASVQSKSPPEKSQGGHPESSSAPSSPDASHTDTADPVLGCSEESKVRRnullACMYGANCYRKNPLHFQHFSHPGDSDYGEVHGTDEGVIGDRPECPYGASCYRKNPQHKMEYRHSALPARVALDEDDDDVGQPSDDEDEEDYEPTDEDSDWQPGKDDEEnullEDVDELLKEAKRFMRRKK

Target ORF information:

RefSeq Version	XM_029478224.1
Organism	Mus caroli(Ryukyu mouse)
Definition	Mus caroli aprataxin and PNKP like factor (Aplf), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_029478224.1

ORF Insert Sequence:

ATGCCTTCGG ACTTCTTTCT GCAGCCTCTG GACGGCGGTC CTCGCGTACC CGTGGGGCCG 
GGGCAGACTG TGATAGGCCG CGGGCCGCTG CTGGGAATAA CAGACAAAAG AGTATCCAGA 
AGACATGCCA TTCTTGAAGT GGTTGATAGT CAGCTTCGAA TCAAGCCAAT TCATAGGAAT 
CCATGTTTCT ACCAGTCCTC GGAGAAGAGC CAACACTCGC CAATGGAGAC GCAAGTGTGG 
AGCCAGTTGC ATCCCGGGGA TAGCTTTTCC CTGTTACTTG ACAAGTATGC TTTCCGTGTT 
TTCTCTNCAG AATCTGAAGT GGAGATGGAG TGTACTCTGA GAAACAGTCA GATGCTTGAT 
GAAGATGATA TATTGAGTGA GATGCAGAAG TCCCCTGTGG TTAACTTACC TGNTAAGACA 
ACTGGTGCCT CACAGCTGCA AGGAAGCNCT GAAATAACCA AGACCAAGTG TCCCACCATA 
GATCCTATGT CCTCTTCAGG TGAATGCAGA GCGTTCNGTG AGCACCAGCC ACGTCCTACC 
CAGAGGAAAA GAATCCTCCC AGCTTGGATG TTGGCGGCAA GTCTAAGTGA TCGGAGCCTC 
TCCACACCGG CTGAGGGGGG AGGTAGGTTC CAGGCTTTGC TACTGTTGAG TGTCGAGGAA 
GCATTAAAGA CAATGTTAGG TTCTTCTCAG CAAATAGANG TAGAGTGGTG GCTGCATGCG 
GGCACACTGA CCTTGAACTC AGAGATTGGT GGGATTAAAG ANGTGTGCCA CCACTGCCCG 
ACATTTGCCT TTTTTAATGA TGCCTTTTCT GTATTTCTTT TACAGAATGT TCCAGAATCG 
TCATCTTCAA ACATAGCAAA GGACCCAGAT GTGGATATTG TGCAGACAAA TAAACAGAAG 
GACGGGATTT TAAAAGAGGA ACTTGGTGAG GTCTCTAAAC ATAAAGCCGC CACCAAACCA 
ACCACAAACG AAGAGGGCGA GAGTTGTGCA AGTGTCCAAA GCAAGTCACC TCCTGAGAAA 
TCTCAAGGAG GCCATCCTGA GTCCAGCTCT GCTCCCTCCA GTCCTGATGC TTCGCACACA 
GACACAGCTG ACCCAGTGCT GGGCTGTTCA GAAGAAAGCA AGGTCCGGAG GANGGCCTGC 
ATGTATGGGG CCAACTGCTA CAGGAAGAAC CCCCTCCACT TTCAACACTT CAGCCACCCT 
GGTGACAGTG ACTATGGAGA GGTACATGGC ACAGATGAAG GTGTGATTGG TGACAGGCCC 
GAGTGTCCCT ATGGGGCGTC TTGTTACAGG AAGAACCCCC AGCACAAGAT GGAATATAGG 
CACAGTGCAC TTCCGGCCAG AGTTGCTCTG GATGAAGATG ACGATGATGT CGGGCAACCC 
AGTGACGATG AGGACGAGGA AGACTATGAG CCGACAGATG AAGATTCTGA TTGGCAACCA 
GGAAAGGACG ATGAGGAGCN GGAAGATGTG GATGAGCTTT TGAAAGAAGC AAAAAGGTTT 
ATGAGAAGGA AGAAGTAG