LOC11428205 cDNA ORF clone, Medicago truncatula(barrel medic)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC11428205
Entrez Gene ID	11428205
Full Name	LRR receptor-like kinase family protein
Gene Type	protein-coding
Organism	Medicago truncatula(barrel medic)

mRNA and Protein(s)

mRNA	Protein	Name
XM_003602296.2	XP_003602344.1	LRR receptor-like kinase family protein
XM_003602296.3	XP_003602344.1	probable LRR receptor-like serine/threonine-protein kinase At3g47570

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

An improved genome release (version Mt4.0) for the model legume Medicago truncatula.
Tang H, Krishnakumar V, Bidwell S, Rosen B, Chan A, Zhou S, Gentzbittel L, Childs KL, Yandell M, Gundlach H, Mayer KF, Schwartz DC, Town CD
BMC genomics15312(2014 Apr)

The Medicago genome provides insight into the evolution of rhizobial symbioses.
Young ND, Debell? F, Oldroyd GE, Geurts R, Cannon SB, Udvardi MK, Benedito VA, Mayer KF, Gouzy J, Schoof H, Van de Peer Y, Proost S, Cook DR, Meyers BC, Spannagl M, Cheung F, De Mita S, Krishnakumar V, Gundlach H, Zhou S, Mudge J, Bharti AK, Murray JD, Naoumkina MA, Rosen B, Silverstein KA, Tang H, Rombauts S, Zhao PX, Zhou P, Barbe V, Bardou P, Bechner M, Bellec A, Berger A, Berg?s H, Bidwell S, Bisseling T, Choisne N, Couloux A, Denny R, Deshpande S, Dai X, Doyle JJ, Dudez AM, Farmer AD, Fouteau S, Franken C, Gibelin C, Gish J, Goldstein S, Gonz?lez AJ, Green PJ, Hallab A, Hartog M, Hua A, Humphray SJ, Jeong DH, Jing Y, J?cker A, Kenton SM, Kim DJ, Klee K, Lai H, Lang C, Lin S, Macmil SL, Magdelenat G, Matthews L, McCorrison J, Monaghan EL, Mun JH, Najar FZ, Nicholson C, Noirot C, O'Bleness M, Paule CR, Poulain J, Prion F, Qin B, Qu C, Retzel EF, Riddle C, Sallet E, Samain S, Samson N, Sanders I, Saurat O, Scarpelli C, Schiex T, Segurens B, Severin AJ, Sherrier DJ, Shi R, Sims S, Singer SR, Sinharoy S, Sterck L, Viollet A, Wang BB, Wang K, Wang M, Wang X, Warfsmann J, Weissenbach J, White DD, White JD, Wiley GB, Wincker P, Xing Y, Yang L, Yao Z, Ying F, Zhai J, Zhou L, Zuber A, D?nari? J, Dixon RA, May GD, Schwartz DC, Rogers J, Qu?tier F, Town CD, Roe BA
Nature480(7378)520-4(2011 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC11428205 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC11428205 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OMe199957	XM_003602296.3 Latest version!	Medicago truncatula probable LRR receptor-like serine/threonine-protein kinase At3g47570 (LOC11428205), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$629.30 $899.00
View Old Accession Versions >>
OMe199957	XM_003602296.2	Medicago truncatula LRR receptor-like kinase family protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$629.30 $899.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC11428205 ( XM_003602296.2 ) cDNA ORF clone, Medicago truncatula(barrel medic) -> XP_003602344.1 Medicago truncatula LRR receptor-like kinase family protein partial mRNA.

Price & Availability↑

CloneID	OMe199957
Clone ID Related Accession (Same CDS sequence)	XM_003602296.2 , XM_003602296.3
Accession Version	XM_003602296.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3135bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-08-24
Organism	Medicago truncatula(barrel medic)
Product	LRR receptor-like kinase family protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_016409). On Aug 25, 2015 this sequence version replaced XM_003602296.1. ##Genome-Annotation-Data-START## Annotation Provider :: JCVI Annotation Version :: Mt4.0v2 Annotation Pipeline :: JCVI Eukaryotic Genome Annotation Pipeline Annotation Method :: EVidenceModeler (EVM), PASA Features Annotated :: Gene; mRNA; CDS; tRNA URL :: http://www.jcvi.org/medicago ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on the 5' end.

ATGACCAGTT CTTTTCCTAC TACTACTAAA ACCAAAGTCC AAAGGCACCA TTTAGCAGAC 
ATCAAATATC AAACAAGGAT TTCAGTCCTA CTACTACCAA CCACATTGAG CTATACTACT 
ATCAATATGA TCCAAATACG ACTTATTTTG CTCCTATGTT TCCTACTTTC TCATTTCCAT 
GTCATCATTT GCAACAATAA CACAGACAAA GATATTCTTC TATCATTCAA ATTACAAGTA 
ACTGATCCAA ACAATGCCTT GTCCAGTTGG AAACAAGATT CTAATCATTG TACCTGGTAT 
GGTGTCAACT GTTCCAAAGT TGATGAAAGA GTTCAATCTC TAACCTTACG GGGACTTGGC 
CTCTCTGGTA AACTACCCTC TAACCTCTCC AACCTCACTT ACCTTCATTC ACTTGACCTT 
TCCAATAACA CTTTTCATGG CCAAATTCCA TTCCAATTTT CTCATCTCTC ACTCCTCAAT 
GTCATTCAAT TAGCTATGAA CGATCTCAAT GGCACACTTC CACCACAATT GGGTCAACTC 
CATAATCTAC AAAGTTTAGA CTTTTCTGTC AATAATCTCA CTGGTAAAAT TCCTTCAACC 
TTTGGCAATC TCTTATCTCT CAAGAATCTT TCCATGGCAA GGAACATGCT TGAGGGTGAA 
ATTCCAAGTG AATTGGGCAA TCTCCACAAT CTTTCAAGAC TTCAACTCTC AGAGAATAAC 
TTCACCGGCA AGCTTCCTAC TTCTATCTTC AACTTATCTT CCTTAGTTTT CTTATCCCTC 
ACACAGAACA ATCTATCAGG CGAGTTGCCA CAAAATTTCG GCGAAGCTTT TCCGAATATA 
GGGACACTTG CTTTGGCAAC CAATAGATTT GAAGGGGTAA TTCCTAGTTC CATATCCAAT 
TCATCACATC TTCAAATTAT TGATCTTTCT AACAATAGGT TTCATGGGCC AATGCCTCTT 
TTCAACAACT TGAAAAACCT CACTCATTTG ACTCTTGGTA AAAACTATCT CACTTCCAAC 
ACATCATTGA ATTTTCAGTT CTTTGAATCC CTTCGAAACT CAACTCAGTT GCAGATTCTT 
ATGATCAATG ATAACAACTT GACCGGGGAA CTTCCAAGTT CGGTTGATTA TCTTTCAAGC 
AATCTACAAC AGTTTTGTGT TGCTAATAAT CAGCTAAATG GAAGCATTCC TCATGGAATG 
AAGAAGTTTC AAAATCTCAT ATCCTTCTCT TTTGAACAGA ATTATTTCAC AGGAGAGTTA 
CCATTAGAAT TAGGAACACT CAAGAAATTG GAGAGGCTAT TGATATACCA AAATAGATTG 
TCTGGTGAAA TTCCAGATAT ATTTGGAAAT TTTACAAATC TGTTTATTCT AGCAATAGGA 
AACAACCAGT TCTCAGGTAG AATTCATGCA AGTATCGGAC GATGCAAGAG ATTGAGTTTT 
CTGGACTTGC GAATGAATAA GCTTGCTGGT GTCATACCCA TGGAGATTTT TCAACTCTCT 
GGCTTGACAA CTTTATACTT ACATGGAAAT TCTCTGAACG GTTCGCTTCC TCCTCAATTC 
AAAATGGAGC AGCTAGAGGC CATGGTTGTT TCGGACAACA AGCTGTCAGG GAACATTCCT 
AAAATCGAAG TTAACGGATT GAAAACACTT ATGATGGCAA GAAACAATTT TAGTGGCTCA 
ATTCCAAATA GTCTAGGGGA TTTGCCATCC CTTGTGACTT TAGATCTATC ATCAAACAGT 
CTCACTGGTC CAATCCCTGA GAGTTTAGAA AAGCTCAAGT ATATGGTGAA ATTAAATTTG 
TCCTTCAACA AATTGGAAGG GGAAGTTCCT ATGGAAGGTA TTTTTATGAA CCTAAGCCAG 
GTTGATCTCC AAGGTAACAA CAAACTATGT GGCCTTAACA ATCAAGTTAT GCACAAGTTA 
GGAGTCACTT TGTGTGTTGC AGGTAAGAAA AACAAGAGAA ACATTTTACT ACCTATCATA 
CTAGCGATTA TAGGTGCGGC TGTTTTGTTT GCTTCAATGA TCTATCTATT TTGGCTGCTA 
ATGTCCTTAA AGAAGAAACA CAAGGCAGAG AAAACAAGTT TGTCATCAAC TACTATAAAA 
GGGTTGCATC AAAATATATC CTATGGTGAT ATTAGGCTTG CTACGAACAA TTTTTCAGCT 
GCAAATATGG TTGGAAAAGG AGGCTTTGGA TCTGTTTACA AGGGTGTGTT CAACATCAGC 
AGTTATGAAA ATCAAACCAC CACACTTGCT GTTAAAGTTC TTGACCTGCA ACAAAGCAAA 
GCCTCTCAGA GTTTTAGTGC AGAATGTGAA GCTTTGAAAA ATGTTAGGCA TCGGAATCTG 
GTAAAGGTGA TCACTTCTTG CTCCAGCACT GACTACAAGG GGGATGATTT TAAGGCCCTT 
GTTTTGCAAT TCATGCCTAA TGGTAATTTG GAGATGAGTT TATACCCGGA AGATTTTGAG 
TCAGGATCTT CTCTAACCTT GTTGCAAAGG TTAAACATTG CCATTGATGT TGCATCTGCC 
ATGGACTACT TGCACCATGA CTGTGACCCA CCAATAGTCC ATTGTGATCT GAAACCTGTC 
AATGTTCTAC TAGATGAAGA TATGGTTGCA CATGTAGCAG ATTTTGGATT GGCAAGGTTT 
CTCTCTCAAA ATCCATCAGA GAAACATAAC AGCACCCTAG AACTGAAGGG ATCAATCGGC 
TATATCGCCC CAGAATATGG TTTAGGAGGC AAGGCTTCAA CTAGTGGTGA TGTGTACAGT 
TTTGGGATCT TACTACTAGA GATGTTGATA GCTGAAAAAC CAACAAACGA AATGTTCAAA 
GAAGAAGTAA GCATGAACAG ATTTGTATCA GACATGGATG ACAAGCAATT ACTAAAGGTT 
GTTGATCAAA GGCTTATTAA CCAATACGAA TATTCGACAC AAATTTCAAG CAGTGATAGT 
CATAGTGGTG AGTCTGGCAG CATCAGCTAT AGTGATGGTA GTAACGCACA TTGGATGCAC 
AAAGCTGAGG AGTGCATAGC TACTACTATG AGAGTTGGCT TGTCATGTAT AGCCCATCAT 
CCCAAAGATC GGTGTACCAT GAGAGAAGCC TTATCAAAAT TGCATGGAAT TAAGCAGTCT 
ATACTAGGCT TGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_003602344.1
CDS	1..3135
Translation	MTSSFPTTTKTKVQRHHLADIKYQTRISVLLLPTTLSYTTINMIQIRLILLLCFLLSHFHVIICNNNTDKDILLSFKLQVTDPNNALSSWKQDSNHCTWYGVNCSKVDERVQSLTLRGLGLSGKLPSNLSNLTYLHSLDLSNNTFHGQIPFQFSHLSLLNVIQLAMNDLNGTLPPQLGQLHNLQSLDFSVNNLTGKIPSTFGNLLSLKNLSMARNMLEGEIPSELGNLHNLSRLQLSENNFTGKLPTSIFNLSSLVFLSLTQNNLSGELPQNFGEAFPNIGTLALATNRFEGVIPSSISNSSHLQIIDLSNNRFHGPMPLFNNLKNLTHLTLGKNYLTSNTSLNFQFFESLRNSTQLQILMINDNNLTGELPSSVDYLSSNLQQFCVANNQLNGSIPHGMKKFQNLISFSFEQNYFTGELPLELGTLKKLERLLIYQNRLSGEIPDIFGNFTNLFILAIGNNQFSGRIHASIGRCKRLSFLDLRMNKLAGVIPMEIFQLSGLTTLYLHGNSLNGSLPPQFKMEQLEAMVVSDNKLSGNIPKIEVNGLKTLMMARNNFSGSIPNSLGDLPSLVTLDLSSNSLTGPIPESLEKLKYMVKLNLSFNKLEGEVPMEGIFMNLSQVDLQGNNKLCGLNNQVMHKLGVTLCVAGKKNKRNILLPIILAIIGAAVLFASMIYLFWLLMSLKKKHKAEKTSLSSTTIKGLHQNISYGDIRLATNNFSAANMVGKGGFGSVYKGVFNISSYENQTTTLAVKVLDLQQSKASQSFSAECEALKNVRHRNLVKVITSCSSTDYKGDDFKALVLQFMPNGNLEMSLYPEDFESGSSLTLLQRLNIAIDVASAMDYLHHDCDPPIVHCDLKPVNVLLDEDMVAHVADFGLARFLSQNPSEKHNSTLELKGSIGYIAPEYGLGGKASTSGDVYSFGILLLEMLIAEKPTNEMFKEEVSMNRFVSDMDDKQLLKVVDQRLINQYEYSTQISSSDSHSGESGSISYSDGSNAHWMHKAEECIATTMRVGLSCIAHHPKDRCTMREALSKLHGIKQSILGL

Target ORF information:

RefSeq Version	XM_003602296.2
Organism	Medicago truncatula(barrel medic)
Definition	Medicago truncatula LRR receptor-like kinase family protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_003602296.2

ORF Insert Sequence:

ATGACCAGTT CTTTTCCTAC TACTACTAAA ACCAAAGTCC AAAGGCACCA TTTAGCAGAC 
ATCAAATATC AAACAAGGAT TTCAGTCCTA CTACTACCAA CCACATTGAG CTATACTACT 
ATCAATATGA TCCAAATACG ACTTATTTTG CTCCTATGTT TCCTACTTTC TCATTTCCAT 
GTCATCATTT GCAACAATAA CACAGACAAA GATATTCTTC TATCATTCAA ATTACAAGTA 
ACTGATCCAA ACAATGCCTT GTCCAGTTGG AAACAAGATT CTAATCATTG TACCTGGTAT 
GGTGTCAACT GTTCCAAAGT TGATGAAAGA GTTCAATCTC TAACCTTACG GGGACTTGGC 
CTCTCTGGTA AACTACCCTC TAACCTCTCC AACCTCACTT ACCTTCATTC ACTTGACCTT 
TCCAATAACA CTTTTCATGG CCAAATTCCA TTCCAATTTT CTCATCTCTC ACTCCTCAAT 
GTCATTCAAT TAGCTATGAA CGATCTCAAT GGCACACTTC CACCACAATT GGGTCAACTC 
CATAATCTAC AAAGTTTAGA CTTTTCTGTC AATAATCTCA CTGGTAAAAT TCCTTCAACC 
TTTGGCAATC TCTTATCTCT CAAGAATCTT TCCATGGCAA GGAACATGCT TGAGGGTGAA 
ATTCCAAGTG AATTGGGCAA TCTCCACAAT CTTTCAAGAC TTCAACTCTC AGAGAATAAC 
TTCACCGGCA AGCTTCCTAC TTCTATCTTC AACTTATCTT CCTTAGTTTT CTTATCCCTC 
ACACAGAACA ATCTATCAGG CGAGTTGCCA CAAAATTTCG GCGAAGCTTT TCCGAATATA 
GGGACACTTG CTTTGGCAAC CAATAGATTT GAAGGGGTAA TTCCTAGTTC CATATCCAAT 
TCATCACATC TTCAAATTAT TGATCTTTCT AACAATAGGT TTCATGGGCC AATGCCTCTT 
TTCAACAACT TGAAAAACCT CACTCATTTG ACTCTTGGTA AAAACTATCT CACTTCCAAC 
ACATCATTGA ATTTTCAGTT CTTTGAATCC CTTCGAAACT CAACTCAGTT GCAGATTCTT 
ATGATCAATG ATAACAACTT GACCGGGGAA CTTCCAAGTT CGGTTGATTA TCTTTCAAGC 
AATCTACAAC AGTTTTGTGT TGCTAATAAT CAGCTAAATG GAAGCATTCC TCATGGAATG 
AAGAAGTTTC AAAATCTCAT ATCCTTCTCT TTTGAACAGA ATTATTTCAC AGGAGAGTTA 
CCATTAGAAT TAGGAACACT CAAGAAATTG GAGAGGCTAT TGATATACCA AAATAGATTG 
TCTGGTGAAA TTCCAGATAT ATTTGGAAAT TTTACAAATC TGTTTATTCT AGCAATAGGA 
AACAACCAGT TCTCAGGTAG AATTCATGCA AGTATCGGAC GATGCAAGAG ATTGAGTTTT 
CTGGACTTGC GAATGAATAA GCTTGCTGGT GTCATACCCA TGGAGATTTT TCAACTCTCT 
GGCTTGACAA CTTTATACTT ACATGGAAAT TCTCTGAACG GTTCGCTTCC TCCTCAATTC 
AAAATGGAGC AGCTAGAGGC CATGGTTGTT TCGGACAACA AGCTGTCAGG GAACATTCCT 
AAAATCGAAG TTAACGGATT GAAAACACTT ATGATGGCAA GAAACAATTT TAGTGGCTCA 
ATTCCAAATA GTCTAGGGGA TTTGCCATCC CTTGTGACTT TAGATCTATC ATCAAACAGT 
CTCACTGGTC CAATCCCTGA GAGTTTAGAA AAGCTCAAGT ATATGGTGAA ATTAAATTTG 
TCCTTCAACA AATTGGAAGG GGAAGTTCCT ATGGAAGGTA TTTTTATGAA CCTAAGCCAG 
GTTGATCTCC AAGGTAACAA CAAACTATGT GGCCTTAACA ATCAAGTTAT GCACAAGTTA 
GGAGTCACTT TGTGTGTTGC AGGTAAGAAA AACAAGAGAA ACATTTTACT ACCTATCATA 
CTAGCGATTA TAGGTGCGGC TGTTTTGTTT GCTTCAATGA TCTATCTATT TTGGCTGCTA 
ATGTCCTTAA AGAAGAAACA CAAGGCAGAG AAAACAAGTT TGTCATCAAC TACTATAAAA 
GGGTTGCATC AAAATATATC CTATGGTGAT ATTAGGCTTG CTACGAACAA TTTTTCAGCT 
GCAAATATGG TTGGAAAAGG AGGCTTTGGA TCTGTTTACA AGGGTGTGTT CAACATCAGC 
AGTTATGAAA ATCAAACCAC CACACTTGCT GTTAAAGTTC TTGACCTGCA ACAAAGCAAA 
GCCTCTCAGA GTTTTAGTGC AGAATGTGAA GCTTTGAAAA ATGTTAGGCA TCGGAATCTG 
GTAAAGGTGA TCACTTCTTG CTCCAGCACT GACTACAAGG GGGATGATTT TAAGGCCCTT 
GTTTTGCAAT TCATGCCTAA TGGTAATTTG GAGATGAGTT TATACCCGGA AGATTTTGAG 
TCAGGATCTT CTCTAACCTT GTTGCAAAGG TTAAACATTG CCATTGATGT TGCATCTGCC 
ATGGACTACT TGCACCATGA CTGTGACCCA CCAATAGTCC ATTGTGATCT GAAACCTGTC 
AATGTTCTAC TAGATGAAGA TATGGTTGCA CATGTAGCAG ATTTTGGATT GGCAAGGTTT 
CTCTCTCAAA ATCCATCAGA GAAACATAAC AGCACCCTAG AACTGAAGGG ATCAATCGGC 
TATATCGCCC CAGAATATGG TTTAGGAGGC AAGGCTTCAA CTAGTGGTGA TGTGTACAGT 
TTTGGGATCT TACTACTAGA GATGTTGATA GCTGAAAAAC CAACAAACGA AATGTTCAAA 
GAAGAAGTAA GCATGAACAG ATTTGTATCA GACATGGATG ACAAGCAATT ACTAAAGGTT 
GTTGATCAAA GGCTTATTAA CCAATACGAA TATTCGACAC AAATTTCAAG CAGTGATAGT 
CATAGTGGTG AGTCTGGCAG CATCAGCTAT AGTGATGGTA GTAACGCACA TTGGATGCAC 
AAAGCTGAGG AGTGCATAGC TACTACTATG AGAGTTGGCT TGTCATGTAT AGCCCATCAT 
CCCAAAGATC GGTGTACCAT GAGAGAAGCC TTATCAAAAT TGCATGGAAT TAAGCAGTCT 
ATACTAGGCT TGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC11428205 ( XM_003602296.3 ) cDNA ORF clone, Medicago truncatula(barrel medic) -> XP_003602344.1 Medicago truncatula probable LRR receptor-like serine/threonine-protein kinase At3g47570 (LOC11428205), mRNA.

Price & Availability↑

CloneID	OMe199957
Clone ID Related Accession (Same CDS sequence)	XM_003602296.2 , XM_003602296.3
Accession Version	XM_003602296.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3135bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-04-22
Organism	Medicago truncatula(barrel medic)
Product	probable LRR receptor-like serine/threonine-protein kinase At3g47570
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_016409.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2018 this sequence version replaced XM_003602296.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Medicago truncatula Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACCAGTT CTTTTCCTAC TACTACTAAA ACCAAAGTCC AAAGGCACCA TTTAGCAGAC 
ATCAAATATC AAACAAGGAT TTCAGTCCTA CTACTACCAA CCACATTGAG CTATACTACT 
ATCAATATGA TCCAAATACG ACTTATTTTG CTCCTATGTT TCCTACTTTC TCATTTCCAT 
GTCATCATTT GCAACAATAA CACAGACAAA GATATTCTTC TATCATTCAA ATTACAAGTA 
ACTGATCCAA ACAATGCCTT GTCCAGTTGG AAACAAGATT CTAATCATTG TACCTGGTAT 
GGTGTCAACT GTTCCAAAGT TGATGAAAGA GTTCAATCTC TAACCTTACG GGGACTTGGC 
CTCTCTGGTA AACTACCCTC TAACCTCTCC AACCTCACTT ACCTTCATTC ACTTGACCTT 
TCCAATAACA CTTTTCATGG CCAAATTCCA TTCCAATTTT CTCATCTCTC ACTCCTCAAT 
GTCATTCAAT TAGCTATGAA CGATCTCAAT GGCACACTTC CACCACAATT GGGTCAACTC 
CATAATCTAC AAAGTTTAGA CTTTTCTGTC AATAATCTCA CTGGTAAAAT TCCTTCAACC 
TTTGGCAATC TCTTATCTCT CAAGAATCTT TCCATGGCAA GGAACATGCT TGAGGGTGAA 
ATTCCAAGTG AATTGGGCAA TCTCCACAAT CTTTCAAGAC TTCAACTCTC AGAGAATAAC 
TTCACCGGCA AGCTTCCTAC TTCTATCTTC AACTTATCTT CCTTAGTTTT CTTATCCCTC 
ACACAGAACA ATCTATCAGG CGAGTTGCCA CAAAATTTCG GCGAAGCTTT TCCGAATATA 
GGGACACTTG CTTTGGCAAC CAATAGATTT GAAGGGGTAA TTCCTAGTTC CATATCCAAT 
TCATCACATC TTCAAATTAT TGATCTTTCT AACAATAGGT TTCATGGGCC AATGCCTCTT 
TTCAACAACT TGAAAAACCT CACTCATTTG ACTCTTGGTA AAAACTATCT CACTTCCAAC 
ACATCATTGA ATTTTCAGTT CTTTGAATCC CTTCGAAACT CAACTCAGTT GCAGATTCTT 
ATGATCAATG ATAACAACTT GACCGGGGAA CTTCCAAGTT CGGTTGATTA TCTTTCAAGC 
AATCTACAAC AGTTTTGTGT TGCTAATAAT CAGCTAAATG GAAGCATTCC TCATGGAATG 
AAGAAGTTTC AAAATCTCAT ATCCTTCTCT TTTGAACAGA ATTATTTCAC AGGAGAGTTA 
CCATTAGAAT TAGGAACACT CAAGAAATTG GAGAGGCTAT TGATATACCA AAATAGATTG 
TCTGGTGAAA TTCCAGATAT ATTTGGAAAT TTTACAAATC TGTTTATTCT AGCAATAGGA 
AACAACCAGT TCTCAGGTAG AATTCATGCA AGTATCGGAC GATGCAAGAG ATTGAGTTTT 
CTGGACTTGC GAATGAATAA GCTTGCTGGT GTCATACCCA TGGAGATTTT TCAACTCTCT 
GGCTTGACAA CTTTATACTT ACATGGAAAT TCTCTGAACG GTTCGCTTCC TCCTCAATTC 
AAAATGGAGC AGCTAGAGGC CATGGTTGTT TCGGACAACA AGCTGTCAGG GAACATTCCT 
AAAATCGAAG TTAACGGATT GAAAACACTT ATGATGGCAA GAAACAATTT TAGTGGCTCA 
ATTCCAAATA GTCTAGGGGA TTTGCCATCC CTTGTGACTT TAGATCTATC ATCAAACAGT 
CTCACTGGTC CAATCCCTGA GAGTTTAGAA AAGCTCAAGT ATATGGTGAA ATTAAATTTG 
TCCTTCAACA AATTGGAAGG GGAAGTTCCT ATGGAAGGTA TTTTTATGAA CCTAAGCCAG 
GTTGATCTCC AAGGTAACAA CAAACTATGT GGCCTTAACA ATCAAGTTAT GCACAAGTTA 
GGAGTCACTT TGTGTGTTGC AGGTAAGAAA AACAAGAGAA ACATTTTACT ACCTATCATA 
CTAGCGATTA TAGGTGCGGC TGTTTTGTTT GCTTCAATGA TCTATCTATT TTGGCTGCTA 
ATGTCCTTAA AGAAGAAACA CAAGGCAGAG AAAACAAGTT TGTCATCAAC TACTATAAAA 
GGGTTGCATC AAAATATATC CTATGGTGAT ATTAGGCTTG CTACGAACAA TTTTTCAGCT 
GCAAATATGG TTGGAAAAGG AGGCTTTGGA TCTGTTTACA AGGGTGTGTT CAACATCAGC 
AGTTATGAAA ATCAAACCAC CACACTTGCT GTTAAAGTTC TTGACCTGCA ACAAAGCAAA 
GCCTCTCAGA GTTTTAGTGC AGAATGTGAA GCTTTGAAAA ATGTTAGGCA TCGGAATCTG 
GTAAAGGTGA TCACTTCTTG CTCCAGCACT GACTACAAGG GGGATGATTT TAAGGCCCTT 
GTTTTGCAAT TCATGCCTAA TGGTAATTTG GAGATGAGTT TATACCCGGA AGATTTTGAG 
TCAGGATCTT CTCTAACCTT GTTGCAAAGG TTAAACATTG CCATTGATGT TGCATCTGCC 
ATGGACTACT TGCACCATGA CTGTGACCCA CCAATAGTCC ATTGTGATCT GAAACCTGTC 
AATGTTCTAC TAGATGAAGA TATGGTTGCA CATGTAGCAG ATTTTGGATT GGCAAGGTTT 
CTCTCTCAAA ATCCATCAGA GAAACATAAC AGCACCCTAG AACTGAAGGG ATCAATCGGC 
TATATCGCCC CAGAATATGG TTTAGGAGGC AAGGCTTCAA CTAGTGGTGA TGTGTACAGT 
TTTGGGATCT TACTACTAGA GATGTTGATA GCTGAAAAAC CAACAAACGA AATGTTCAAA 
GAAGAAGTAA GCATGAACAG ATTTGTATCA GACATGGATG ACAAGCAATT ACTAAAGGTT 
GTTGATCAAA GGCTTATTAA CCAATACGAA TATTCGACAC AAATTTCAAG CAGTGATAGT 
CATAGTGGTG AGTCTGGCAG CATCAGCTAT AGTGATGGTA GTAACGCACA TTGGATGCAC 
AAAGCTGAGG AGTGCATAGC TACTACTATG AGAGTTGGCT TGTCATGTAT AGCCCATCAT 
CCCAAAGATC GGTGTACCAT GAGAGAAGCC TTATCAAAAT TGCATGGAAT TAAGCAGTCT 
ATACTAGGCT TGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_003602344.1
CDS	16..3150
Translation	MTSSFPTTTKTKVQRHHLADIKYQTRISVLLLPTTLSYTTINMIQIRLILLLCFLLSHFHVIICNNNTDKDILLSFKLQVTDPNNALSSWKQDSNHCTWYGVNCSKVDERVQSLTLRGLGLSGKLPSNLSNLTYLHSLDLSNNTFHGQIPFQFSHLSLLNVIQLAMNDLNGTLPPQLGQLHNLQSLDFSVNNLTGKIPSTFGNLLSLKNLSMARNMLEGEIPSELGNLHNLSRLQLSENNFTGKLPTSIFNLSSLVFLSLTQNNLSGELPQNFGEAFPNIGTLALATNRFEGVIPSSISNSSHLQIIDLSNNRFHGPMPLFNNLKNLTHLTLGKNYLTSNTSLNFQFFESLRNSTQLQILMINDNNLTGELPSSVDYLSSNLQQFCVANNQLNGSIPHGMKKFQNLISFSFEQNYFTGELPLELGTLKKLERLLIYQNRLSGEIPDIFGNFTNLFILAIGNNQFSGRIHASIGRCKRLSFLDLRMNKLAGVIPMEIFQLSGLTTLYLHGNSLNGSLPPQFKMEQLEAMVVSDNKLSGNIPKIEVNGLKTLMMARNNFSGSIPNSLGDLPSLVTLDLSSNSLTGPIPESLEKLKYMVKLNLSFNKLEGEVPMEGIFMNLSQVDLQGNNKLCGLNNQVMHKLGVTLCVAGKKNKRNILLPIILAIIGAAVLFASMIYLFWLLMSLKKKHKAEKTSLSSTTIKGLHQNISYGDIRLATNNFSAANMVGKGGFGSVYKGVFNISSYENQTTTLAVKVLDLQQSKASQSFSAECEALKNVRHRNLVKVITSCSSTDYKGDDFKALVLQFMPNGNLEMSLYPEDFESGSSLTLLQRLNIAIDVASAMDYLHHDCDPPIVHCDLKPVNVLLDEDMVAHVADFGLARFLSQNPSEKHNSTLELKGSIGYIAPEYGLGGKASTSGDVYSFGILLLEMLIAEKPTNEMFKEEVSMNRFVSDMDDKQLLKVVDQRLINQYEYSTQISSSDSHSGESGSISYSDGSNAHWMHKAEECIATTMRVGLSCIAHHPKDRCTMREALSKLHGIKQSILGL

Target ORF information:

RefSeq Version	XM_003602296.3
Organism	Medicago truncatula(barrel medic)
Definition	Medicago truncatula probable LRR receptor-like serine/threonine-protein kinase At3g47570 (LOC11428205), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_003602296.3

ORF Insert Sequence:

ATGACCAGTT CTTTTCCTAC TACTACTAAA ACCAAAGTCC AAAGGCACCA TTTAGCAGAC 
ATCAAATATC AAACAAGGAT TTCAGTCCTA CTACTACCAA CCACATTGAG CTATACTACT 
ATCAATATGA TCCAAATACG ACTTATTTTG CTCCTATGTT TCCTACTTTC TCATTTCCAT 
GTCATCATTT GCAACAATAA CACAGACAAA GATATTCTTC TATCATTCAA ATTACAAGTA 
ACTGATCCAA ACAATGCCTT GTCCAGTTGG AAACAAGATT CTAATCATTG TACCTGGTAT 
GGTGTCAACT GTTCCAAAGT TGATGAAAGA GTTCAATCTC TAACCTTACG GGGACTTGGC 
CTCTCTGGTA AACTACCCTC TAACCTCTCC AACCTCACTT ACCTTCATTC ACTTGACCTT 
TCCAATAACA CTTTTCATGG CCAAATTCCA TTCCAATTTT CTCATCTCTC ACTCCTCAAT 
GTCATTCAAT TAGCTATGAA CGATCTCAAT GGCACACTTC CACCACAATT GGGTCAACTC 
CATAATCTAC AAAGTTTAGA CTTTTCTGTC AATAATCTCA CTGGTAAAAT TCCTTCAACC 
TTTGGCAATC TCTTATCTCT CAAGAATCTT TCCATGGCAA GGAACATGCT TGAGGGTGAA 
ATTCCAAGTG AATTGGGCAA TCTCCACAAT CTTTCAAGAC TTCAACTCTC AGAGAATAAC 
TTCACCGGCA AGCTTCCTAC TTCTATCTTC AACTTATCTT CCTTAGTTTT CTTATCCCTC 
ACACAGAACA ATCTATCAGG CGAGTTGCCA CAAAATTTCG GCGAAGCTTT TCCGAATATA 
GGGACACTTG CTTTGGCAAC CAATAGATTT GAAGGGGTAA TTCCTAGTTC CATATCCAAT 
TCATCACATC TTCAAATTAT TGATCTTTCT AACAATAGGT TTCATGGGCC AATGCCTCTT 
TTCAACAACT TGAAAAACCT CACTCATTTG ACTCTTGGTA AAAACTATCT CACTTCCAAC 
ACATCATTGA ATTTTCAGTT CTTTGAATCC CTTCGAAACT CAACTCAGTT GCAGATTCTT 
ATGATCAATG ATAACAACTT GACCGGGGAA CTTCCAAGTT CGGTTGATTA TCTTTCAAGC 
AATCTACAAC AGTTTTGTGT TGCTAATAAT CAGCTAAATG GAAGCATTCC TCATGGAATG 
AAGAAGTTTC AAAATCTCAT ATCCTTCTCT TTTGAACAGA ATTATTTCAC AGGAGAGTTA 
CCATTAGAAT TAGGAACACT CAAGAAATTG GAGAGGCTAT TGATATACCA AAATAGATTG 
TCTGGTGAAA TTCCAGATAT ATTTGGAAAT TTTACAAATC TGTTTATTCT AGCAATAGGA 
AACAACCAGT TCTCAGGTAG AATTCATGCA AGTATCGGAC GATGCAAGAG ATTGAGTTTT 
CTGGACTTGC GAATGAATAA GCTTGCTGGT GTCATACCCA TGGAGATTTT TCAACTCTCT 
GGCTTGACAA CTTTATACTT ACATGGAAAT TCTCTGAACG GTTCGCTTCC TCCTCAATTC 
AAAATGGAGC AGCTAGAGGC CATGGTTGTT TCGGACAACA AGCTGTCAGG GAACATTCCT 
AAAATCGAAG TTAACGGATT GAAAACACTT ATGATGGCAA GAAACAATTT TAGTGGCTCA 
ATTCCAAATA GTCTAGGGGA TTTGCCATCC CTTGTGACTT TAGATCTATC ATCAAACAGT 
CTCACTGGTC CAATCCCTGA GAGTTTAGAA AAGCTCAAGT ATATGGTGAA ATTAAATTTG 
TCCTTCAACA AATTGGAAGG GGAAGTTCCT ATGGAAGGTA TTTTTATGAA CCTAAGCCAG 
GTTGATCTCC AAGGTAACAA CAAACTATGT GGCCTTAACA ATCAAGTTAT GCACAAGTTA 
GGAGTCACTT TGTGTGTTGC AGGTAAGAAA AACAAGAGAA ACATTTTACT ACCTATCATA 
CTAGCGATTA TAGGTGCGGC TGTTTTGTTT GCTTCAATGA TCTATCTATT TTGGCTGCTA 
ATGTCCTTAA AGAAGAAACA CAAGGCAGAG AAAACAAGTT TGTCATCAAC TACTATAAAA 
GGGTTGCATC AAAATATATC CTATGGTGAT ATTAGGCTTG CTACGAACAA TTTTTCAGCT 
GCAAATATGG TTGGAAAAGG AGGCTTTGGA TCTGTTTACA AGGGTGTGTT CAACATCAGC 
AGTTATGAAA ATCAAACCAC CACACTTGCT GTTAAAGTTC TTGACCTGCA ACAAAGCAAA 
GCCTCTCAGA GTTTTAGTGC AGAATGTGAA GCTTTGAAAA ATGTTAGGCA TCGGAATCTG 
GTAAAGGTGA TCACTTCTTG CTCCAGCACT GACTACAAGG GGGATGATTT TAAGGCCCTT 
GTTTTGCAAT TCATGCCTAA TGGTAATTTG GAGATGAGTT TATACCCGGA AGATTTTGAG 
TCAGGATCTT CTCTAACCTT GTTGCAAAGG TTAAACATTG CCATTGATGT TGCATCTGCC 
ATGGACTACT TGCACCATGA CTGTGACCCA CCAATAGTCC ATTGTGATCT GAAACCTGTC 
AATGTTCTAC TAGATGAAGA TATGGTTGCA CATGTAGCAG ATTTTGGATT GGCAAGGTTT 
CTCTCTCAAA ATCCATCAGA GAAACATAAC AGCACCCTAG AACTGAAGGG ATCAATCGGC 
TATATCGCCC CAGAATATGG TTTAGGAGGC AAGGCTTCAA CTAGTGGTGA TGTGTACAGT 
TTTGGGATCT TACTACTAGA GATGTTGATA GCTGAAAAAC CAACAAACGA AATGTTCAAA 
GAAGAAGTAA GCATGAACAG ATTTGTATCA GACATGGATG ACAAGCAATT ACTAAAGGTT 
GTTGATCAAA GGCTTATTAA CCAATACGAA TATTCGACAC AAATTTCAAG CAGTGATAGT 
CATAGTGGTG AGTCTGGCAG CATCAGCTAT AGTGATGGTA GTAACGCACA TTGGATGCAC 
AAAGCTGAGG AGTGCATAGC TACTACTATG AGAGTTGGCT TGTCATGTAT AGCCCATCAT 
CCCAAAGATC GGTGTACCAT GAGAGAAGCC TTATCAAAAT TGCATGGAAT TAAGCAGTCT 
ATACTAGGCT TGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

An improved genome release (version Mt4.0) for the model legume Medicago truncatula.
BMC genomics15312(2014 Apr)
Tang H,Krishnakumar V,Bidwell S,Rosen B,Chan A,Zhou S,Gentzbittel L,Childs KL,Yandell M,Gundlach H,Mayer KF,Schwartz DC,Town CD

The Medicago genome provides insight into the evolution of rhizobial symbioses.
Nature480(7378)520-4(2011 Nov)
Young ND,Debell? F,Oldroyd GE,Geurts R,Cannon SB,Udvardi MK,Benedito VA,Mayer KF,Gouzy J,Schoof H,Van de Peer Y,Proost S,Cook DR,Meyers BC,Spannagl M,Cheung F,De Mita S,Krishnakumar V,Gundlach H,Zhou S,Mudge J,Bharti AK,Murray JD,Naoumkina MA,Rosen B,Silverstein KA,Tang H,Rombauts S,Zhao PX,Zhou P,Barbe V,Bardou P,Bechner M,Bellec A,Berger A,Berg?s H,Bidwell S,Bisseling T,Choisne N,Couloux A,Denny R,Deshpande S,Dai X,Doyle JJ,Dudez AM,Farmer AD,Fouteau S,Franken C,Gibelin C,Gish J,Goldstein S,Gonz?lez AJ,Green PJ,Hallab A,Hartog M,Hua A,Humphray SJ,Jeong DH,Jing Y,J?cker A,Kenton SM,Kim DJ,Klee K,Lai H,Lang C,Lin S,Macmil SL,Magdelenat G,Matthews L,McCorrison J,Monaghan EL,Mun JH,Najar FZ,Nicholson C,Noirot C,O'Bleness M,Paule CR,Poulain J,Prion F,Qin B,Qu C,Retzel EF,Riddle C,Sallet E,Samain S,Samson N,Sanders I,Saurat O,Scarpelli C,Schiex T,Segurens B,Severin AJ,Sherrier DJ,Shi R,Sims S,Singer SR,Sinharoy S,Sterck L,Viollet A,Wang BB,Wang K,Wang M,Wang X,Warfsmann J,Weissenbach J,White DD,White JD,Wiley GB,Wincker P,Xing Y,Yang L,Yao Z,Ying F,Zhai J,Zhou L,Zuber A,D?nari? J,Dixon RA,May GD,Schwartz DC,Rogers J,Qu?tier F,Town CD,Roe BA

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LOC11428205 cDNA ORF clone, Medicago truncatula(barrel medic)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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