LOC110604648 cDNA ORF clone, Manihot esculenta(cassava)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC110604648
Entrez Gene ID	110604648
Full Name	agamous-like MADS-box protein AGL1
Gene Type	protein-coding
Organism	Manihot esculenta(cassava)

mRNA and Protein(s)

mRNA	Protein	Name
XM_021742911.1	XP_021598603.1	agamous-like MADS-box protein AGL1

Pathways from BioSystems
Gene Ontology

The following LOC110604648 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC110604648 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OMa317916	XM_021742911.1 Latest version!	Manihot esculenta agamous-like MADS-box protein AGL1 (LOC110604648), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC110604648 ( XM_021742911.1 ) cDNA ORF clone, Manihot esculenta(cassava) -> XP_021598603.1 Manihot esculenta agamous-like MADS-box protein AGL1 (LOC110604648), mRNA.

Price & Availability↑

CloneID	OMa317916
Clone ID Related Accession (Same CDS sequence)	XM_021742911.1
Accession Version	XM_021742911.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1323bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-07-15
Organism	Manihot esculenta(cassava)
Product	agamous-like MADS-box protein AGL1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_035162.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Manihot esculenta Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 39% of CDS bases ##RefSeq-Attributes-END##

ATGGCACGGA ATATTTTGGT AATTCCTATG TCAAAAGTTA CACCAGAGTT TGCTTTTAAC 
AATGGAGGGA GCGTGTTTGA TCATGAATGG AGTTCGCTGC GACCGACGAC TGTGCAAGCG 
TTGATATGCA CTCAAGATTG GCTGAGTGAA GAAGCAGAGT TATCACTTAC TCTGGTTGTA 
AAGGATGTAC TGATGGAAGA TGATAGTCCT TTTCAAGAAA AAGTAGGGTT ATTGGCTAAT 
GGAATACCAT GGGATGTGCT TTTTAGTTCG GCTGTTTGGT GGTTATGGAA GCGAAGAAAC 
TTGTTGGTTT TTAATGAGAA TAATGACCAG GATACTATTG ATGCGTCCTT TATTCAGCTT 
CGAGCAAAAG AATATATTCA TGCATGGAGG TTTTCGATGC AGGCTGGGTC TGGACCGAGA 
GGCCGGTCTT TGAAGTATGT TGGGTGGAAG CCGCCAGAAA CAGGCTGGGT GGTAGTGAAT 
TCCGATGGTA GTGCATTGTT GTCAGCAGGA AGGCCAAAAC CCACAAAGAG AGACTCAATT 
CAACAATTAC TTTCCATTCC TTCTTTGTTT CTTTACCAGA TTGCAACCAC GGAGTTCCCT 
AATCAAGAAC CGGATCAAGG CCCTTCCCTC AGAAAGACGG GAAGGGGCAA AATAGAAATC 
AAACGAATCG AAAACACTAC TAACAGGCAA GTCACCTTCT GCAAGCGTCG CAATGGATTG 
CTCAAGAAAG CTTATGAATT ATCCGTCCTC TGCGATGCTG AAGTTGCTCT CATAGTCTTC 
TCTAGCCGAG GCCGCCTCTA CGAGTATGCT AATAACAGTG TGAGAGCAAC AATTGATAGG 
TACAAGAAAG CCAGTGCAGA CTCCTCAAAC CCAGCATCTG CTTCTGAAGC TAACACTCAG 
TTCTACCAGC AAGAATCCTC CAAACTACGC AGGCAAATTC GTGAAATTCA AAATTTAAAT 
AGGCATATTC TGGGTGAGGC ACTGAGCACC TTGACCTTTA AGGAACTTAA GAACTTGGAA 
GGCAGATTGG AGAAAGGCAT CAGCAGAATT AGGTCCAAAA AGAATGAAAT GCTATTTGCT 
GAAATCGAGT ACATGCAGAA AAGGGAGATT GAGCTGCAAA ATGACAACAT GTACCTGCGA 
GCAAAGATAG CTGAAAATGA GAGAGCACAA CAGCAGCAGC AGCAAACGAG CCTAATGCCT 
GGAGGTTCTG TGTATGAATC AGTGCCTTCG CAGGCATATG ATCGGAACTT TATCCCCGTA 
AACCTCCTGG AACCAAACCA TCACTACTCT CGCCCAGACC ACACTGCTCT TCAACTTGTA 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_021598603.1
CDS	1..1323
Translation	MARNILVIPMSKVTPEFAFNNGGSVFDHEWSSLRPTTVQALICTQDWLSEEAELSLTLVVKDVLMEDDSPFQEKVGLLANGIPWDVLFSSAVWWLWKRRNLLVFNENNDQDTIDASFIQLRAKEYIHAWRFSMQAGSGPRGRSLKYVGWKPPETGWVVVNSDGSALLSAGRPKPTKRDSIQQLLSIPSLFLYQIATTEFPNQEPDQGPSLRKTGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKASADSSNPASASEANTQFYQQESSKLRRQIREIQNLNRHILGEALSTLTFKELKNLEGRLEKGISRIRSKKNEMLFAEIEYMQKREIELQNDNMYLRAKIAENERAQQQQQQTSLMPGGSVYESVPSQAYDRNFIPVNLLEPNHHYSRPDHTALQLV

Target ORF information:

RefSeq Version	XM_021742911.1
Organism	Manihot esculenta(cassava)
Definition	Manihot esculenta agamous-like MADS-box protein AGL1 (LOC110604648), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021742911.1

ORF Insert Sequence:

ATGGCACGGA ATATTTTGGT AATTCCTATG TCAAAAGTTA CACCAGAGTT TGCTTTTAAC 
AATGGAGGGA GCGTGTTTGA TCATGAATGG AGTTCGCTGC GACCGACGAC TGTGCAAGCG 
TTGATATGCA CTCAAGATTG GCTGAGTGAA GAAGCAGAGT TATCACTTAC TCTGGTTGTA 
AAGGATGTAC TGATGGAAGA TGATAGTCCT TTTCAAGAAA AAGTAGGGTT ATTGGCTAAT 
GGAATACCAT GGGATGTGCT TTTTAGTTCG GCTGTTTGGT GGTTATGGAA GCGAAGAAAC 
TTGTTGGTTT TTAATGAGAA TAATGACCAG GATACTATTG ATGCGTCCTT TATTCAGCTT 
CGAGCAAAAG AATATATTCA TGCATGGAGG TTTTCGATGC AGGCTGGGTC TGGACCGAGA 
GGCCGGTCTT TGAAGTATGT TGGGTGGAAG CCGCCAGAAA CAGGCTGGGT GGTAGTGAAT 
TCCGATGGTA GTGCATTGTT GTCAGCAGGA AGGCCAAAAC CCACAAAGAG AGACTCAATT 
CAACAATTAC TTTCCATTCC TTCTTTGTTT CTTTACCAGA TTGCAACCAC GGAGTTCCCT 
AATCAAGAAC CGGATCAAGG CCCTTCCCTC AGAAAGACGG GAAGGGGCAA AATAGAAATC 
AAACGAATCG AAAACACTAC TAACAGGCAA GTCACCTTCT GCAAGCGTCG CAATGGATTG 
CTCAAGAAAG CTTATGAATT ATCCGTCCTC TGCGATGCTG AAGTTGCTCT CATAGTCTTC 
TCTAGCCGAG GCCGCCTCTA CGAGTATGCT AATAACAGTG TGAGAGCAAC AATTGATAGG 
TACAAGAAAG CCAGTGCAGA CTCCTCAAAC CCAGCATCTG CTTCTGAAGC TAACACTCAG 
TTCTACCAGC AAGAATCCTC CAAACTACGC AGGCAAATTC GTGAAATTCA AAATTTAAAT 
AGGCATATTC TGGGTGAGGC ACTGAGCACC TTGACCTTTA AGGAACTTAA GAACTTGGAA 
GGCAGATTGG AGAAAGGCAT CAGCAGAATT AGGTCCAAAA AGAATGAAAT GCTATTTGCT 
GAAATCGAGT ACATGCAGAA AAGGGAGATT GAGCTGCAAA ATGACAACAT GTACCTGCGA 
GCAAAGATAG CTGAAAATGA GAGAGCACAA CAGCAGCAGC AGCAAACGAG CCTAATGCCT 
GGAGGTTCTG TGTATGAATC AGTGCCTTCG CAGGCATATG ATCGGAACTT TATCCCCGTA 
AACCTCCTGG AACCAAACCA TCACTACTCT CGCCCAGACC ACACTGCTCT TCAACTTGTA 
TAA