Gene Symbol | CCDC172 |
Entrez Gene ID | 699641 |
Full Name | coiled-coil domain containing 172 |
Synonyms | C10orf96,C9H10orf96 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » CCDC172 cDNA ORF clone
Gene Symbol | CCDC172 |
Entrez Gene ID | 699641 |
Full Name | coiled-coil domain containing 172 |
Synonyms | C10orf96,C9H10orf96 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
NM_001193986.1 | NP_001180915.1 | coiled-coil domain-containing protein 172 |
XM_015148163.1 | XP_015003649.1 | coiled-coil domain-containing protein 172 isoform X1 |
XM_015148165.1 | XP_015003651.1 | coiled-coil domain-containing protein 172 isoform X2 |
XM_015148163.2 | XP_015003649.1 | coiled-coil domain-containing protein 172 isoform X1 |
XM_028853350.1 | XP_028709183.1 | coiled-coil domain-containing protein 172 isoform X2 |
NM_001193986.2 | NP_001180915.1 | coiled-coil domain-containing protein 172 |
XM_015148164.1 | XP_015003650.1 | coiled-coil domain-containing protein 172 isoform X1 |
Bos taurus (cattle) | CCDC172 | NP_001069301.1 |
Mus musculus (house mouse) | Ccdc172 | NP_083648.1 |
Gallus gallus (chicken) | C10ORF96 | XP_001234639.1 |
Danio rerio (zebrafish) | ccdc172 | XP_001333493.2 |
Pan troglodytes (chimpanzee) | CCDC172 | XP_001150940.2 |
CCDC172 | XP_001093740.1 | |
Xenopus tropicalis (tropical clawed frog) | ccdc172 | XP_002942754.2 |
Canis lupus familiaris (dog) | CCDC172 | XP_853098.2 |
Rattus norvegicus (Norway rat) | Ccdc172 | NP_001014191.1 |
Homo sapiens (human) | CCDC172 | NP_940917.1 |
A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Mar?ais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB Jr
Biology direct9(1)20(2014 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following CCDC172 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CCDC172 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb02601 | |
Clone ID Related Accession (Same CDS sequence) | NM_001193986.1 , XM_015148163.1 , XM_015148164.1 | |
Accession Version | NM_001193986.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 777bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-27 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | coiled-coil domain-containing protein 172 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JSUE03044393.1 and JSUE03044395.1. On Aug 11, 2010 this sequence version replaced XM_001093740.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA4688341, SAMEA4688343 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGTTTGG AGTCCCTGTT TCAGCACATC ATCTTCACCG AGCATCAGGC GGAGGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001180915.1 |
CDS | 1..777 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001193986.1 |
1 | ATGAGTTTGG AGTCCCTGTT TCAGCACATC ATCTTCACCG AGCATCAGGC GGAGGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb02601 | |
Clone ID Related Accession (Same CDS sequence) | NM_001193986.1 , XM_015148163.1 , XM_015148164.1 | |
Accession Version | XM_015148163.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 777bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | coiled-coil domain-containing protein 172 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805198.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTTTGG AGTCCCTGTT TCAGCACATC ATCTTCACCG AGCATCAGGC GGAGGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015003649.1 |
CDS | 382..1158 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015148163.1 |
1 | ATGAGTTTGG AGTCCCTGTT TCAGCACATC ATCTTCACCG AGCATCAGGC GGAGGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb02601 | |
Clone ID Related Accession (Same CDS sequence) | NM_001193986.1 , XM_015148163.1 , XM_015148164.1 | |
Accession Version | XM_015148164.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 777bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | coiled-coil domain-containing protein 172 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805198.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTTTGG AGTCCCTGTT TCAGCACATC ATCTTCACCG AGCATCAGGC GGAGGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015003650.1 |
CDS | 113..889 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015148164.1 |
1 | ATGAGTTTGG AGTCCCTGTT TCAGCACATC ATCTTCACCG AGCATCAGGC GGAGGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb92055 | |
Clone ID Related Accession (Same CDS sequence) | XM_015148163.2 , NM_001193986.2 | |
Accession Version | NM_001193986.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 777bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-11 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | coiled-coil domain-containing protein 172 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from QNVO02000493.1. On Dec 12, 2019 this sequence version replaced NM_001193986.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA4688341, SAMEA4688343 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGTTTGG AGTCCCTGTT TCAGCACATC ATCTTCACCG AGCATCAGGC GGAGGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001180915.1 |
CDS | 1..777 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001193986.2 |
1 | ATGAGTTTGG AGTCCCTGTT TCAGCACATC ATCTTCACCG AGCATCAGGC GGAGGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb40197 | |
Clone ID Related Accession (Same CDS sequence) | XM_015148165.1 | |
Accession Version | XM_015148165.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 741bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | coiled-coil domain-containing protein 172 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805198.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTTTGG AGTCCCTGTT TCAGCACATC ATCTTCACCG AGCATCAGGC GGAGGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015003651.1 |
CDS | 588..1328 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015148165.1 |
1 | ATGAGTTTGG AGTCCCTGTT TCAGCACATC ATCTTCACCG AGCATCAGGC GGAGGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb92055 | |
Clone ID Related Accession (Same CDS sequence) | XM_015148163.2 , NM_001193986.2 | |
Accession Version | XM_015148163.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 777bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | coiled-coil domain-containing protein 172 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041762.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015148163.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTTTGG AGTCCCTGTT TCAGCACATC ATCTTCACCG AGCATCAGGC GGAGGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015003649.1 |
CDS | 376..1152 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015148163.2 |
1 | ATGAGTTTGG AGTCCCTGTT TCAGCACATC ATCTTCACCG AGCATCAGGC GGAGGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb92056 | |
Clone ID Related Accession (Same CDS sequence) | XM_028853350.1 | |
Accession Version | XM_028853350.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 741bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | coiled-coil domain-containing protein 172 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041762.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTTTGG AGTCCCTGTT TCAGCACATC ATCTTCACCG AGCATCAGGC GGAGGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028709183.1 |
CDS | 376..1116 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028853350.1 |
1 | ATGAGTTTGG AGTCCCTGTT TCAGCACATC ATCTTCACCG AGCATCAGGC GGAGGAGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A new rhesus macaque assembly and annotation for next-generation sequencing analyses. |