Gene Symbol | SMARCB1 |
Entrez Gene ID | 699190 |
Full Name | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » SMARCB1 cDNA ORF clone
Gene Symbol | SMARCB1 |
Entrez Gene ID | 699190 |
Full Name | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
XM_015149824.2 | XP_015005310.1 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1 |
XM_015149824.1 | XP_015005310.1 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1 |
NM_001257888.2 | NP_001244817.1 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 |
Bos taurus (cattle) | SMARCB1 | NP_001035647.1 |
Mus musculus (house mouse) | Smarcb1 | NP_035548.1 |
Rattus norvegicus (Norway rat) | Smarcb1 | NP_001020899.1 |
Drosophila melanogaster (fruit fly) | Snr1 | NP_730935.1 |
Canis lupus familiaris (dog) | SMARCB1 | XP_857270.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP001154 | XP_322006.1 |
Homo sapiens (human) | SMARCB1 | NP_003064.2 |
Pan troglodytes (chimpanzee) | SMARCB1 | XP_001169712.1 |
SMARCB1 | XP_001084732.1 | |
Xenopus tropicalis (tropical clawed frog) | smarcb1 | NP_001006819.1 |
Gallus gallus (chicken) | MMP11 | NP_001034344.1 |
Danio rerio (zebrafish) | smarcb1a | NP_001007297.1 |
Caenorhabditis elegans (roundworm) | snfc-5 | NP_497890.1 |
Comparative molecular genetic analysis of simian and human HIV-1 integrase interactor INI1/SMARCB1/SNF5.
Pyeon D, Price L, Park IW
Archives of virology160(12)3085-91(2015 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Macaca mulatta SMARCB1 showed 23 single nucleotide differences compared to the human ortholog and the amino acid sequence is 100% conserved between human and simian INI1.
Title: Comparative molecular genetic analysis of simian and human HIV-1 integrase interactor INI1/SMARCB1/SNF5.
The following SMARCB1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SMARCB1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb24126 | |
Clone ID Related Accession (Same CDS sequence) | NM_001257888.2 | |
Accession Version | NM_001257888.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1131bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-27 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JU336022.1. On Aug 31, 2012 this sequence version replaced NM_001257888.1. ##Evidence-Data-START## Transcript exon combination :: JU336022.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4688315, SAMEA4688316 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGATGATGA TGGCGCTGAG CAAGACCTTC GGGCAGAAGC CCGTGAAGTT CCAGCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001244817.1 |
CDS | 158..1288 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001257888.2 |
1 | ATGATGATGA TGGCGCTGAG CAAGACCTTC GGGCAGAAGC CCGTGAAGTT CCAGCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb41363 | |
Clone ID Related Accession (Same CDS sequence) | XM_015149824.1 | |
Accession Version | XM_015149824.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1158bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805245.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGATGA TGGCGCTGAG CAAGACCTTC GGGCAGAAGC CCGTGAAGTT CCAGCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015005310.1 |
CDS | 208..1365 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015149824.1 |
1 | ATGATGATGA TGGCGCTGAG CAAGACCTTC GGGCAGAAGC CCGTGAAGTT CCAGCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb61823 | |
Clone ID Related Accession (Same CDS sequence) | XM_015149824.2 | |
Accession Version | XM_015149824.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1158bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041763.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015149824.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGATGA TGGCGCTGAG CAAGACCTTC GGGCAGAAGC CCGTGAAGTT CCAGCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015005310.1 |
CDS | 235..1392 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015149824.2 |
1 | ATGATGATGA TGGCGCTGAG CAAGACCTTC GGGCAGAAGC CCGTGAAGTT CCAGCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Comparative molecular genetic analysis of simian and human HIV-1 integrase interactor INI1/SMARCB1/SNF5. |