Snr1 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Snr1
Entrez Gene ID	40657
Full Name	Snf5-related 1
Synonyms	BAP45,CG1064,Dmel\CG1064,SNR1,Snr,Snr-1,Snr1/BAP45,l(3)01319,snr,snr-1,snr1
General protein information	Preferred Names Snf5-related 1 Names CG1064 gene product from transcript CG1064-RA CG1064-PA Snr1-PA
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 83A4-83A4

mRNA and Protein(s)

mRNA	Protein	Name
NM_169055.3	NP_730935.1	Snf5-related 1

Pathways from BioSystems

Homologies

Bos taurus (cattle)	SMARCB1	NP_001035647.1
Mus musculus (house mouse)	Smarcb1	NP_035548.1
Rattus norvegicus (Norway rat)	Smarcb1	NP_001020899.1
Drosophila melanogaster (fruit fly)	Snr1	NP_730935.1
Canis lupus familiaris (dog)	SMARCB1	XP_857270.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP001154	XP_322006.1
Homo sapiens (human)	SMARCB1	NP_003064.2
Pan troglodytes (chimpanzee)	SMARCB1	XP_001169712.1
	SMARCB1	XP_001084732.1
Xenopus tropicalis (tropical clawed frog)	smarcb1	NP_001006819.1
Gallus gallus (chicken)	MMP11	NP_001034344.1
Danio rerio (zebrafish)	smarcb1a	NP_001007297.1
Caenorhabditis elegans (roundworm)	snfc-5	NP_497890.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

the cytoplasmic Snr1 may play a tumor suppressive role in Drosophila imaginal tissues.
Title: The SWI/SNF Complex Protein Snr1 Is a Tumor Suppressor in

This is the first instance of phosphorylation of SNR1 or any of its homologues and implicates the DYRK family of kinases with a role in chromatin remodelling.
Title: dDYRK2 and Minibrain interact with the chromatin remodelling factors SNR1 and TRX.

SNR1 helps mediate associations between the Brm complex and DmcycE/CDK2 both in vitro and in vivo.
Title: SNR1 (INI1/SNF5) mediates important cell growth functions of the Drosophila Brahma (SWI/SNF) chromatin remodeling complex.

SNR1 is essential for some, but not all Brm functions, and it likely serves as an optional subunit, directing Brm complex activity to specific gene loci or cellular processes.
Title: SNR1 is an essential subunit in a subset of Drosophila brm complexes, targeting specific functions during development.

our results support the view that SNR1, and specifically the repeat 2 region, has a critical role in mediating cell growth control functions of the metazoan SWI/SNF complexes.
Title: The Drosophila SNR1 (SNF5/INI1) subunit directs essential developmental functions of the Brahma chromatin remodeling complex.

The following Snr1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Snr1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa03933	NM_169055.3 Latest version!	Drosophila melanogaster Snf5-related 1 (Snr1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Snr1 ( NM_169055.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_730935.1 Drosophila melanogaster Snf5-related 1 (Snr1), mRNA.

Price & Availability↑

CloneID	OFa03933
Clone ID Related Accession (Same CDS sequence)	NM_169055.3
Accession Version	NM_169055.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1113bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	Snf5-related 1
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jul 15, 2014 this sequence version replaced NM_169055.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCACTGC AGACATACGG GGACAAGCCG GTGGCCTTCC AGCTGGAGGA GGGCGGCGAG 
TACTACTACG TGGGCTCGGA AGTGGGCAAC TACATGCGCC ACTTCCGCGG CATTCTGTAC 
AAGAAGTACC CGGGAATGAC CCGCATCGTC CTGTCCAACG AGGAGCGCAA GCGGCTGGCT 
GAGTCCGGCC TCAGCTCCCA CATCTTAGCC AGCTCTGTAT CGCTGCTCCG CGCCGTAGAG 
GTGGATGATA TCATGGCCGG CAACGATGAA AAGTATCGCG CCGTCTCCGT GAACACTTCC 
GATACGCCAG TGCCGCGGGA GAGCAAGTCA AAGAAGCAGC CACAGTATGT GCCCACGATG 
CCGAACTCCA GCCACCTGGA CGCAGTGCCA CAGGCCACGC CAATCAACCG AAACCGAGTG 
CACACGAAGA AGGTTCGCAC ATTCCCGATG TGTTTCGACG ACACGGATCC CACGGCTAGC 
CTGGAGAATG CGGCGCAGAA GGAGTGCCTG GTGCCCATTC GACTGGACAT GGAGCTAGAG 
GGTCAAAAGC TGCGCGACAC CTTCACGTGG AACAAGAACG AGAGCATGAT TACTCCGGAG 
CAGTTTGCCG AGGTGCTGTG CGACGACCTG GACCTCAATC CCCTGCCCTT TGTGCCGGCT 
ATTGCACAGG CCATCCGACA GCAGATCGAA GCCTTTCCCA ACGATCCCCC CATCCTCGAG 
GAGACCTGCG ACCAGCGGGT CATTGTTAAG CTGAACATTC ACGTGGGCAA CACCTCGCTC 
GTCGACCAGG TCGAGTGGGA CATGTCCGAG AAGAACAACA ACCCCGAGGA GTTTGCCATT 
AAACTCTGTG CGGAATTGGG ATTGGGAGGA GAGTTTGTTA CGGCCATTGC CTACAGCATT 
AGGGGTCAGC TATCGTGGCA CTGTCGAACG TACGCCTTCA GCGAGGCCCC TCTATCAACG 
ATTGATGTGC CCTTCCGGAA TCCCAGCGAC GCTGACGCAT GGGCGCCATT CCTAGAGACG 
CTTACCGACG CCGAAATGGA GAAGAAAATC CGCGACCAGG ACCGCAACAC GCGCAGAATG 
CGACGACTGG CCAATACCAC AACTGGTTGG TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_730935.1
CDS	134..1246
Translation	MALQTYGDKPVAFQLEEGGEYYYVGSEVGNYMRHFRGILYKKYPGMTRIVLSNEERKRLAESGLSSHILASSVSLLRAVEVDDIMAGNDEKYRAVSVNTSDTPVPRESKSKKQPQYVPTMPNSSHLDAVPQATPINRNRVHTKKVRTFPMCFDDTDPTASLENAAQKECLVPIRLDMELEGQKLRDTFTWNKNESMITPEQFAEVLCDDLDLNPLPFVPAIAQAIRQQIEAFPNDPPILEETCDQRVIVKLNIHVGNTSLVDQVEWDMSEKNNNPEEFAIKLCAELGLGGEFVTAIAYSIRGQLSWHCRTYAFSEAPLSTIDVPFRNPSDADAWAPFLETLTDAEMEKKIRDQDRNTRRMRRLANTTTGW

Target ORF information:

RefSeq Version	NM_169055.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster Snf5-related 1 (Snr1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_169055.3

ORF Insert Sequence:

ATGGCACTGC AGACATACGG GGACAAGCCG GTGGCCTTCC AGCTGGAGGA GGGCGGCGAG 
TACTACTACG TGGGCTCGGA AGTGGGCAAC TACATGCGCC ACTTCCGCGG CATTCTGTAC 
AAGAAGTACC CGGGAATGAC CCGCATCGTC CTGTCCAACG AGGAGCGCAA GCGGCTGGCT 
GAGTCCGGCC TCAGCTCCCA CATCTTAGCC AGCTCTGTAT CGCTGCTCCG CGCCGTAGAG 
GTGGATGATA TCATGGCCGG CAACGATGAA AAGTATCGCG CCGTCTCCGT GAACACTTCC 
GATACGCCAG TGCCGCGGGA GAGCAAGTCA AAGAAGCAGC CACAGTATGT GCCCACGATG 
CCGAACTCCA GCCACCTGGA CGCAGTGCCA CAGGCCACGC CAATCAACCG AAACCGAGTG 
CACACGAAGA AGGTTCGCAC ATTCCCGATG TGTTTCGACG ACACGGATCC CACGGCTAGC 
CTGGAGAATG CGGCGCAGAA GGAGTGCCTG GTGCCCATTC GACTGGACAT GGAGCTAGAG 
GGTCAAAAGC TGCGCGACAC CTTCACGTGG AACAAGAACG AGAGCATGAT TACTCCGGAG 
CAGTTTGCCG AGGTGCTGTG CGACGACCTG GACCTCAATC CCCTGCCCTT TGTGCCGGCT 
ATTGCACAGG CCATCCGACA GCAGATCGAA GCCTTTCCCA ACGATCCCCC CATCCTCGAG 
GAGACCTGCG ACCAGCGGGT CATTGTTAAG CTGAACATTC ACGTGGGCAA CACCTCGCTC 
GTCGACCAGG TCGAGTGGGA CATGTCCGAG AAGAACAACA ACCCCGAGGA GTTTGCCATT 
AAACTCTGTG CGGAATTGGG ATTGGGAGGA GAGTTTGTTA CGGCCATTGC CTACAGCATT 
AGGGGTCAGC TATCGTGGCA CTGTCGAACG TACGCCTTCA GCGAGGCCCC TCTATCAACG 
ATTGATGTGC CCTTCCGGAA TCCCAGCGAC GCTGACGCAT GGGCGCCATT CCTAGAGACG 
CTTACCGACG CCGAAATGGA GAAGAAAATC CGCGACCAGG ACCGCAACAC GCGCAGAATG 
CGACGACTGG CCAATACCAC AACTGGTTGG TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Snr1 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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