Cdr1 cDNA ORF clone, Ictidomys tridecemlineatus(thirteen-lined ground squirrel)

Gene
Clones
gRNAs

Summary

Gene Symbol	Cdr1
Entrez Gene ID	101978491
Full Name	cerebellar degeneration related protein 1
Gene Type	protein-coding
Organism	Ictidomys tridecemlineatus(thirteen-lined ground squirrel)

mRNA and Protein(s)

mRNA	Protein	Name
XM_013358532.1	XP_013213986.1	LOW QUALITY PROTEIN: cerebellar degeneration-related antigen 1
XM_013358532.2	XP_013213986.2	LOW QUALITY PROTEIN: cerebellar degeneration-related antigen 1

Pathways from BioSystems
Gene Ontology

The following Cdr1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Cdr1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OIc56284	XM_013358532.1 Latest version!	Ictidomys tridecemlineatus cerebellar degeneration-related protein 1, 34kDa (Cdr1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$258.30 $369.00
OIc78037	XM_013358532.2 Latest version!	Ictidomys tridecemlineatus cerebellar degeneration related protein 1 (Cdr1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Cdr1 ( XM_013358532.1 ) cDNA ORF clone, Ictidomys tridecemlineatus(thirteen-lined ground squirrel) -> XP_013213986.1 Ictidomys tridecemlineatus cerebellar degeneration-related protein 1, 34kDa (Cdr1), mRNA.

Price & Availability↑

CloneID	OIc56284
Clone ID Related Accession (Same CDS sequence)	XM_013358532.1
Accession Version	XM_013358532.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1023bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-08-11
Organism	Ictidomys tridecemlineatus(Thirteen-lined ground squirrel)
Product	LOW QUALITY PROTEIN: cerebellar degeneration-related antigen 1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004936513.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ictidomys tridecemlineatus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases frameshifts :: corrected 5 indels internal stop codons :: corrected 6 genomic stop codons ##RefSeq-Attributes-END##

ATGGCTTTGT TGGAAGACGT GGATTTCCTG GAAGACGTAG CTTTGTTGGA AGACGTAGGT 
TGGCTGGAAG ACGTGGATTG GCTGGAAGAC ATGGATTGGC TGGAAGACAT AGGTTGGCTG 
GAAGACGTGG ATTGGCTGGA AGACGTGGAT TGGCTGGAAG ACGTGGATTG GTTGGAAGAC 
GTGGATTTCC TGGAAGACGT GGATTTCCGG GAAGACAGGG ATTTCCTGGA AGACGTGGAT 
TTCCTGGAAG ACTTGGATTA GCTGGAAGCC GTGGATTTCC TGGAAGACGT GGATTAGCTG 
GAAGACATGG ATTTCCTGGA AGACGCGTAT TTCCTGGAAG ACGCAGATTT CCTGGAAGAC 
GGGGATTTCC TGGAAGACAT GGATTTCCTG GAAGATATGG ATTAGCTGGA AGACATGGAT 
ATTCCGGAAG CTATGGATTT TATGGAAGAC AAGGATTTTC TGGAAGATGT GGATAGGCTG 
GAAGACCTGG AGGTCAATTG GAAGACATGG ATCCTCTGGA AGACATGCTT TTTTGAAGAC 
ATGGATTTTC AGGAAGACCT TAATTGTCTG GAAGACCTGG ATTTTTTGGA AGACAGANTT 
TGCTGGAAGA CTCTGAGGTT ACTGGAAGAC ATGGATTTTC TGGAAGACAT GGATTTTCTG 
GAAGACATGG ATTTTCTGGA AGACATGGAT TTTCTGGAAG ACATGGATCT TCAGGAAGAC 
ATGGATCTTC AGGAAGACAT GGATCTTCAG GAAGACATAT ATTGGCTGGA AGACCTTGAC 
TTATTGGAAG ACATGAATTG TCCGGAAGAC ATAGCTTTAC TGGAAGACCT GGATTTAGTG 
GAAGAAACTG ATTTTGTCTG GAAGACACGG GTTGACTGGA AGNNACTTGA TTTGGTGGAA 
GACATAGATT GAATGGAAGA TCTGGATTGA TTGGAAGACC TAGATTTAGT GGAAGACATA 
GATTTTCTGG AAGACATGGA CTGACTGGAA GACTTGGATT TCTTTCTGGA AGACGTTGAT 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_013213986.1
CDS	231..1253
Translation	MALLEDVDFLEDVALLEDVGWLEDVDWLEDMDWLEDIGWLEDVDWLEDVDWLEDVDWLEDVDFLEDVDFREDRDFLEDVDFLEDLDLEAVDFLEDVDLEDMDFLEDAYFLEDADFLEDGDFLEDMDFLEDMDLEDMDIPEAMDFMEDKDFLEDVDRLEDLEVNWKTWILWKTCFFEDMDFQEDLNCLEDLDFLEDRnullCWKTLRLLEDMDFLEDMDFLEDMDFLEDMDFLEDMDLQEDMDLQEDMDLQEDIYWLEDLDLLEDMNCPEDIALLEDLDLVEETDFVWKTRVDWKnullLDLVEDIDMEDLDLEDLDLVEDIDFLEDMDLEDLDFFLEDVD

Target ORF information:

RefSeq Version	XM_013358532.1
Organism	Ictidomys tridecemlineatus(Thirteen-lined ground squirrel)
Definition	Ictidomys tridecemlineatus cerebellar degeneration-related protein 1, 34kDa (Cdr1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_013358532.1

ORF Insert Sequence:

ATGGCTTTGT TGGAAGACGT GGATTTCCTG GAAGACGTAG CTTTGTTGGA AGACGTAGGT 
TGGCTGGAAG ACGTGGATTG GCTGGAAGAC ATGGATTGGC TGGAAGACAT AGGTTGGCTG 
GAAGACGTGG ATTGGCTGGA AGACGTGGAT TGGCTGGAAG ACGTGGATTG GTTGGAAGAC 
GTGGATTTCC TGGAAGACGT GGATTTCCGG GAAGACAGGG ATTTCCTGGA AGACGTGGAT 
TTCCTGGAAG ACTTGGATTA GCTGGAAGCC GTGGATTTCC TGGAAGACGT GGATTAGCTG 
GAAGACATGG ATTTCCTGGA AGACGCGTAT TTCCTGGAAG ACGCAGATTT CCTGGAAGAC 
GGGGATTTCC TGGAAGACAT GGATTTCCTG GAAGATATGG ATTAGCTGGA AGACATGGAT 
ATTCCGGAAG CTATGGATTT TATGGAAGAC AAGGATTTTC TGGAAGATGT GGATAGGCTG 
GAAGACCTGG AGGTCAATTG GAAGACATGG ATCCTCTGGA AGACATGCTT TTTTGAAGAC 
ATGGATTTTC AGGAAGACCT TAATTGTCTG GAAGACCTGG ATTTTTTGGA AGACAGANTT 
TGCTGGAAGA CTCTGAGGTT ACTGGAAGAC ATGGATTTTC TGGAAGACAT GGATTTTCTG 
GAAGACATGG ATTTTCTGGA AGACATGGAT TTTCTGGAAG ACATGGATCT TCAGGAAGAC 
ATGGATCTTC AGGAAGACAT GGATCTTCAG GAAGACATAT ATTGGCTGGA AGACCTTGAC 
TTATTGGAAG ACATGAATTG TCCGGAAGAC ATAGCTTTAC TGGAAGACCT GGATTTAGTG 
GAAGAAACTG ATTTTGTCTG GAAGACACGG GTTGACTGGA AGNNACTTGA TTTGGTGGAA 
GACATAGATT GAATGGAAGA TCTGGATTGA TTGGAAGACC TAGATTTAGT GGAAGACATA 
GATTTTCTGG AAGACATGGA CTGACTGGAA GACTTGGATT TCTTTCTGGA AGACGTTGAT 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Cdr1 ( XM_013358532.2 ) cDNA ORF clone, Ictidomys tridecemlineatus(thirteen-lined ground squirrel) -> XP_013213986.2 Ictidomys tridecemlineatus cerebellar degeneration related protein 1 (Cdr1), mRNA.

Price & Availability↑

CloneID	OIc78037
Clone ID Related Accession (Same CDS sequence)	XM_013358532.2
Accession Version	XM_013358532.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1035bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-07-02
Organism	Ictidomys tridecemlineatus(thirteen-lined ground squirrel)
Product	LOW QUALITY PROTEIN: cerebellar degeneration-related antigen 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004936513.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jul 3, 2017 this sequence version replaced XM_013358532.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ictidomys tridecemlineatus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 5 indels internal stop codons :: corrected 6 genomic stop codons ##RefSeq-Attributes-END##

ATGGAAGACA TGGCTTTGTT GGAAGACGTG GATTTCCTGG AAGACGTAGC TTTGTTGGAA 
GACGTAGGTT GGCTGGAAGA CGTGGATTGG CTGGAAGACA TGGATTGGCT GGAAGACATA 
GGTTGGCTGG AAGACGTGGA TTGGCTGGAA GACGTGGATT GGCTGGAAGA CGTGGATTGG 
TTGGAAGACG TGGATTTCCT GGAAGACGTG GATTTCCGGG AAGACAGGGA TTTCCTGGAA 
GACGTGGATT TCCTGGAAGA CTTGGATTAG CTGGAAGCCG TGGATTTCCT GGAAGACGTG 
GATTAGCTGG AAGACATGGA TTTCCTGGAA GACGCGTATT TCCTGGAAGA CGCAGATTTC 
CTGGAAGACG GGGATTTCCT GGAAGACATG GATTTCCTGG AAGATATGGA TTAGCTGGAA 
GACATGGATA TTCCGGAAGC TATGGATTTT ATGGAAGACA AGGATTTTCT GGAAGATGTG 
GATAGGCTGG AAGACCTGGA GGTCAATTGG AAGACATGGA TCCTCTGGAA GACATGCNNT 
TTTTTGGAAG ACATGGATTT TCAGGAAGAC CTTAATTGTC TGGAAGACCT GGATTTTTTG 
GAAGACAGAN TTTGCTGGAA GACTCTGAGG TTACTGGAAG ACATGGATTT TCTGGAAGAC 
ATGGATTTTC TGGAAGACAT GGATTTTCTG GAAGACATGG ATTTTCTGGA AGACATGGAT 
CTTCAGGAAG ACATGGATCT TCAGGAAGAC ATGGATCTTC AGGAAGACAT ATATTGGCTG 
GAAGACCTTG ACTTATTGGA AGACATGAAT TGTCCGGAAG ACATAGCTTT ACTGGAAGAC 
CTGGATTTAG TGGAAGAAAC TGATTTTGTC TGGAAGACAC GGGTTGACTG GAAGNNACTT 
GATTTGGTGG AAGACATAGA TTGAATGGAA GATCTGGATT GATTGGAAGA CCTAGATTTA 
GTGGAAGACA TAGATTTTCT GGAAGACATG GACTGACTGG AAGACTTGGA TTTCTTTCTG 
GAAGACGTTG ATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_013213986.2
CDS	270..1304
Translation	MEDMALLEDVDFLEDVALLEDVGWLEDVDWLEDMDWLEDIGWLEDVDWLEDVDWLEDVDWLEDVDFLEDVDFREDRDFLEDVDFLEDLDLEAVDFLEDVDLEDMDFLEDAYFLEDADFLEDGDFLEDMDFLEDMDLEDMDIPEAMDFMEDKDFLEDVDRLEDLEVNWKTWILWKTCnullFLEDMDFQEDLNCLEDLDFLEDRnullCWKTLRLLEDMDFLEDMDFLEDMDFLEDMDFLEDMDLQEDMDLQEDMDLQEDIYWLEDLDLLEDMNCPEDIALLEDLDLVEETDFVWKTRVDWKnullLDLVEDIDMEDLDLEDLDLVEDIDFLEDMDLEDLDFFLEDVD

Target ORF information:

RefSeq Version	XM_013358532.2
Organism	Ictidomys tridecemlineatus(thirteen-lined ground squirrel)
Definition	Ictidomys tridecemlineatus cerebellar degeneration related protein 1 (Cdr1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_013358532.2

ORF Insert Sequence:

ATGGAAGACA TGGCTTTGTT GGAAGACGTG GATTTCCTGG AAGACGTAGC TTTGTTGGAA 
GACGTAGGTT GGCTGGAAGA CGTGGATTGG CTGGAAGACA TGGATTGGCT GGAAGACATA 
GGTTGGCTGG AAGACGTGGA TTGGCTGGAA GACGTGGATT GGCTGGAAGA CGTGGATTGG 
TTGGAAGACG TGGATTTCCT GGAAGACGTG GATTTCCGGG AAGACAGGGA TTTCCTGGAA 
GACGTGGATT TCCTGGAAGA CTTGGATTAG CTGGAAGCCG TGGATTTCCT GGAAGACGTG 
GATTAGCTGG AAGACATGGA TTTCCTGGAA GACGCGTATT TCCTGGAAGA CGCAGATTTC 
CTGGAAGACG GGGATTTCCT GGAAGACATG GATTTCCTGG AAGATATGGA TTAGCTGGAA 
GACATGGATA TTCCGGAAGC TATGGATTTT ATGGAAGACA AGGATTTTCT GGAAGATGTG 
GATAGGCTGG AAGACCTGGA GGTCAATTGG AAGACATGGA TCCTCTGGAA GACATGCNNT 
TTTTTGGAAG ACATGGATTT TCAGGAAGAC CTTAATTGTC TGGAAGACCT GGATTTTTTG 
GAAGACAGAN TTTGCTGGAA GACTCTGAGG TTACTGGAAG ACATGGATTT TCTGGAAGAC 
ATGGATTTTC TGGAAGACAT GGATTTTCTG GAAGACATGG ATTTTCTGGA AGACATGGAT 
CTTCAGGAAG ACATGGATCT TCAGGAAGAC ATGGATCTTC AGGAAGACAT ATATTGGCTG 
GAAGACCTTG ACTTATTGGA AGACATGAAT TGTCCGGAAG ACATAGCTTT ACTGGAAGAC 
CTGGATTTAG TGGAAGAAAC TGATTTTGTC TGGAAGACAC GGGTTGACTG GAAGNNACTT 
GATTTGGTGG AAGACATAGA TTGAATGGAA GATCTGGATT GATTGGAAGA CCTAGATTTA 
GTGGAAGACA TAGATTTTCT GGAAGACATG GACTGACTGG AAGACTTGGA TTTCTTTCTG 
GAAGACGTTG ATTAA