Gene Symbol | RLIM |
Entrez Gene ID | 100059136 |
Full Name | ring finger protein, LIM domain interacting |
Gene Type | protein-coding |
Organism | Equus caballus(horse) |
ORF » Species Summary » Equus caballus » RLIM cDNA ORF clone
Gene Symbol | RLIM |
Entrez Gene ID | 100059136 |
Full Name | ring finger protein, LIM domain interacting |
Gene Type | protein-coding |
Organism | Equus caballus(horse) |
mRNA | Protein | Name |
---|---|---|
XM_001504977.5 | XP_001505027.1 | E3 ubiquitin-protein ligase RLIM isoform X1 |
NM_001301238.1 | NP_001288167.1 | E3 ubiquitin-protein ligase RLIM |
XM_014728981.1 | XP_014584467.1 | E3 ubiquitin-protein ligase RLIM isoform X1 |
XM_014728981.2 | XP_014584467.1 | E3 ubiquitin-protein ligase RLIM isoform X1 |
XM_001504977.6 | XP_001505027.1 | E3 ubiquitin-protein ligase RLIM isoform X1 |
NM_001301238.2 | NP_001288167.1 | E3 ubiquitin-protein ligase RLIM |
Annotation of the Protein Coding Regions of the Equine Genome.
Hestand MS, Kalbfleisch TS, Coleman SJ, Zeng Z, Liu J, Orlando L, MacLeod JN
PloS one10(6)e0124375(2015)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following RLIM gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the RLIM cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OHb27115 | |
Clone ID Related Accession (Same CDS sequence) | XM_001504977.5 , NM_001301238.1 , XM_014728981.1 , XM_014728981.2 , XM_001504977.6 , NM_001301238.2 | |
Accession Version | NM_001301238.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1851bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-22 | |
Organism | Equus caballus(horse) | |
Product | E3 ubiquitin-protein ligase RLIM | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AAWR02034186.1. On Jul 29, 2014 this sequence version replaced XM_005614281.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA2743238, SAMN00991827 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAAAGCT CAGATTCTAA CGATAAAGGA AGTGGTGATC AGTCTGCAGC ACAGCGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001288167.1 |
CDS | 279..2129 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001301238.1 |
1 | ATGGAAAGCT CAGATTCTAA CGATAAAGGA AGTGGTGATC AGTCTGCAGC ACAGCGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb27115 | |
Clone ID Related Accession (Same CDS sequence) | XM_001504977.5 , NM_001301238.1 , XM_014728981.1 , XM_014728981.2 , XM_001504977.6 , NM_001301238.2 | |
Accession Version | NM_001301238.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1851bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-27 | |
Organism | Equus caballus(horse) | |
Product | E3 ubiquitin-protein ligase RLIM | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from PJAA01000001.1. On Jun 28, 2018 this sequence version replaced NM_001301238.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## CDS exon combination :: GDHK01068103.1, GDHK01068102.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMN05591754 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAAAGCT CAGATTCTAA CGATAAAGGA AGTGGTGATC AGTCTGCAGC ACAGCGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001288167.1 |
CDS | 279..2129 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001301238.2 |
1 | ATGGAAAGCT CAGATTCTAA CGATAAAGGA AGTGGTGATC AGTCTGCAGC ACAGCGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb27115 | |
Clone ID Related Accession (Same CDS sequence) | XM_001504977.5 , NM_001301238.1 , XM_014728981.1 , XM_014728981.2 , XM_001504977.6 , NM_001301238.2 | |
Accession Version | XM_001504977.5 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1851bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-11-19 | |
Organism | Equus caballus(horse) | |
Product | E3 ubiquitin-protein ligase RLIM isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_001877044.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Nov 20, 2015 this sequence version replaced XM_001504977.4. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Equus caballus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAAGCT CAGATTCTAA CGATAAAGGA AGTGGTGATC AGTCTGCAGC ACAGCGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_001505027.1 |
CDS | 219..2069 |
Translation |
Target ORF information:
Target ORF information:
|
XM_001504977.5 |
1 | ATGGAAAGCT CAGATTCTAA CGATAAAGGA AGTGGTGATC AGTCTGCAGC ACAGCGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb27115 | |
Clone ID Related Accession (Same CDS sequence) | XM_001504977.5 , NM_001301238.1 , XM_014728981.1 , XM_014728981.2 , XM_001504977.6 , NM_001301238.2 | |
Accession Version | XM_014728981.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1851bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-11-19 | |
Organism | Equus caballus(horse) | |
Product | E3 ubiquitin-protein ligase RLIM isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_001877044.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Equus caballus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAAGCT CAGATTCTAA CGATAAAGGA AGTGGTGATC AGTCTGCAGC ACAGCGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014584467.1 |
CDS | 283..2133 |
Translation |
Target ORF information:
Target ORF information:
|
XM_014728981.1 |
1 | ATGGAAAGCT CAGATTCTAA CGATAAAGGA AGTGGTGATC AGTCTGCAGC ACAGCGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb27115 | |
Clone ID Related Accession (Same CDS sequence) | XM_001504977.5 , NM_001301238.1 , XM_014728981.1 , XM_014728981.2 , XM_001504977.6 , NM_001301238.2 | |
Accession Version | XM_014728981.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1851bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-01-22 | |
Organism | Equus caballus(horse) | |
Product | E3 ubiquitin-protein ligase RLIM isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_009175.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 23, 2018 this sequence version replaced XM_014728981.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Equus caballus Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAAGCT CAGATTCTAA CGATAAAGGA AGTGGTGATC AGTCTGCAGC ACAGCGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014584467.1 |
CDS | 288..2138 |
Translation |
Target ORF information:
Target ORF information:
|
XM_014728981.2 |
1 | ATGGAAAGCT CAGATTCTAA CGATAAAGGA AGTGGTGATC AGTCTGCAGC ACAGCGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb27115 | |
Clone ID Related Accession (Same CDS sequence) | XM_001504977.5 , NM_001301238.1 , XM_014728981.1 , XM_014728981.2 , XM_001504977.6 , NM_001301238.2 | |
Accession Version | XM_001504977.6 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1851bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-01-22 | |
Organism | Equus caballus(horse) | |
Product | E3 ubiquitin-protein ligase RLIM isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_009175.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 23, 2018 this sequence version replaced XM_001504977.5. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Equus caballus Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAAGCT CAGATTCTAA CGATAAAGGA AGTGGTGATC AGTCTGCAGC ACAGCGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_001505027.1 |
CDS | 224..2074 |
Translation |
Target ORF information:
Target ORF information:
|
XM_001504977.6 |
1 | ATGGAAAGCT CAGATTCTAA CGATAAAGGA AGTGGTGATC AGTCTGCAGC ACAGCGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Annotation of the Protein Coding Regions of the Equine Genome. |