LOC100054397 cDNA ORF clone, Equus caballus(horse)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC100054397
Entrez Gene ID	100054397
Full Name	saoe class I histocompatibility antigen, A alpha chain-like
Gene Type	protein-coding
Organism	Equus caballus(horse)

mRNA and Protein(s)

mRNA	Protein	Name
XM_005603709.2	XP_005603766.1	saoe class I histocompatibility antigen, A alpha chain-like
XM_005603709.3	XP_005603766.1	saoe class I histocompatibility antigen, A alpha chain

Pathways from BioSystems
Gene Ontology

The following LOC100054397 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100054397 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OHb11576	XM_005603709.3 Latest version!	Equus caballus saoe class I histocompatibility antigen, A alpha chain (LOC100054397), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
View Old Accession Versions >>
OHb11576	XM_005603709.2	Equus caballus saoe class I histocompatibility antigen, A alpha chain-like (LOC100054397), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC100054397 ( XM_005603709.2 ) cDNA ORF clone, Equus caballus(horse) -> XP_005603766.1 Equus caballus saoe class I histocompatibility antigen, A alpha chain-like (LOC100054397), mRNA.

Price & Availability↑

CloneID	OHb11576
Clone ID Related Accession (Same CDS sequence)	XM_005603709.2 , XM_005603709.3
Accession Version	XM_005603709.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1110bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-11-19
Organism	Equus caballus(horse)
Product	saoe class I histocompatibility antigen, A alpha chain-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_001867389.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Nov 20, 2015 this sequence version replaced XM_005603709.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Equus caballus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCGGGTCA GGGCGCCCCG AACCCTCCTC CTACTGCTCT CGGGGGCCCT GGCCCTGACC 
AAGACCTGGG TGGGCTCCTC CCACTCCCTG AGATATTTGC ACACCGTCTT TTCCCCGCCC 
GGCCGCGAGG AGCCCCGCAT CATGTCGGTG GGCTACGTGG ACGACACGCA GTTCATGCGA 
TTCGACAGCG ACGCCGCGAG TCCGAGCGTG GAGCCGCGGG CGCCGTGGGC GGAGCAGGAG 
GGGCCGGAGT ATTGGGAGCG GGAGACGAGG ATCTACTTGG ACACTGCAGA GAATTTCCGA 
GTGGAGCTTA AAACCTTCCA CGACTACTAC AACCAGAGCG AGGACGGGTC TCACACCTTC 
CAGTGGATGT ATGGCTGCGA CGTGGGGCTC GATGGGCGCC TCCTCCGCGG GTACAGTCAG 
ATCGCCTACG ACAGCGCCGA TTTCCTGTCC CTGAACGAGG ACCTGCGCTC CTGGACCGCG 
GCGCACCCGG GGGCTCTGAT CTTCGCGCAC AAGTGGGAGG CGGCAGGTGC GGTGGAGCGC 
CACGGAATCT ACCTGGAGAG CACGTGCGTC GAATGGCTGG GCAGATTCCT GGAGAACGGG 
AAGGAGACGC TGCAGCGCGC AGACCCTCCG AAGATGCATG TGACCCACCA CACCACCTCT 
GACCATGAGG TCACCCTGAG GTGCTGGGCC CTGGGCTTCT ACCCTGCGGA GATCACCCTG 
ACCTGGCAGC GTGATGGGGA GGACCTGACC CAGGACATGG AGCTTGTGGA GACCAGGCCT 
GCAGGGGACG GGACCTTCCA GAAGTGGGCG GCTGTGATGG TGCCTTCTGG AGAGGAGCAG 
AGATACACGT GCCATGTACA GCATGAGGGG CTGCCTGAGC CCCTCATCCT GAGATGGGAG 
CCGCCTCCTC AGTCCACCAT CTCCATCCCG GGCCTCGTTG TTGGCCTAGT CCTCCTTGGA 
GCTTTGGTCA CTGGAGGTGT GGTGGCTGGA GTTGTGATGT GGAGGAAGAA GCGCTCAGAT 
GGAAATGGAG GGAGCCACAT ACTGAGTGAA GGCAGTGACA GTGCTCTAAT GTGTCATGGC 
AGCATGAGAA GGTGCCTTAT GGGGGACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005603766.1
CDS	30..1139
Translation	MRVRAPRTLLLLLSGALALTKTWVGSSHSLRYLHTVFSPPGREEPRIMSVGYVDDTQFMRFDSDAASPSVEPRAPWAEQEGPEYWERETRIYLDTAENFRVELKTFHDYYNQSEDGSHTFQWMYGCDVGLDGRLLRGYSQIAYDSADFLSLNEDLRSWTAAHPGALIFAHKWEAAGAVERHGIYLESTCVEWLGRFLENGKETLQRADPPKMHVTHHTTSDHEVTLRCWALGFYPAEITLTWQRDGEDLTQDMELVETRPAGDGTFQKWAAVMVPSGEEQRYTCHVQHEGLPEPLILRWEPPPQSTISIPGLVVGLVLLGALVTGGVVAGVVMWRKKRSDGNGGSHILSEGSDSALMCHGSMRRCLMGD

Target ORF information:

RefSeq Version	XM_005603709.2
Organism	Equus caballus(horse)
Definition	Equus caballus saoe class I histocompatibility antigen, A alpha chain-like (LOC100054397), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005603709.2

ORF Insert Sequence:

ATGCGGGTCA GGGCGCCCCG AACCCTCCTC CTACTGCTCT CGGGGGCCCT GGCCCTGACC 
AAGACCTGGG TGGGCTCCTC CCACTCCCTG AGATATTTGC ACACCGTCTT TTCCCCGCCC 
GGCCGCGAGG AGCCCCGCAT CATGTCGGTG GGCTACGTGG ACGACACGCA GTTCATGCGA 
TTCGACAGCG ACGCCGCGAG TCCGAGCGTG GAGCCGCGGG CGCCGTGGGC GGAGCAGGAG 
GGGCCGGAGT ATTGGGAGCG GGAGACGAGG ATCTACTTGG ACACTGCAGA GAATTTCCGA 
GTGGAGCTTA AAACCTTCCA CGACTACTAC AACCAGAGCG AGGACGGGTC TCACACCTTC 
CAGTGGATGT ATGGCTGCGA CGTGGGGCTC GATGGGCGCC TCCTCCGCGG GTACAGTCAG 
ATCGCCTACG ACAGCGCCGA TTTCCTGTCC CTGAACGAGG ACCTGCGCTC CTGGACCGCG 
GCGCACCCGG GGGCTCTGAT CTTCGCGCAC AAGTGGGAGG CGGCAGGTGC GGTGGAGCGC 
CACGGAATCT ACCTGGAGAG CACGTGCGTC GAATGGCTGG GCAGATTCCT GGAGAACGGG 
AAGGAGACGC TGCAGCGCGC AGACCCTCCG AAGATGCATG TGACCCACCA CACCACCTCT 
GACCATGAGG TCACCCTGAG GTGCTGGGCC CTGGGCTTCT ACCCTGCGGA GATCACCCTG 
ACCTGGCAGC GTGATGGGGA GGACCTGACC CAGGACATGG AGCTTGTGGA GACCAGGCCT 
GCAGGGGACG GGACCTTCCA GAAGTGGGCG GCTGTGATGG TGCCTTCTGG AGAGGAGCAG 
AGATACACGT GCCATGTACA GCATGAGGGG CTGCCTGAGC CCCTCATCCT GAGATGGGAG 
CCGCCTCCTC AGTCCACCAT CTCCATCCCG GGCCTCGTTG TTGGCCTAGT CCTCCTTGGA 
GCTTTGGTCA CTGGAGGTGT GGTGGCTGGA GTTGTGATGT GGAGGAAGAA GCGCTCAGAT 
GGAAATGGAG GGAGCCACAT ACTGAGTGAA GGCAGTGACA GTGCTCTAAT GTGTCATGGC 
AGCATGAGAA GGTGCCTTAT GGGGGACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC100054397 ( XM_005603709.3 ) cDNA ORF clone, Equus caballus(horse) -> XP_005603766.1 Equus caballus saoe class I histocompatibility antigen, A alpha chain (LOC100054397), mRNA.

Price & Availability↑

CloneID	OHb11576
Clone ID Related Accession (Same CDS sequence)	XM_005603709.2 , XM_005603709.3
Accession Version	XM_005603709.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1110bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-01-22
Organism	Equus caballus(horse)
Product	saoe class I histocompatibility antigen, A alpha chain
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_009163.3) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jan 23, 2018 this sequence version replaced XM_005603709.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Equus caballus Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCGGGTCA GGGCGCCCCG AACCCTCCTC CTACTGCTCT CGGGGGCCCT GGCCCTGACC 
AAGACCTGGG TGGGCTCCTC CCACTCCCTG AGATATTTGC ACACCGTCTT TTCCCCGCCC 
GGCCGCGAGG AGCCCCGCAT CATGTCGGTG GGCTACGTGG ACGACACGCA GTTCATGCGA 
TTCGACAGCG ACGCCGCGAG TCCGAGCGTG GAGCCGCGGG CGCCGTGGGC GGAGCAGGAG 
GGGCCGGAGT ATTGGGAGCG GGAGACGAGG ATCTACTTGG ACACTGCAGA GAATTTCCGA 
GTGGAGCTTA AAACCTTCCA CGACTACTAC AACCAGAGCG AGGACGGGTC TCACACCTTC 
CAGTGGATGT ATGGCTGCGA CGTGGGGCTC GATGGGCGCC TCCTCCGCGG GTACAGTCAG 
ATCGCCTACG ACAGCGCCGA TTTCCTGTCC CTGAACGAGG ACCTGCGCTC CTGGACCGCG 
GCGCACCCGG GGGCTCTGAT CTTCGCGCAC AAGTGGGAGG CGGCAGGTGC GGTGGAGCGC 
CACGGAATCT ACCTGGAGAG CACGTGCGTC GAATGGCTGG GCAGATTCCT GGAGAACGGG 
AAGGAGACGC TGCAGCGCGC AGACCCTCCG AAGATGCATG TGACCCACCA CACCACCTCT 
GACCATGAGG TCACCCTGAG GTGCTGGGCC CTGGGCTTCT ACCCTGCGGA GATCACCCTG 
ACCTGGCAGC GTGATGGGGA GGACCTGACC CAGGACATGG AGCTTGTGGA GACCAGGCCT 
GCAGGGGACG GGACCTTCCA GAAGTGGGCG GCTGTGATGG TGCCTTCTGG AGAGGAGCAG 
AGATACACGT GCCATGTACA GCATGAGGGG CTGCCTGAGC CCCTCATCCT GAGATGGGAG 
CCGCCTCCTC AGTCCACCAT CTCCATCCCG GGCCTCGTTG TTGGCCTAGT CCTCCTTGGA 
GCTTTGGTCA CTGGAGGTGT GGTGGCTGGA GTTGTGATGT GGAGGAAGAA GCGCTCAGAT 
GGAAATGGAG GGAGCCACAT ACTGAGTGAA GGCAGTGACA GTGCTCTAAT GTGTCATGGC 
AGCATGAGAA GGTGCCTTAT GGGGGACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005603766.1
CDS	140..1249
Translation	MRVRAPRTLLLLLSGALALTKTWVGSSHSLRYLHTVFSPPGREEPRIMSVGYVDDTQFMRFDSDAASPSVEPRAPWAEQEGPEYWERETRIYLDTAENFRVELKTFHDYYNQSEDGSHTFQWMYGCDVGLDGRLLRGYSQIAYDSADFLSLNEDLRSWTAAHPGALIFAHKWEAAGAVERHGIYLESTCVEWLGRFLENGKETLQRADPPKMHVTHHTTSDHEVTLRCWALGFYPAEITLTWQRDGEDLTQDMELVETRPAGDGTFQKWAAVMVPSGEEQRYTCHVQHEGLPEPLILRWEPPPQSTISIPGLVVGLVLLGALVTGGVVAGVVMWRKKRSDGNGGSHILSEGSDSALMCHGSMRRCLMGD

Target ORF information:

RefSeq Version	XM_005603709.3
Organism	Equus caballus(horse)
Definition	Equus caballus saoe class I histocompatibility antigen, A alpha chain (LOC100054397), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005603709.3

ORF Insert Sequence:

ATGCGGGTCA GGGCGCCCCG AACCCTCCTC CTACTGCTCT CGGGGGCCCT GGCCCTGACC 
AAGACCTGGG TGGGCTCCTC CCACTCCCTG AGATATTTGC ACACCGTCTT TTCCCCGCCC 
GGCCGCGAGG AGCCCCGCAT CATGTCGGTG GGCTACGTGG ACGACACGCA GTTCATGCGA 
TTCGACAGCG ACGCCGCGAG TCCGAGCGTG GAGCCGCGGG CGCCGTGGGC GGAGCAGGAG 
GGGCCGGAGT ATTGGGAGCG GGAGACGAGG ATCTACTTGG ACACTGCAGA GAATTTCCGA 
GTGGAGCTTA AAACCTTCCA CGACTACTAC AACCAGAGCG AGGACGGGTC TCACACCTTC 
CAGTGGATGT ATGGCTGCGA CGTGGGGCTC GATGGGCGCC TCCTCCGCGG GTACAGTCAG 
ATCGCCTACG ACAGCGCCGA TTTCCTGTCC CTGAACGAGG ACCTGCGCTC CTGGACCGCG 
GCGCACCCGG GGGCTCTGAT CTTCGCGCAC AAGTGGGAGG CGGCAGGTGC GGTGGAGCGC 
CACGGAATCT ACCTGGAGAG CACGTGCGTC GAATGGCTGG GCAGATTCCT GGAGAACGGG 
AAGGAGACGC TGCAGCGCGC AGACCCTCCG AAGATGCATG TGACCCACCA CACCACCTCT 
GACCATGAGG TCACCCTGAG GTGCTGGGCC CTGGGCTTCT ACCCTGCGGA GATCACCCTG 
ACCTGGCAGC GTGATGGGGA GGACCTGACC CAGGACATGG AGCTTGTGGA GACCAGGCCT 
GCAGGGGACG GGACCTTCCA GAAGTGGGCG GCTGTGATGG TGCCTTCTGG AGAGGAGCAG 
AGATACACGT GCCATGTACA GCATGAGGGG CTGCCTGAGC CCCTCATCCT GAGATGGGAG 
CCGCCTCCTC AGTCCACCAT CTCCATCCCG GGCCTCGTTG TTGGCCTAGT CCTCCTTGGA 
GCTTTGGTCA CTGGAGGTGT GGTGGCTGGA GTTGTGATGT GGAGGAAGAA GCGCTCAGAT 
GGAAATGGAG GGAGCCACAT ACTGAGTGAA GGCAGTGACA GTGCTCTAAT GTGTCATGGC 
AGCATGAGAA GGTGCCTTAT GGGGGACTGA