CG42340 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG42340
Entrez Gene ID	7354472
Full Name	CG42340 gene product from transcript CG42340-RD
Synonyms	CG12543,CG3367,Dmel\CG42340,Dmel_CG12543,Dmel_CG3367
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: X Map Location: 6A1-6B1

mRNA and Protein(s)

mRNA	Protein	Name
NM_132093.3	NP_572321.3	uncharacterized protein, isoform B
NM_001144693.2	NP_001138165.1	uncharacterized protein, isoform C
NM_001272346.1	NP_001259275.1	uncharacterized protein, isoform D

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG42340 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG42340 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OFa02651	NM_001144693.2 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant C (CG42340), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$258.30 $369.00
OFa02651	NM_001272346.1 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant D (CG42340), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$258.30 $369.00
OFa02652	NM_132093.3 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant B (CG42340), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$426.30 $609.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG42340 ( NM_001144693.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001138165.1 Drosophila melanogaster uncharacterized protein, transcript variant C (CG42340), mRNA.

Price & Availability↑

CloneID	OFa02651
Clone ID Related Accession (Same CDS sequence)	NM_001144693.2 , NM_001272346.1
Accession Version	NM_001144693.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1455bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform C
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 16, 2013 this sequence version replaced NM_001144693.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAACAAGA AGTCGCCACT GCCGTTGGCG GCATTTCTCG GCGGCGACGG CAGCGGCGGC 
AGCGGAAACT GTGCCGCCAG CGGTAGCAGC AATGTTGCAG CAACTGCAGC ATCGGCGGCT 
GCGAATGGTT CCGGCGGACG TGTCGGCGGT CGGCAGACGT CGACGGGCGG CTCGTCGAGC 
GGCGGCGGGG GATCCAAGTC GGAGAAGCAG GCGGCACGGG AGGCGGGCGG CGGCGGAGGC 
AGTTTATGCG GTTGCCAAAA GGCGCCCAAG TCACACTGCA TATCAGCAAC AGGCGTACTT 
TTGTTGGTGC TGCTCTACAC GGCCATGGGT TCCATTGTAT TCGTGACCCT CGAGGGCGAA 
TTGGAGGATG GTGGCGCCCT AGAAACCGCT GTGGCCGCTT CTAAGCCATA TCCCCGCACC 
GAACTGGCCA ACGCGGAGAT ACGATCCAGA ACTGTGGATC GTTTGTGGTC GATAACGGAG 
GACCTGAATA TATTGTATAA GGAGAATTGG ACGCGACTCG CCGCACAGGA GGTGCAGCTA 
TTTCAGGACA CTTTGCTGCG GGCGGTGCGA CAGTCGAAGG TTTATCCCCC CGGGGGAATC 
CAGTTGAATG CGCCCACACA CAAATGGACC TACGCCTCGG CCTTTCTCTA CTCCCTGACA 
TTAATTACAA CGATAGGCTA TGGCGGCATC TCACCGCGAA CGCAGTGGGG CCGAGTGGCG 
GCCTTGGTGT ACGCCCTGTT CGGGATTCCC ATCGTGCTGC TCTACCTATC CGCCATGGGC 
GAAGCGCTCT CGGCGGGAAT GCGCTGCCTG TTTCGGCGCC AGCGTGTGAA GGGCGGACCT 
GGTGGCGGTC CCGGTGGTGG CGCCTCCGGT GGAGTGGGCT CGGGCGCTGG TGGAAGCGGT 
GGCGGCCGAA AGACGGACAA GAATAAGGGC CAGGGGCACT ATGGCCACCA GAAGCTGCAT 
CAGTACGGCC TGCCTCCGTC GGTGTACCAG CAGCAGCAGG CGCAGCAAGC GCAACAGGCG 
CAGCAACAGC AGGCGCAGCA AGCGCAGCAG GCGCAGCAAC AGCAGGTGCA GCAGGGCAAG 
AAATCCTCGG GCAATCGCCG TGGCTCACCC AGTGTTCCCA TCTCCATCTG CGTGTGTGTG 
CTGCTCTGCT ATGTGAGCAG TGGTGCGATT CTGTTTCACA AATTGCAGAA CTGGAGTGTC 
CTGGAATCGC TCTACTTTTG CTTCACCTCG CTGGGAACCA TTGGATTCGG TGAGATGGCG 
CCCAATGGTG CAGTGGCTCT CTACACGGCC TCCGCGTACA TTCTGGTTGG CATGGCCGTG 
GTGGCCATGT GCTTCAGCCT CATCCAGACG GAGATCGTAC TGTGGCTGCG CCGGTTCAGC 
GTTCAGGATC ACGTGATGCC CAAGGCCGAG GAACTGGCTC TAGTCACCGT GGCAGTTACG 
CCGAAACCCT CCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001138165.1
CDS	1100..2554
Translation	MNKKSPLPLAAFLGGDGSGGSGNCAASGSSNVAATAASAAANGSGGRVGGRQTSTGGSSSGGGGSKSEKQAAREAGGGGGSLCGCQKAPKSHCISATGVLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWSITEDLNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHKWTYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKLQNWSVLESLYFCFTSLGTIGFGEMAPNGAVALYTASAYILVGMAVVAMCFSLIQTEIVLWLRRFSVQDHVMPKAEELALVTVAVTPKPS

Target ORF information:

RefSeq Version	NM_001144693.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant C (CG42340), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001144693.2

ORF Insert Sequence:

ATGAACAAGA AGTCGCCACT GCCGTTGGCG GCATTTCTCG GCGGCGACGG CAGCGGCGGC 
AGCGGAAACT GTGCCGCCAG CGGTAGCAGC AATGTTGCAG CAACTGCAGC ATCGGCGGCT 
GCGAATGGTT CCGGCGGACG TGTCGGCGGT CGGCAGACGT CGACGGGCGG CTCGTCGAGC 
GGCGGCGGGG GATCCAAGTC GGAGAAGCAG GCGGCACGGG AGGCGGGCGG CGGCGGAGGC 
AGTTTATGCG GTTGCCAAAA GGCGCCCAAG TCACACTGCA TATCAGCAAC AGGCGTACTT 
TTGTTGGTGC TGCTCTACAC GGCCATGGGT TCCATTGTAT TCGTGACCCT CGAGGGCGAA 
TTGGAGGATG GTGGCGCCCT AGAAACCGCT GTGGCCGCTT CTAAGCCATA TCCCCGCACC 
GAACTGGCCA ACGCGGAGAT ACGATCCAGA ACTGTGGATC GTTTGTGGTC GATAACGGAG 
GACCTGAATA TATTGTATAA GGAGAATTGG ACGCGACTCG CCGCACAGGA GGTGCAGCTA 
TTTCAGGACA CTTTGCTGCG GGCGGTGCGA CAGTCGAAGG TTTATCCCCC CGGGGGAATC 
CAGTTGAATG CGCCCACACA CAAATGGACC TACGCCTCGG CCTTTCTCTA CTCCCTGACA 
TTAATTACAA CGATAGGCTA TGGCGGCATC TCACCGCGAA CGCAGTGGGG CCGAGTGGCG 
GCCTTGGTGT ACGCCCTGTT CGGGATTCCC ATCGTGCTGC TCTACCTATC CGCCATGGGC 
GAAGCGCTCT CGGCGGGAAT GCGCTGCCTG TTTCGGCGCC AGCGTGTGAA GGGCGGACCT 
GGTGGCGGTC CCGGTGGTGG CGCCTCCGGT GGAGTGGGCT CGGGCGCTGG TGGAAGCGGT 
GGCGGCCGAA AGACGGACAA GAATAAGGGC CAGGGGCACT ATGGCCACCA GAAGCTGCAT 
CAGTACGGCC TGCCTCCGTC GGTGTACCAG CAGCAGCAGG CGCAGCAAGC GCAACAGGCG 
CAGCAACAGC AGGCGCAGCA AGCGCAGCAG GCGCAGCAAC AGCAGGTGCA GCAGGGCAAG 
AAATCCTCGG GCAATCGCCG TGGCTCACCC AGTGTTCCCA TCTCCATCTG CGTGTGTGTG 
CTGCTCTGCT ATGTGAGCAG TGGTGCGATT CTGTTTCACA AATTGCAGAA CTGGAGTGTC 
CTGGAATCGC TCTACTTTTG CTTCACCTCG CTGGGAACCA TTGGATTCGG TGAGATGGCG 
CCCAATGGTG CAGTGGCTCT CTACACGGCC TCCGCGTACA TTCTGGTTGG CATGGCCGTG 
GTGGCCATGT GCTTCAGCCT CATCCAGACG GAGATCGTAC TGTGGCTGCG CCGGTTCAGC 
GTTCAGGATC ACGTGATGCC CAAGGCCGAG GAACTGGCTC TAGTCACCGT GGCAGTTACG 
CCGAAACCCT CCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG42340 ( NM_001272346.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001259275.1 Drosophila melanogaster uncharacterized protein, transcript variant D (CG42340), mRNA.

Price & Availability↑

CloneID	OFa02651
Clone ID Related Accession (Same CDS sequence)	NM_001144693.2 , NM_001272346.1
Accession Version	NM_001272346.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1455bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform D
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAACAAGA AGTCGCCACT GCCGTTGGCG GCATTTCTCG GCGGCGACGG CAGCGGCGGC 
AGCGGAAACT GTGCCGCCAG CGGTAGCAGC AATGTTGCAG CAACTGCAGC ATCGGCGGCT 
GCGAATGGTT CCGGCGGACG TGTCGGCGGT CGGCAGACGT CGACGGGCGG CTCGTCGAGC 
GGCGGCGGGG GATCCAAGTC GGAGAAGCAG GCGGCACGGG AGGCGGGCGG CGGCGGAGGC 
AGTTTATGCG GTTGCCAAAA GGCGCCCAAG TCACACTGCA TATCAGCAAC AGGCGTACTT 
TTGTTGGTGC TGCTCTACAC GGCCATGGGT TCCATTGTAT TCGTGACCCT CGAGGGCGAA 
TTGGAGGATG GTGGCGCCCT AGAAACCGCT GTGGCCGCTT CTAAGCCATA TCCCCGCACC 
GAACTGGCCA ACGCGGAGAT ACGATCCAGA ACTGTGGATC GTTTGTGGTC GATAACGGAG 
GACCTGAATA TATTGTATAA GGAGAATTGG ACGCGACTCG CCGCACAGGA GGTGCAGCTA 
TTTCAGGACA CTTTGCTGCG GGCGGTGCGA CAGTCGAAGG TTTATCCCCC CGGGGGAATC 
CAGTTGAATG CGCCCACACA CAAATGGACC TACGCCTCGG CCTTTCTCTA CTCCCTGACA 
TTAATTACAA CGATAGGCTA TGGCGGCATC TCACCGCGAA CGCAGTGGGG CCGAGTGGCG 
GCCTTGGTGT ACGCCCTGTT CGGGATTCCC ATCGTGCTGC TCTACCTATC CGCCATGGGC 
GAAGCGCTCT CGGCGGGAAT GCGCTGCCTG TTTCGGCGCC AGCGTGTGAA GGGCGGACCT 
GGTGGCGGTC CCGGTGGTGG CGCCTCCGGT GGAGTGGGCT CGGGCGCTGG TGGAAGCGGT 
GGCGGCCGAA AGACGGACAA GAATAAGGGC CAGGGGCACT ATGGCCACCA GAAGCTGCAT 
CAGTACGGCC TGCCTCCGTC GGTGTACCAG CAGCAGCAGG CGCAGCAAGC GCAACAGGCG 
CAGCAACAGC AGGCGCAGCA AGCGCAGCAG GCGCAGCAAC AGCAGGTGCA GCAGGGCAAG 
AAATCCTCGG GCAATCGCCG TGGCTCACCC AGTGTTCCCA TCTCCATCTG CGTGTGTGTG 
CTGCTCTGCT ATGTGAGCAG TGGTGCGATT CTGTTTCACA AATTGCAGAA CTGGAGTGTC 
CTGGAATCGC TCTACTTTTG CTTCACCTCG CTGGGAACCA TTGGATTCGG TGAGATGGCG 
CCCAATGGTG CAGTGGCTCT CTACACGGCC TCCGCGTACA TTCTGGTTGG CATGGCCGTG 
GTGGCCATGT GCTTCAGCCT CATCCAGACG GAGATCGTAC TGTGGCTGCG CCGGTTCAGC 
GTTCAGGATC ACGTGATGCC CAAGGCCGAG GAACTGGCTC TAGTCACCGT GGCAGTTACG 
CCGAAACCCT CCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001259275.1
CDS	1100..2554
Translation	MNKKSPLPLAAFLGGDGSGGSGNCAASGSSNVAATAASAAANGSGGRVGGRQTSTGGSSSGGGGSKSEKQAAREAGGGGGSLCGCQKAPKSHCISATGVLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWSITEDLNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHKWTYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKLQNWSVLESLYFCFTSLGTIGFGEMAPNGAVALYTASAYILVGMAVVAMCFSLIQTEIVLWLRRFSVQDHVMPKAEELALVTVAVTPKPS

Target ORF information:

RefSeq Version	NM_001272346.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant D (CG42340), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001272346.1

ORF Insert Sequence:

ATGAACAAGA AGTCGCCACT GCCGTTGGCG GCATTTCTCG GCGGCGACGG CAGCGGCGGC 
AGCGGAAACT GTGCCGCCAG CGGTAGCAGC AATGTTGCAG CAACTGCAGC ATCGGCGGCT 
GCGAATGGTT CCGGCGGACG TGTCGGCGGT CGGCAGACGT CGACGGGCGG CTCGTCGAGC 
GGCGGCGGGG GATCCAAGTC GGAGAAGCAG GCGGCACGGG AGGCGGGCGG CGGCGGAGGC 
AGTTTATGCG GTTGCCAAAA GGCGCCCAAG TCACACTGCA TATCAGCAAC AGGCGTACTT 
TTGTTGGTGC TGCTCTACAC GGCCATGGGT TCCATTGTAT TCGTGACCCT CGAGGGCGAA 
TTGGAGGATG GTGGCGCCCT AGAAACCGCT GTGGCCGCTT CTAAGCCATA TCCCCGCACC 
GAACTGGCCA ACGCGGAGAT ACGATCCAGA ACTGTGGATC GTTTGTGGTC GATAACGGAG 
GACCTGAATA TATTGTATAA GGAGAATTGG ACGCGACTCG CCGCACAGGA GGTGCAGCTA 
TTTCAGGACA CTTTGCTGCG GGCGGTGCGA CAGTCGAAGG TTTATCCCCC CGGGGGAATC 
CAGTTGAATG CGCCCACACA CAAATGGACC TACGCCTCGG CCTTTCTCTA CTCCCTGACA 
TTAATTACAA CGATAGGCTA TGGCGGCATC TCACCGCGAA CGCAGTGGGG CCGAGTGGCG 
GCCTTGGTGT ACGCCCTGTT CGGGATTCCC ATCGTGCTGC TCTACCTATC CGCCATGGGC 
GAAGCGCTCT CGGCGGGAAT GCGCTGCCTG TTTCGGCGCC AGCGTGTGAA GGGCGGACCT 
GGTGGCGGTC CCGGTGGTGG CGCCTCCGGT GGAGTGGGCT CGGGCGCTGG TGGAAGCGGT 
GGCGGCCGAA AGACGGACAA GAATAAGGGC CAGGGGCACT ATGGCCACCA GAAGCTGCAT 
CAGTACGGCC TGCCTCCGTC GGTGTACCAG CAGCAGCAGG CGCAGCAAGC GCAACAGGCG 
CAGCAACAGC AGGCGCAGCA AGCGCAGCAG GCGCAGCAAC AGCAGGTGCA GCAGGGCAAG 
AAATCCTCGG GCAATCGCCG TGGCTCACCC AGTGTTCCCA TCTCCATCTG CGTGTGTGTG 
CTGCTCTGCT ATGTGAGCAG TGGTGCGATT CTGTTTCACA AATTGCAGAA CTGGAGTGTC 
CTGGAATCGC TCTACTTTTG CTTCACCTCG CTGGGAACCA TTGGATTCGG TGAGATGGCG 
CCCAATGGTG CAGTGGCTCT CTACACGGCC TCCGCGTACA TTCTGGTTGG CATGGCCGTG 
GTGGCCATGT GCTTCAGCCT CATCCAGACG GAGATCGTAC TGTGGCTGCG CCGGTTCAGC 
GTTCAGGATC ACGTGATGCC CAAGGCCGAG GAACTGGCTC TAGTCACCGT GGCAGTTACG 
CCGAAACCCT CCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG42340 ( NM_132093.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_572321.3 Drosophila melanogaster uncharacterized protein, transcript variant B (CG42340), mRNA.

Price & Availability↑

CloneID	OFa02652
Clone ID Related Accession (Same CDS sequence)	NM_132093.3
Accession Version	NM_132093.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2163bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 16, 2013 this sequence version replaced NM_132093.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAACAAGA AGTCGCCACT GCCGTTGGCG GCATTTCTCG GCGGCGACGG CAGCGGCGGC 
AGCGGAAACT GTGCCGCCAG CGGTAGCAGC AATGTTGCAG CAACTGCAGC ATCGGCGGCT 
GCGAATGGTT CCGGCGGACG TGTCGGCGGT CGGCAGACGT CGACGGGCGG CTCGTCGAGC 
GGCGGCGGGG GATCCAAGTC GGAGAAGCAG GCGGCACGGG AGGCGGGCGG CGGCGGAGGC 
AGTTTATGCG GTTGCCAAAA GGCGCCCAAG TCACACTGCA TATCAGCAAC AGGCGTACTT 
TTGTTGGTGC TGCTCTACAC GGCCATGGGT TCCATTGTAT TCGTGACCCT CGAGGGCGAA 
TTGGAGGATG GTGGCGCCCT AGAAACCGCT GTGGCCGCTT CTAAGCCATA TCCCCGCACC 
GAACTGGCCA ACGCGGAGAT ACGATCCAGA ACTGTGGATC GTTTGTGGTC GATAACGGAG 
GACCTGAATA TATTGTATAA GGAGAATTGG ACGCGACTCG CCGCACAGGA GGTGCAGCTA 
TTTCAGGACA CTTTGCTGCG GGCGGTGCGA CAGTCGAAGG TTTATCCCCC CGGGGGAATC 
CAGTTGAATG CGCCCACACA CAAATGGACC TACGCCTCGG CCTTTCTCTA CTCCCTGACA 
TTAATTACAA CGATAGGCTA TGGCGGCATC TCACCGCGAA CGCAGTGGGG CCGAGTGGCG 
GCCTTGGTGT ACGCCCTGTT CGGGATTCCC ATCGTGCTGC TCTACCTATC CGCCATGGGC 
GAAGCGCTCT CGGCGGGAAT GCGCTGCCTG TTTCGGCGCC AGCGTGTGAA GGGCGGACCT 
GGTGGCGGTC CCGGTGGTGG CGCCTCCGGT GGAGTGGGCT CGGGCGCTGG TGGAAGCGGT 
GGCGGCCGAA AGACGGACAA GAATAAGGGC CAGGGGCACT ATGGCCACCA GAAGCTGCAT 
CAGTACGGCC TGCCTCCGTC GGTGTACCAG CAGCAGCAGG CGCAGCAAGC GCAACAGGCG 
CAGCAACAGC AGGCGCAGCA AGCGCAGCAG GCGCAGCAAC AGCAGGTGCA GCAGGGCAAG 
AAATCCTCGG GCAATCGCCG TGGCTCACCC AGTGTTCCCA TCTCCATCTG CGTGTGTGTG 
CTGCTCTGCT ATGTGAGCAG TGGTGCGATT CTGTTTCACA AATTGCAGAA CTGGAGTGTC 
CTGGAATCGC TCTACTTTTG CTTCACCTCG CTGGGAACCA TTGGATTCGG TGAGATGGCG 
CCCAATGGTG CAGTGGCTCT CTACACGGCC TCCGCGTACA TTCTGGTTGG CATGGCCGTG 
GTGGCCATGT GCTTCAGCCT CATCCAGACG GAGATCGTAC TGTGGCTGCG CCGGTTCAGC 
GTTCAGGATC ACGTGATGCC CAAGGCCGAG GAACTGGCTC TAGTCACCGT GGCAGTTACG 
CCGAAACCCT CCTGACAGAG ACCTAGTGCG GATCCCAGTC TGGGCGTCGG ATTGGGAGTG 
GGTCTGGCCG GCGGCGCTCT GGGGCAGCCG CAGAACAATC TCGGCCAGCA CCAGACCATG 
TTCTTTGGAC CCGCCCACAC GCTGACGCAG TACAGTTCGC TGCCGCGCAG GAGTCACCTG 
CAGGCGGCCA ACAATTCCGG CGGAGGATCG GCCTTCCAGC GGAATACGCC CATCCGCAGA 
TCGACGGGCA TACCGGAGCA TCATCTGGAG TACTTTGTGC CGCGTAGCAT CAGTGAGTTC 
AATCTGTCGG GAGTGGGCGA TCTCGCCCTG CCGCCACCAC GTCGATACTC ACCCAATATG 
GTTGGTGGTG GTGGTGGAAT GGGCGGCATG GGCATGAATA TGGGTGGCAT GGGCATGAAC 
ATGGGCATGG GCATGGGTCT GCCACATGGC CTCCAGTTGG GTCCACCACA GACGCTGCTC 
TGCTCGGCCG CGCCCACTGT GCAGCAGCAA CAGCAGCCGC CTCCGCCGCC GGCACAACTG 
CAGATTGTCA CCCTAAAGCC GCGCAGCGAG AAGATGGTGA CCTTTGAGGA TGAGTCAAAG 
CAGGCGGTGG GCGGTGGAGC AGTTGGCGGA GTAGCTGGTG GCTCCGGAAC GCCACCGCAT 
TGTCCACACG GTGTGCCGAC GACTCCGCGA AAATCGCCAG CCGTGGGCGA TATATTCATG 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_572321.3
CDS	1100..3262
Translation	MNKKSPLPLAAFLGGDGSGGSGNCAASGSSNVAATAASAAANGSGGRVGGRQTSTGGSSSGGGGSKSEKQAAREAGGGGGSLCGCQKAPKSHCISATGVLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWSITEDLNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHKWTYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKLQNWSVLESLYFCFTSLGTIGFGEMAPNGAVALYTASAYILVGMAVVAMCFSLIQTEIVLWLRRFSVQDHVMPKAEELALVTVAVTPKPS*QRPSADPSLGVGLGVGLAGGALGQPQNNLGQHQTMFFGPAHTLTQYSSLPRRSHLQAANNSGGGSAFQRNTPIRRSTGIPEHHLEYFVPRSISEFNLSGVGDLALPPPRRYSPNMVGGGGGMGGMGMNMGGMGMNMGMGMGLPHGLQLGPPQTLLCSAAPTVQQQQQPPPPPAQLQIVTLKPRSEKMVTFEDESKQAVGGGAVGGVAGGSGTPPHCPHGVPTTPRKSPAVGDIFM

Target ORF information:

RefSeq Version	NM_132093.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant B (CG42340), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_132093.3

ORF Insert Sequence:

ATGAACAAGA AGTCGCCACT GCCGTTGGCG GCATTTCTCG GCGGCGACGG CAGCGGCGGC 
AGCGGAAACT GTGCCGCCAG CGGTAGCAGC AATGTTGCAG CAACTGCAGC ATCGGCGGCT 
GCGAATGGTT CCGGCGGACG TGTCGGCGGT CGGCAGACGT CGACGGGCGG CTCGTCGAGC 
GGCGGCGGGG GATCCAAGTC GGAGAAGCAG GCGGCACGGG AGGCGGGCGG CGGCGGAGGC 
AGTTTATGCG GTTGCCAAAA GGCGCCCAAG TCACACTGCA TATCAGCAAC AGGCGTACTT 
TTGTTGGTGC TGCTCTACAC GGCCATGGGT TCCATTGTAT TCGTGACCCT CGAGGGCGAA 
TTGGAGGATG GTGGCGCCCT AGAAACCGCT GTGGCCGCTT CTAAGCCATA TCCCCGCACC 
GAACTGGCCA ACGCGGAGAT ACGATCCAGA ACTGTGGATC GTTTGTGGTC GATAACGGAG 
GACCTGAATA TATTGTATAA GGAGAATTGG ACGCGACTCG CCGCACAGGA GGTGCAGCTA 
TTTCAGGACA CTTTGCTGCG GGCGGTGCGA CAGTCGAAGG TTTATCCCCC CGGGGGAATC 
CAGTTGAATG CGCCCACACA CAAATGGACC TACGCCTCGG CCTTTCTCTA CTCCCTGACA 
TTAATTACAA CGATAGGCTA TGGCGGCATC TCACCGCGAA CGCAGTGGGG CCGAGTGGCG 
GCCTTGGTGT ACGCCCTGTT CGGGATTCCC ATCGTGCTGC TCTACCTATC CGCCATGGGC 
GAAGCGCTCT CGGCGGGAAT GCGCTGCCTG TTTCGGCGCC AGCGTGTGAA GGGCGGACCT 
GGTGGCGGTC CCGGTGGTGG CGCCTCCGGT GGAGTGGGCT CGGGCGCTGG TGGAAGCGGT 
GGCGGCCGAA AGACGGACAA GAATAAGGGC CAGGGGCACT ATGGCCACCA GAAGCTGCAT 
CAGTACGGCC TGCCTCCGTC GGTGTACCAG CAGCAGCAGG CGCAGCAAGC GCAACAGGCG 
CAGCAACAGC AGGCGCAGCA AGCGCAGCAG GCGCAGCAAC AGCAGGTGCA GCAGGGCAAG 
AAATCCTCGG GCAATCGCCG TGGCTCACCC AGTGTTCCCA TCTCCATCTG CGTGTGTGTG 
CTGCTCTGCT ATGTGAGCAG TGGTGCGATT CTGTTTCACA AATTGCAGAA CTGGAGTGTC 
CTGGAATCGC TCTACTTTTG CTTCACCTCG CTGGGAACCA TTGGATTCGG TGAGATGGCG 
CCCAATGGTG CAGTGGCTCT CTACACGGCC TCCGCGTACA TTCTGGTTGG CATGGCCGTG 
GTGGCCATGT GCTTCAGCCT CATCCAGACG GAGATCGTAC TGTGGCTGCG CCGGTTCAGC 
GTTCAGGATC ACGTGATGCC CAAGGCCGAG GAACTGGCTC TAGTCACCGT GGCAGTTACG 
CCGAAACCCT CCTGACAGAG ACCTAGTGCG GATCCCAGTC TGGGCGTCGG ATTGGGAGTG 
GGTCTGGCCG GCGGCGCTCT GGGGCAGCCG CAGAACAATC TCGGCCAGCA CCAGACCATG 
TTCTTTGGAC CCGCCCACAC GCTGACGCAG TACAGTTCGC TGCCGCGCAG GAGTCACCTG 
CAGGCGGCCA ACAATTCCGG CGGAGGATCG GCCTTCCAGC GGAATACGCC CATCCGCAGA 
TCGACGGGCA TACCGGAGCA TCATCTGGAG TACTTTGTGC CGCGTAGCAT CAGTGAGTTC 
AATCTGTCGG GAGTGGGCGA TCTCGCCCTG CCGCCACCAC GTCGATACTC ACCCAATATG 
GTTGGTGGTG GTGGTGGAAT GGGCGGCATG GGCATGAATA TGGGTGGCAT GGGCATGAAC 
ATGGGCATGG GCATGGGTCT GCCACATGGC CTCCAGTTGG GTCCACCACA GACGCTGCTC 
TGCTCGGCCG CGCCCACTGT GCAGCAGCAA CAGCAGCCGC CTCCGCCGCC GGCACAACTG 
CAGATTGTCA CCCTAAAGCC GCGCAGCGAG AAGATGGTGA CCTTTGAGGA TGAGTCAAAG 
CAGGCGGTGG GCGGTGGAGC AGTTGGCGGA GTAGCTGGTG GCTCCGGAAC GCCACCGCAT 
TGTCCACACG GTGTGCCGAC GACTCCGCGA AAATCGCCAG CCGTGGGCGA TATATTCATG 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG42340 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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