Gene Symbol | raw |
Entrez Gene ID | 44851 |
Full Name | CG12437 gene product from transcript CG12437-RB |
Synonyms | CG12437,CG9321,Dmel\CG12437,cyr,ensh,l(2)06825,l(2)k03514 |
Gene Type | protein-coding |
Organism | Drosophila melanogaster(fruit fly) |
Genome |
ORF » Species Summary » Drosophila melanogaster » raw cDNA ORF clone
Gene Symbol | raw |
Entrez Gene ID | 44851 |
Full Name | CG12437 gene product from transcript CG12437-RB |
Synonyms | CG12437,CG9321,Dmel\CG12437,cyr,ensh,l(2)06825,l(2)k03514 |
Gene Type | protein-coding |
Organism | Drosophila melanogaster(fruit fly) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001298830.1 | NP_001285759.1 | raw, isoform D |
NM_164836.3 | NP_723416.1 | raw, isoform A |
NM_080050.3 | NP_524789.2 | raw, isoform B |
NM_001298831.1 | NP_001285760.1 | raw, isoform E |
NM_001201804.1 | NP_001188733.1 | raw, isoform C |
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Raw defines a potential point of convergence in distinct pathways shaping terminal dendrite patterning.
Title: Coordinate control of terminal dendrite patterning and dynamics by the membrane protein Raw.
loss of DE-cadherin strongly enhances the raw mutant gonad phenotype, while increasing DE-cadherin function rescues this phenotype
Title: raw Functions through JNK signaling and cadherin-based adhesion to regulate Drosophila gonad morphogenesis.
In Drosophila, quenching of basal activator protein 1 (AP-1) transcription factor activity serves as a prerequisite to its tight spatial and temporal control by the JNK (Jun N-terminal kinase) signaling cascade.
Title: Raw mediates antagonism of AP-1 activity in Drosophila.
The following raw gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the raw cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OFa15212 | |
Clone ID Related Accession (Same CDS sequence) | NM_164836.3 , NM_001298831.1 , NM_001201804.1 | |
Accession Version | NM_164836.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2970bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-24 | |
Organism | Drosophila melanogaster(fruit fly) | |
Product | raw, isoform A | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jul 15, 2014 this sequence version replaced NM_164836.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## |
1 | ATGAAAACTG AAAGCAGCAG TTATCTAGGC AAAATGCGCT TGCAACATCG TTATGCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_723416.1 |
CDS | 230..3199 |
Translation |
Target ORF information:
Target ORF information:
|
NM_164836.3 |
1 | ATGAAAACTG AAAGCAGCAG TTATCTAGGC AAAATGCGCT TGCAACATCG TTATGCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OFa15212 | |
Clone ID Related Accession (Same CDS sequence) | NM_164836.3 , NM_001298831.1 , NM_001201804.1 | |
Accession Version | NM_001298831.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2970bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-24 | |
Organism | Drosophila melanogaster(fruit fly) | |
Product | raw, isoform E | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## |
1 | ATGAAAACTG AAAGCAGCAG TTATCTAGGC AAAATGCGCT TGCAACATCG TTATGCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001285760.1 |
CDS | 751..3720 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001298831.1 |
1 | ATGAAAACTG AAAGCAGCAG TTATCTAGGC AAAATGCGCT TGCAACATCG TTATGCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OFa15212 | |
Clone ID Related Accession (Same CDS sequence) | NM_164836.3 , NM_001298831.1 , NM_001201804.1 | |
Accession Version | NM_001201804.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2970bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-24 | |
Organism | Drosophila melanogaster(fruit fly) | |
Product | raw, isoform C | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## |
1 | ATGAAAACTG AAAGCAGCAG TTATCTAGGC AAAATGCGCT TGCAACATCG TTATGCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001188733.1 |
CDS | 430..3399 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001201804.1 |
1 | ATGAAAACTG AAAGCAGCAG TTATCTAGGC AAAATGCGCT TGCAACATCG TTATGCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OFa16444 | |
Clone ID Related Accession (Same CDS sequence) | NM_080050.3 | |
Accession Version | NM_080050.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2418bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-24 | |
Organism | Drosophila melanogaster(fruit fly) | |
Product | raw, isoform B | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jan 31, 2011 this sequence version replaced NM_080050.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## |
1 | ATGCACAAAA TGGTTAAATT ATTCCTCAGA GAAGTTCTGA ATGCATGGCG AGCAAAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_524789.2 |
CDS | 248..2665 |
Translation |
Target ORF information:
Target ORF information:
|
NM_080050.3 |
1 | ATGCACAAAA TGGTTAAATT ATTCCTCAGA GAAGTTCTGA ATGCATGGCG AGCAAAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OFa22222 | |
Clone ID Related Accession (Same CDS sequence) | NM_001298830.1 | |
Accession Version | NM_001298830.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2499bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-24 | |
Organism | Drosophila melanogaster(fruit fly) | |
Product | raw, isoform D | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## |
1 | ATGATGCAAT TGTCAATGAT ATTTTTGCTG CTTCTGATGA CGATGTCAGT GTTTTCTTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001285759.1 |
CDS | 351..2849 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001298830.1 |
1 | ATGATGCAAT TGTCAATGAT ATTTTTGCTG CTTCTGATGA CGATGTCAGT GTTTTCTTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data. |
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders. |
Sequence finishing and mapping of Drosophila melanogaster heterochromatin. |
The Release 5.1 annotation of Drosophila melanogaster heterochromatin. |
Combined evidence annotation of transposable elements in genome sequences. |