CG11438 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG11438
Entrez Gene ID	40469
Full Name	CG11438 gene product from transcript CG11438-RB
Synonyms	Css1alpha,Dmel\CG11438,LPP-like,PAP2,WUN-like
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3L Map Location: 79E4-79E4

mRNA and Protein(s)

mRNA	Protein	Name
NM_001300216.1	NP_001287145.1	uncharacterized protein, isoform B
NM_141135.3	NP_649392.1	uncharacterized protein, isoform A

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG11438 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG11438 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa19271	NM_141135.3 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant A (CG11438), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa19271	NM_001300216.1 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant B (CG11438), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG11438 ( NM_001300216.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001287145.1 Drosophila melanogaster uncharacterized protein, transcript variant B (CG11438), mRNA.

Price & Availability↑

CloneID	OFa19271
Clone ID Related Accession (Same CDS sequence)	NM_001300216.1 , NM_141135.3
Accession Version	NM_001300216.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1026bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTCCAAGT ATTCGAAGCT GGCCCGCGGG TTCTGCGACC TGCTGATCTG GGTGGCCCTC 
AGCGTGGCCA GTGTGCTGCT CCACAAGATG GGGCGTCCCT TCCGGCGCGG CTTCTTCTGT 
GGCGACGAGA CCCTCAGCTA TCCAGCGCGC GACGGCACCA TCAGCTCCAA GGTGATCATC 
GCCATCGTCC TCGGAGTGCC CAACGCCGTG ATCGTAGTGG TGGAGTTGTT TAGGCAGCTG 
CCCGGTGGGC CGCTTAGAGA GGCGGGCGGT AAGCGGGATA GCTGCCGGAT AGCCCACCGC 
CTCGGGGTCC TTTATCGCCA GGTTATCTTC TACCTGTACG GCCTCGCCAT GGTCACGTTC 
ACCACGATGC TGACGAAGCT GTGCCTCGGG CGTCTGCGAC CGCACTTCCT CGCCGTGTGC 
CAGCCCATGC TGCCGGACGG AAGCAGCTGC CAGGACGCCC AGAACCTGGG ACGCTACATA 
GACAGTTTTA CGTGCAGCAA CGCCAACATG ACCGACTACC AGTTCAAGGA GCTCTACCAG 
TCCTTCCCAA GCGGCCACGC CAGCATGGCC ATGTATGCTA TGCTCTACCT GGCCATCTAC 
CTGCAGGCGG CGCTCAGTAC GCGCGTCTCC AAGCTGCTGA AGCATCTGCT GCAGTTCCTC 
TTCGTCATGT TCGGCTGGTA CGTATCGCTG ACTCGGATCA TCGACTATTA CCACCACTGG 
AGCGACGTCC TGGCGGGGGC GGCATTGGGC GTGGTGTTCG CTTGGCTGAC GAGTGCCTAT 
GTGGCCGACT TGTTTGCCGG CAAGCGGTGG CCGAAGACTG GCTACTCGGC CAACACGCTG 
CGCAAGCCGC AGGTCTCGCC GAAGAGCTCC ACCAAGTCGC AGGCGGGAGG ATCCACGTCG 
GGAGCGGGTC AGCCGCCCGC TCTGCCGGCC TATACCTTTG GAACGCTGCC CTACCTGGCG 
GCACATCCCG CACAGGCGCA GGCGCAGTAC GCCCAGCCCT ATCACAACTA CGGCTACGTG 
CCGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001287145.1
CDS	1292..2317
Translation	MSKYSKLARGFCDLLIWVALSVASVLLHKMGRPFRRGFFCGDETLSYPARDGTISSKVIIAIVLGVPNAVIVVVELFRQLPGGPLREAGGKRDSCRIAHRLGVLYRQVIFYLYGLAMVTFTTMLTKLCLGRLRPHFLAVCQPMLPDGSSCQDAQNLGRYIDSFTCSNANMTDYQFKELYQSFPSGHASMAMYAMLYLAIYLQAALSTRVSKLLKHLLQFLFVMFGWYVSLTRIIDYYHHWSDVLAGAALGVVFAWLTSAYVADLFAGKRWPKTGYSANTLRKPQVSPKSSTKSQAGGSTSGAGQPPALPAYTFGTLPYLAAHPAQAQAQYAQPYHNYGYVP

Target ORF information:

RefSeq Version	NM_001300216.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant B (CG11438), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001300216.1

ORF Insert Sequence:

ATGTCCAAGT ATTCGAAGCT GGCCCGCGGG TTCTGCGACC TGCTGATCTG GGTGGCCCTC 
AGCGTGGCCA GTGTGCTGCT CCACAAGATG GGGCGTCCCT TCCGGCGCGG CTTCTTCTGT 
GGCGACGAGA CCCTCAGCTA TCCAGCGCGC GACGGCACCA TCAGCTCCAA GGTGATCATC 
GCCATCGTCC TCGGAGTGCC CAACGCCGTG ATCGTAGTGG TGGAGTTGTT TAGGCAGCTG 
CCCGGTGGGC CGCTTAGAGA GGCGGGCGGT AAGCGGGATA GCTGCCGGAT AGCCCACCGC 
CTCGGGGTCC TTTATCGCCA GGTTATCTTC TACCTGTACG GCCTCGCCAT GGTCACGTTC 
ACCACGATGC TGACGAAGCT GTGCCTCGGG CGTCTGCGAC CGCACTTCCT CGCCGTGTGC 
CAGCCCATGC TGCCGGACGG AAGCAGCTGC CAGGACGCCC AGAACCTGGG ACGCTACATA 
GACAGTTTTA CGTGCAGCAA CGCCAACATG ACCGACTACC AGTTCAAGGA GCTCTACCAG 
TCCTTCCCAA GCGGCCACGC CAGCATGGCC ATGTATGCTA TGCTCTACCT GGCCATCTAC 
CTGCAGGCGG CGCTCAGTAC GCGCGTCTCC AAGCTGCTGA AGCATCTGCT GCAGTTCCTC 
TTCGTCATGT TCGGCTGGTA CGTATCGCTG ACTCGGATCA TCGACTATTA CCACCACTGG 
AGCGACGTCC TGGCGGGGGC GGCATTGGGC GTGGTGTTCG CTTGGCTGAC GAGTGCCTAT 
GTGGCCGACT TGTTTGCCGG CAAGCGGTGG CCGAAGACTG GCTACTCGGC CAACACGCTG 
CGCAAGCCGC AGGTCTCGCC GAAGAGCTCC ACCAAGTCGC AGGCGGGAGG ATCCACGTCG 
GGAGCGGGTC AGCCGCCCGC TCTGCCGGCC TATACCTTTG GAACGCTGCC CTACCTGGCG 
GCACATCCCG CACAGGCGCA GGCGCAGTAC GCCCAGCCCT ATCACAACTA CGGCTACGTG 
CCGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG11438 ( NM_141135.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_649392.1 Drosophila melanogaster uncharacterized protein, transcript variant A (CG11438), mRNA.

Price & Availability↑

CloneID	OFa19271
Clone ID Related Accession (Same CDS sequence)	NM_001300216.1 , NM_141135.3
Accession Version	NM_141135.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1026bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_141135.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTCCAAGT ATTCGAAGCT GGCCCGCGGG TTCTGCGACC TGCTGATCTG GGTGGCCCTC 
AGCGTGGCCA GTGTGCTGCT CCACAAGATG GGGCGTCCCT TCCGGCGCGG CTTCTTCTGT 
GGCGACGAGA CCCTCAGCTA TCCAGCGCGC GACGGCACCA TCAGCTCCAA GGTGATCATC 
GCCATCGTCC TCGGAGTGCC CAACGCCGTG ATCGTAGTGG TGGAGTTGTT TAGGCAGCTG 
CCCGGTGGGC CGCTTAGAGA GGCGGGCGGT AAGCGGGATA GCTGCCGGAT AGCCCACCGC 
CTCGGGGTCC TTTATCGCCA GGTTATCTTC TACCTGTACG GCCTCGCCAT GGTCACGTTC 
ACCACGATGC TGACGAAGCT GTGCCTCGGG CGTCTGCGAC CGCACTTCCT CGCCGTGTGC 
CAGCCCATGC TGCCGGACGG AAGCAGCTGC CAGGACGCCC AGAACCTGGG ACGCTACATA 
GACAGTTTTA CGTGCAGCAA CGCCAACATG ACCGACTACC AGTTCAAGGA GCTCTACCAG 
TCCTTCCCAA GCGGCCACGC CAGCATGGCC ATGTATGCTA TGCTCTACCT GGCCATCTAC 
CTGCAGGCGG CGCTCAGTAC GCGCGTCTCC AAGCTGCTGA AGCATCTGCT GCAGTTCCTC 
TTCGTCATGT TCGGCTGGTA CGTATCGCTG ACTCGGATCA TCGACTATTA CCACCACTGG 
AGCGACGTCC TGGCGGGGGC GGCATTGGGC GTGGTGTTCG CTTGGCTGAC GAGTGCCTAT 
GTGGCCGACT TGTTTGCCGG CAAGCGGTGG CCGAAGACTG GCTACTCGGC CAACACGCTG 
CGCAAGCCGC AGGTCTCGCC GAAGAGCTCC ACCAAGTCGC AGGCGGGAGG ATCCACGTCG 
GGAGCGGGTC AGCCGCCCGC TCTGCCGGCC TATACCTTTG GAACGCTGCC CTACCTGGCG 
GCACATCCCG CACAGGCGCA GGCGCAGTAC GCCCAGCCCT ATCACAACTA CGGCTACGTG 
CCGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_649392.1
CDS	79..1104
Translation	MSKYSKLARGFCDLLIWVALSVASVLLHKMGRPFRRGFFCGDETLSYPARDGTISSKVIIAIVLGVPNAVIVVVELFRQLPGGPLREAGGKRDSCRIAHRLGVLYRQVIFYLYGLAMVTFTTMLTKLCLGRLRPHFLAVCQPMLPDGSSCQDAQNLGRYIDSFTCSNANMTDYQFKELYQSFPSGHASMAMYAMLYLAIYLQAALSTRVSKLLKHLLQFLFVMFGWYVSLTRIIDYYHHWSDVLAGAALGVVFAWLTSAYVADLFAGKRWPKTGYSANTLRKPQVSPKSSTKSQAGGSTSGAGQPPALPAYTFGTLPYLAAHPAQAQAQYAQPYHNYGYVP

Target ORF information:

RefSeq Version	NM_141135.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant A (CG11438), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_141135.3

ORF Insert Sequence:

ATGTCCAAGT ATTCGAAGCT GGCCCGCGGG TTCTGCGACC TGCTGATCTG GGTGGCCCTC 
AGCGTGGCCA GTGTGCTGCT CCACAAGATG GGGCGTCCCT TCCGGCGCGG CTTCTTCTGT 
GGCGACGAGA CCCTCAGCTA TCCAGCGCGC GACGGCACCA TCAGCTCCAA GGTGATCATC 
GCCATCGTCC TCGGAGTGCC CAACGCCGTG ATCGTAGTGG TGGAGTTGTT TAGGCAGCTG 
CCCGGTGGGC CGCTTAGAGA GGCGGGCGGT AAGCGGGATA GCTGCCGGAT AGCCCACCGC 
CTCGGGGTCC TTTATCGCCA GGTTATCTTC TACCTGTACG GCCTCGCCAT GGTCACGTTC 
ACCACGATGC TGACGAAGCT GTGCCTCGGG CGTCTGCGAC CGCACTTCCT CGCCGTGTGC 
CAGCCCATGC TGCCGGACGG AAGCAGCTGC CAGGACGCCC AGAACCTGGG ACGCTACATA 
GACAGTTTTA CGTGCAGCAA CGCCAACATG ACCGACTACC AGTTCAAGGA GCTCTACCAG 
TCCTTCCCAA GCGGCCACGC CAGCATGGCC ATGTATGCTA TGCTCTACCT GGCCATCTAC 
CTGCAGGCGG CGCTCAGTAC GCGCGTCTCC AAGCTGCTGA AGCATCTGCT GCAGTTCCTC 
TTCGTCATGT TCGGCTGGTA CGTATCGCTG ACTCGGATCA TCGACTATTA CCACCACTGG 
AGCGACGTCC TGGCGGGGGC GGCATTGGGC GTGGTGTTCG CTTGGCTGAC GAGTGCCTAT 
GTGGCCGACT TGTTTGCCGG CAAGCGGTGG CCGAAGACTG GCTACTCGGC CAACACGCTG 
CGCAAGCCGC AGGTCTCGCC GAAGAGCTCC ACCAAGTCGC AGGCGGGAGG ATCCACGTCG 
GGAGCGGGTC AGCCGCCCGC TCTGCCGGCC TATACCTTTG GAACGCTGCC CTACCTGGCG 
GCACATCCCG CACAGGCGCA GGCGCAGTAC GCCCAGCCCT ATCACAACTA CGGCTACGTG 
CCGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG11438 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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