CG3335 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG3335
Entrez Gene ID	39119
Full Name	CG3335 gene product from transcript CG3335-RA
Synonyms	Dm-RBD-1,Dmel\CG3335,Q9VT19,cg3335
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3L Map Location: 67C2-67C2

mRNA and Protein(s)

mRNA	Protein	Name
NM_140080.2	NP_648337.1	uncharacterized protein

Pathways from BioSystems

Homologies

Rattus norvegicus (Norway rat)	Rbm19	XP_003751242.1
Kluyveromyces lactis	KLLA0D14949g	XP_453723.1
Eremothecium gossypii	AGOS_ADR035C	NP_984131.2
Arabidopsis thaliana (thale cress)	AT5G08695	NP_001119193.1
Homo sapiens (human)	RBM19	NP_001140170.1
Danio rerio (zebrafish)	rbm19	NP_944597.1
Drosophila melanogaster (fruit fly)	CG3335	NP_648337.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP005249	XP_314164.4
Caenorhabditis elegans (roundworm)	rbd-1	NP_502432.1
Schizosaccharomyces pombe (fission yeast)	SPBP22H7.02c	NP_595599.1
Magnaporthe oryzae (rice blast fungus)	MGG_01217	XP_003714116.1
Xenopus tropicalis (tropical clawed frog)	rbm19	NP_001163962.1
	RBM19	XP_001106082.1
Bos taurus (cattle)	RBM19	NP_001039420.1
Saccharomyces cerevisiae (baker's yeast)	MRD1	NP_015437.1
Neurospora crassa	NCU02611	XP_965014.1
Mus musculus (house mouse)	Rbm19	NP_083038.1
Gallus gallus (chicken)	RBM19	NP_001034357.2
Pan troglodytes (chimpanzee)	RBM19	XP_522578.2
Canis lupus familiaris (dog)	RBM19	XP_005636326.1
Arabidopsis thaliana (thale cress)	AT4G19610	NP_193696.3
Oryza sativa (rice)	Os04g0611500	NP_001053839.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG3335 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG3335 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa18067	NM_140080.2 Latest version!	Drosophila melanogaster uncharacterized protein (CG3335), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG3335 ( NM_140080.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_648337.1 Drosophila melanogaster uncharacterized protein (CG3335), mRNA.

Price & Availability↑

CloneID	OFa18067
Clone ID Related Accession (Same CDS sequence)	NM_140080.2
Accession Version	NM_140080.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2757bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_140080.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTCACGAA TTATAGTCAA ACAGCTGCCC AAGCATATCA CCGAAGACAA ACTGCGTCAG 
ATTTTTGGTG CCCAGGGCAC GATTACGGAT CTGCAACTAA AATACACGCC CGATGGAAAG 
TTTCGGCAAT TTTGCTTCGT GGGTTACAGC ACCGAGGAGG AGGCCCAATC GGCCATCCGG 
CACTTTGACA ACACATGCAT TCAGACCAGC CGGGTGCGCG TCGAATCCTG TGCTGCCTTG 
GGCAGCGAAG ATAAGCCACA ATCTTGGAGC AAGTACGCCA AGGACAGCAA GAAGAACCTA 
GACAAATTGA AGGAGAAGGA AAGGGAGGCG GCTGCCAAGG CTAAGGAGTC TGAGAAAAAG 
AAGAAGAAAG ATAAAGTTGA CAAGGTGGAC CAAATTTTGA GCAGACACAA AGACGATCCG 
GAATTCCAAG AGTTTCTAGA GGCGCATGAC AAGTCGCGAA CGCTGTGGGG AAACGATTTG 
GGTATAAATA AAAATCGGGA GAACGAAGAA GAGGATGATG AGGAACAGGA AGAATCTCGA 
GCTGCCAGAG ATGACAGTGG AGTGGATGCA GATGCAGGAG ATGAGGATGG CTCAGGCGAT 
GAGGCAGATG AGGAAGAAGA CACCGATAAA CTGGCCGAAA AGCCCATCAG CGATCTTGAG 
TATATGAAAT CCCTGATGGC AACCACATCC GGCGAAGCTA CTGCAAAGAA ACCCAAAGCC 
AAGGCGGATA AATCAAATTT GGAGCTGTTC ACCATTAAAA TACACAATGT ACCATACAAC 
ACCAAGCGCC AGGAGGTGCT AAAGTTTTTC AAGCCCCTGA AACCGTACTC CGTTCGGCTG 
CCCAGCAAAG TTCACGGCTT CTGCTACGTG GGTTTTAAAA CTGAGAAAGA CATGGCCAAG 
GGAATGCTTA AAAACAAGAG TTTCATCAAG GGCAAGCAAG TATTCTTCTC CGACTTTACA 
GAGAAGAACA AGGTGACCAA AGCGAGCAAG AGTGGACAAC CATTGGCACC AGCCGCCGTC 
GATGCGGGCA ATGCGAAGTG GAAGCATCAG CAGGACAGTT TATCCAAAGA AGATGACATC 
TCCGAGTCCG GGAGGATATT CTTTCGTAAT CTAGCATACA CTACTACCGA AGAGGATCTG 
CGCAAGCTTT TCGAGCAGTT CGGTCCCGTG GTGGAGGTTA ACTTGCCCCT CGACAAGCTA 
ACGCGAAAAA TCAAGGGCTT TGGTACAGTT ACGTACATGA TGCCGGAGCA CGCATTAAAG 
GCTTTTAATA CCCTCGATGG CACTGATTTC CATGGCCGTC TCTTGCACCT TCTGCCCAGC 
AAGGACATCG AAAAGAATCC GAAAGAGGAT TTGGATGAAA ACGATGCCAG TCTGTCATTC 
AAAGAAAAGA AGGCCTTGAA ACTCAAGAAG AACGCCCAAA AACCAATTGG CTGGAACACA 
TTGTTTCTGG GTGCCAATGC TGTTGCAGAA ATTCTCGCCA AGCAATTCAA GACCTCAAAG 
GAACGCATCC TGGACACAAG CGATGGTGGC AGTAGTGCCG CCGTGCGCTT GGCTTTGGGA 
GAAACCCAAG TCGTCATCGA GATGAAGCGC TTCCTGGAGG AAGAAGGCGT TCGTCTTGAT 
GCATTTGATG AGCCCGCAAA GAAACGTTCT AACACTGTTA TACTAGCCAA GAATTTGCCA 
GCGGCCACAG AGATTTCAGA GATTACCCCC ATCTTTAGTC GATTTGGCCC AATTGGCAGG 
ATTGTGCTTC CTCCCAGTGG GGTTACGGCA CTTATCGAGT ACTGTGATCC TTTGGAGGCG 
AGGCAAGCTT TCAAGAAGTT GGCCTACAGT AAATTCAAGA ATGCCCCACT CTATTTGGAG 
TGGGCTCCCG AGCAGGTCTT TACCAAGACC CTTAGTGGAG AGCCAGTGAT TCCCAAATCG 
GAACCGAAAC CAAAGGAGGA GGTAAAGCCA GAGGAGAAAC CGATTGTAAA TGATGCGAAA 
CCTGACGAGG AGGATTCTAG GGCAGAGGAT GCCGATGATG AACCCGAACC GAATACAACA 
CTATTTCTAC GGAACCTTAA CTTTAAAACC GTACAGGAAA CCGTTGAGAA ACACTTCCGC 
CATTTGGGTA GCATTCACAC TGTTGAAATT GCTAAGCGAA GGGATCCCGA GAATCCCCGG 
GAATTCAAGT CCCTTGGCTA CGGCTTCATT CAGTTCAAGA AGTCCTCAGT GGCAGAGCAC 
GCTCTCAAGA ACTTGCAGCT CACCCACATA GATGGTAATC CCGTGGAACT GAAGCGCAGC 
GATCGTGTGC TCAAAACCCA AGATAATGAT GGCGCACAAC GTCGACTGGC CTCACAGAAG 
AAGCAAACGG GAACCAAAAT CCTGGTGCGA AATATTCCCT TCCAGGCACA ATACCGCGAG 
GTTCGAGATA TATTCAAGGC TTTTGGCGAA CTGCGATCCT TACGTATTCC TAAAAAGGCG 
ACCACGGGCG AGGATGCGCA TCGTGGTTTC GGTTTCGTTG ACTACATGTC CAAGGCGGAG 
GCCAAACGCG CCTTCGACGC CCTAAGCGCC AGTACGCATC TTTACGGTCG TCGTTTGGTG 
CTTGAGTGGA GCGCCAACGA CGACAACCAG GACGTGGAGG AGCTTCGCAA GCGAACGGCA 
GCCAAATTCG ATGGCAGTCA AGCGGCCACT GCGGCCAAAC GCAGTAGAAA ATCCTTCTTC 
GATGTGGAGG GCAGTGTGCA GCCAAATCAA GATGACGACG AAGAGGAGGA GCAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_648337.1
CDS	101..2857
Translation	MSRIIVKQLPKHITEDKLRQIFGAQGTITDLQLKYTPDGKFRQFCFVGYSTEEEAQSAIRHFDNTCIQTSRVRVESCAALGSEDKPQSWSKYAKDSKKNLDKLKEKEREAAAKAKESEKKKKKDKVDKVDQILSRHKDDPEFQEFLEAHDKSRTLWGNDLGINKNRENEEEDDEEQEESRAARDDSGVDADAGDEDGSGDEADEEEDTDKLAEKPISDLEYMKSLMATTSGEATAKKPKAKADKSNLELFTIKIHNVPYNTKRQEVLKFFKPLKPYSVRLPSKVHGFCYVGFKTEKDMAKGMLKNKSFIKGKQVFFSDFTEKNKVTKASKSGQPLAPAAVDAGNAKWKHQQDSLSKEDDISESGRIFFRNLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHALKAFNTLDGTDFHGRLLHLLPSKDIEKNPKEDLDENDASLSFKEKKALKLKKNAQKPIGWNTLFLGANAVAEILAKQFKTSKERILDTSDGGSSAAVRLALGETQVVIEMKRFLEEEGVRLDAFDEPAKKRSNTVILAKNLPAATEISEITPIFSRFGPIGRIVLPPSGVTALIEYCDPLEARQAFKKLAYSKFKNAPLYLEWAPEQVFTKTLSGEPVIPKSEPKPKEEVKPEEKPIVNDAKPDEEDSRAEDADDEPEPNTTLFLRNLNFKTVQETVEKHFRHLGSIHTVEIAKRRDPENPREFKSLGYGFIQFKKSSVAEHALKNLQLTHIDGNPVELKRSDRVLKTQDNDGAQRRLASQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRGFGFVDYMSKAEAKRAFDALSASTHLYGRRLVLEWSANDDNQDVEELRKRTAAKFDGSQAATAAKRSRKSFFDVEGSVQPNQDDDEEEEQ

Target ORF information:

RefSeq Version	NM_140080.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG3335), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_140080.2

ORF Insert Sequence:

ATGTCACGAA TTATAGTCAA ACAGCTGCCC AAGCATATCA CCGAAGACAA ACTGCGTCAG 
ATTTTTGGTG CCCAGGGCAC GATTACGGAT CTGCAACTAA AATACACGCC CGATGGAAAG 
TTTCGGCAAT TTTGCTTCGT GGGTTACAGC ACCGAGGAGG AGGCCCAATC GGCCATCCGG 
CACTTTGACA ACACATGCAT TCAGACCAGC CGGGTGCGCG TCGAATCCTG TGCTGCCTTG 
GGCAGCGAAG ATAAGCCACA ATCTTGGAGC AAGTACGCCA AGGACAGCAA GAAGAACCTA 
GACAAATTGA AGGAGAAGGA AAGGGAGGCG GCTGCCAAGG CTAAGGAGTC TGAGAAAAAG 
AAGAAGAAAG ATAAAGTTGA CAAGGTGGAC CAAATTTTGA GCAGACACAA AGACGATCCG 
GAATTCCAAG AGTTTCTAGA GGCGCATGAC AAGTCGCGAA CGCTGTGGGG AAACGATTTG 
GGTATAAATA AAAATCGGGA GAACGAAGAA GAGGATGATG AGGAACAGGA AGAATCTCGA 
GCTGCCAGAG ATGACAGTGG AGTGGATGCA GATGCAGGAG ATGAGGATGG CTCAGGCGAT 
GAGGCAGATG AGGAAGAAGA CACCGATAAA CTGGCCGAAA AGCCCATCAG CGATCTTGAG 
TATATGAAAT CCCTGATGGC AACCACATCC GGCGAAGCTA CTGCAAAGAA ACCCAAAGCC 
AAGGCGGATA AATCAAATTT GGAGCTGTTC ACCATTAAAA TACACAATGT ACCATACAAC 
ACCAAGCGCC AGGAGGTGCT AAAGTTTTTC AAGCCCCTGA AACCGTACTC CGTTCGGCTG 
CCCAGCAAAG TTCACGGCTT CTGCTACGTG GGTTTTAAAA CTGAGAAAGA CATGGCCAAG 
GGAATGCTTA AAAACAAGAG TTTCATCAAG GGCAAGCAAG TATTCTTCTC CGACTTTACA 
GAGAAGAACA AGGTGACCAA AGCGAGCAAG AGTGGACAAC CATTGGCACC AGCCGCCGTC 
GATGCGGGCA ATGCGAAGTG GAAGCATCAG CAGGACAGTT TATCCAAAGA AGATGACATC 
TCCGAGTCCG GGAGGATATT CTTTCGTAAT CTAGCATACA CTACTACCGA AGAGGATCTG 
CGCAAGCTTT TCGAGCAGTT CGGTCCCGTG GTGGAGGTTA ACTTGCCCCT CGACAAGCTA 
ACGCGAAAAA TCAAGGGCTT TGGTACAGTT ACGTACATGA TGCCGGAGCA CGCATTAAAG 
GCTTTTAATA CCCTCGATGG CACTGATTTC CATGGCCGTC TCTTGCACCT TCTGCCCAGC 
AAGGACATCG AAAAGAATCC GAAAGAGGAT TTGGATGAAA ACGATGCCAG TCTGTCATTC 
AAAGAAAAGA AGGCCTTGAA ACTCAAGAAG AACGCCCAAA AACCAATTGG CTGGAACACA 
TTGTTTCTGG GTGCCAATGC TGTTGCAGAA ATTCTCGCCA AGCAATTCAA GACCTCAAAG 
GAACGCATCC TGGACACAAG CGATGGTGGC AGTAGTGCCG CCGTGCGCTT GGCTTTGGGA 
GAAACCCAAG TCGTCATCGA GATGAAGCGC TTCCTGGAGG AAGAAGGCGT TCGTCTTGAT 
GCATTTGATG AGCCCGCAAA GAAACGTTCT AACACTGTTA TACTAGCCAA GAATTTGCCA 
GCGGCCACAG AGATTTCAGA GATTACCCCC ATCTTTAGTC GATTTGGCCC AATTGGCAGG 
ATTGTGCTTC CTCCCAGTGG GGTTACGGCA CTTATCGAGT ACTGTGATCC TTTGGAGGCG 
AGGCAAGCTT TCAAGAAGTT GGCCTACAGT AAATTCAAGA ATGCCCCACT CTATTTGGAG 
TGGGCTCCCG AGCAGGTCTT TACCAAGACC CTTAGTGGAG AGCCAGTGAT TCCCAAATCG 
GAACCGAAAC CAAAGGAGGA GGTAAAGCCA GAGGAGAAAC CGATTGTAAA TGATGCGAAA 
CCTGACGAGG AGGATTCTAG GGCAGAGGAT GCCGATGATG AACCCGAACC GAATACAACA 
CTATTTCTAC GGAACCTTAA CTTTAAAACC GTACAGGAAA CCGTTGAGAA ACACTTCCGC 
CATTTGGGTA GCATTCACAC TGTTGAAATT GCTAAGCGAA GGGATCCCGA GAATCCCCGG 
GAATTCAAGT CCCTTGGCTA CGGCTTCATT CAGTTCAAGA AGTCCTCAGT GGCAGAGCAC 
GCTCTCAAGA ACTTGCAGCT CACCCACATA GATGGTAATC CCGTGGAACT GAAGCGCAGC 
GATCGTGTGC TCAAAACCCA AGATAATGAT GGCGCACAAC GTCGACTGGC CTCACAGAAG 
AAGCAAACGG GAACCAAAAT CCTGGTGCGA AATATTCCCT TCCAGGCACA ATACCGCGAG 
GTTCGAGATA TATTCAAGGC TTTTGGCGAA CTGCGATCCT TACGTATTCC TAAAAAGGCG 
ACCACGGGCG AGGATGCGCA TCGTGGTTTC GGTTTCGTTG ACTACATGTC CAAGGCGGAG 
GCCAAACGCG CCTTCGACGC CCTAAGCGCC AGTACGCATC TTTACGGTCG TCGTTTGGTG 
CTTGAGTGGA GCGCCAACGA CGACAACCAG GACGTGGAGG AGCTTCGCAA GCGAACGGCA 
GCCAAATTCG ATGGCAGTCA AGCGGCCACT GCGGCCAAAC GCAGTAGAAA ATCCTTCTTC 
GATGTGGAGG GCAGTGTGCA GCCAAATCAA GATGACGACG AAGAGGAGGA GCAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG3335 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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