bin cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	bin
Entrez Gene ID	38766
Full Name	biniou
Synonyms	BIN,Bin,CG18647,DmFoxF,Dmbin,Dmel\CG18647,FOXF,FoxF,XIV,binI,l(3)65CEe
General protein information	Preferred Names biniou Names CG18647 gene product from transcript CG18647-RA CG18647-PA bin-PA distal W5.4 group XIV
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3L Map Location: 65D6-65D6

mRNA and Protein(s)

mRNA	Protein	Name
NM_079226.3	NP_523950.2	biniou

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	bin	NP_523950.2
Danio rerio (zebrafish)	foxf2b	XP_003200754.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Biniou regulates hand expression by direct binding to a 300 bp sequence element, located within the 3rd intron of the hand gene
Title: Hand is a direct target of the forkhead transcription factor Biniou during Drosophila visceral mesoderm differentiation.

Bagpipe and Biniou serve as direct, partially redundant, and tissue-specific activators of the terminal differentiation gene beta 3Tub60D in the visceral mesoderm
Title: The beta 3 tubulin gene is a direct target of bagpipe and biniou in the visceral mesoderm of Drosophila.

In stage 10-11 embryos, the DmFoxF protein is detected into the nuclei of cells of the presumptive visceral mesoderm. It localizes at the segmental cell clusters of the mesoderm, which will eventually develop to surround the midgut endoderm.
Title: DmFoxF, a novel Drosophila fork head factor expressed in visceral mesoderm.

The following bin gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the bin cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa17741	NM_079226.3 Latest version!	Drosophila melanogaster biniou (bin), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

bin ( NM_079226.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_523950.2 Drosophila melanogaster biniou (bin), mRNA.

Price & Availability↑

CloneID	OFa17741
Clone ID Related Accession (Same CDS sequence)	NM_079226.3
Accession Version	NM_079226.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2031bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	biniou
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jul 15, 2014 this sequence version replaced NM_079226.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGATTAAAA GTGAAGAAGC CTCCGATCGT TCGGTTATGA CCATGGATCA GCTGGGTGGC 
TACTACCACG ATCCCCGCGC CCATCCCCCT TTCAGCCACC CACATGCACA CTCCCACCCA 
CATCAACACA CCCACACTGG ACATCCATAT AGAGCTGGGA ATCTGTTAAC CGGTGGCAAT 
TACCAGGCAA TGGGTGGCGG AGAATCACCC ACGGAGCTGA TCGATGAGAA ACCGAACATC 
GGGTATATGG AGCTAAAGCA TTATATGGAC GCTACGCCCA CTGCCACGCC CGTTTCGGCA 
GCACAACATT ATAGCCTAAG TGCGCTGCAC AGCATGGGTA CACCGCCGGC ATCCTCCAGT 
CCCATACCAC CGTACGGGGT TCTAATGACT GCCCATTCGG CTGGATCCGC TTCTCCGCAA 
TCGAATTCGA AGACGCCCAC GGATCTGCCG CAGGATTTGC AGTATGCGAG CTCCAGCACA 
TCAACCGCCA AGGTGCAGCC ATTGCAGGTG CAGCTGCAGC CACTCAACCA TCAGTACGCG 
TCCACCATTA AGTACTGCTC CAACAACACC ATACTCAGTG CGAACGACTA CCAATTGCTG 
ACCAGCCAGG AGCAGGCGGG GCAACAGCAG CCGCAGCAGT TGCCAGCCCA GCAGCTCCAG 
CATTCACCAG GCGGTGGCTA CATGTCGCGC ATTTCCACAT CGCCGTCGCA GGTGATCAGC 
AATGCGCACG GCATGCCCGT GCTAAACTAC TCCAGCTCGA GTTCCTCGCC TGCCAAGTCG 
CTCAACGGTT CCGAATCCTC GCCGCCCAGT CAGAATCATC TGGAGAACAA GGTTTCGGGC 
TCAGCGGTGG TTGGTACAGG TGGTTCCAGT CAGCAGGATG CGCCGAGCAC TCCGGATACC 
ACCAAGAAGT CTGGTACCCG GCGGCCAGAG AAACCAGCAC TCAGCTATAT CAATATGATT 
GGGCATGCGA TCAAGGAATC ACCAACTGGA AAGCTAACGC TCTCCGAGAT CTACGCCTAC 
TTGCAGAAGA GCTACGAATT CTTTCGAGGA CCCTACGTGG GCTGGAAGAA CTCGGTGCGC 
CACAATCTCA GCCTGAACGA GTGCTTCAAG AAGCTGCCAA AGGGCATGGG CGTGGGCAAG 
CCGGGCAAGG GCAACTACTG GACCATTGAC GAGAACTCGG CTCATCTCTT CGAGGACGAG 
GGCAGCCTGA GGCGCCGGCC GCGTGGCTAT CGCTCCAAGA TCAAGGTGAA GCCGTATGCC 
GGCCATGCCA ATGGATACTA CGCCAGCGGC TATGGCGATG CGGGAATGGA CAATGGCAAC 
TATTACGCCT CGCCTGCCTT TGCTAGCTAC GATTACAGTG CAGCTGGAGC CACTGGCGTC 
TCGCCGGCTG GTGGTCAAGG ATTCGCCGAT CCCTGGAACG CCCATGCCGC CCACAGTGGC 
TCGTCGTCGG TGGGCGTGGG CATGGGCGTG GGTCCCCTGC CCCAGTATAC GAACATATCC 
TGCCTGGCAG CCGGAGGCAA TGTGAATGGC TCGGCTACCA CGCCCCCGCT GGCCCACTCC 
GCACTGGGAA TGGCCCCATC GGCATCATCC TCAAGTTCGC CACTGGGAGC GGCGGCGACG 
CTTCAAAGCG ATTATGCGCC AACCGCGAGT CTCGTGGCCG CTGGCTATTC CTATGCAACA 
AGTGCCGGCA GCCTGGACAA CGGCCTCCGT TCGATTTCGC TGCAGCAGCT GCCCGGATTG 
TCCAGCATCC AGCATGCCCA GGCTCAGGCC CAAGCACAGG CGCACCACCA TCACCATCAG 
CACCATGCGA GCCACCCCAG CCACAGCCAT CAGGGCCACG GATCCATGCA CCAGAATCAC 
GGCACATCAT CCACGACGCC ACCACCATCG CAGTCCGGTG GCAGCCATGG GATCGATCAT 
TCGCCCATTG ATCGCAAGCC GGCCTACCTG CCGCCCATCA GCCCGCCCCC CATGATGGTG 
GCTCTGAATG GGGGCGGTGG ATACTACGAG GGACTCAAGT ACGCCAACTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_523950.2
CDS	210..2240
Translation	MIKSEEASDRSVMTMDQLGGYYHDPRAHPPFSHPHAHSHPHQHTHTGHPYRAGNLLTGGNYQAMGGGESPTELIDEKPNIGYMELKHYMDATPTATPVSAAQHYSLSALHSMGTPPASSSPIPPYGVLMTAHSAGSASPQSNSKTPTDLPQDLQYASSSTSTAKVQPLQVQLQPLNHQYASTIKYCSNNTILSANDYQLLTSQEQAGQQQPQQLPAQQLQHSPGGGYMSRISTSPSQVISNAHGMPVLNYSSSSSSPAKSLNGSESSPPSQNHLENKVSGSAVVGTGGSSQQDAPSTPDTTKKSGTRRPEKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYRSKIKVKPYAGHANGYYASGYGDAGMDNGNYYASPAFASYDYSAAGATGVSPAGGQGFADPWNAHAAHSGSSSVGVGMGVGPLPQYTNISCLAAGGNVNGSATTPPLAHSALGMAPSASSSSSPLGAAATLQSDYAPTASLVAAGYSYATSAGSLDNGLRSISLQQLPGLSSIQHAQAQAQAQAHHHHHQHHASHPSHSHQGHGSMHQNHGTSSTTPPPSQSGGSHGIDHSPIDRKPAYLPPISPPPMMVALNGGGGYYEGLKYAN

Target ORF information:

RefSeq Version	NM_079226.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster biniou (bin), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_079226.3

ORF Insert Sequence:

ATGATTAAAA GTGAAGAAGC CTCCGATCGT TCGGTTATGA CCATGGATCA GCTGGGTGGC 
TACTACCACG ATCCCCGCGC CCATCCCCCT TTCAGCCACC CACATGCACA CTCCCACCCA 
CATCAACACA CCCACACTGG ACATCCATAT AGAGCTGGGA ATCTGTTAAC CGGTGGCAAT 
TACCAGGCAA TGGGTGGCGG AGAATCACCC ACGGAGCTGA TCGATGAGAA ACCGAACATC 
GGGTATATGG AGCTAAAGCA TTATATGGAC GCTACGCCCA CTGCCACGCC CGTTTCGGCA 
GCACAACATT ATAGCCTAAG TGCGCTGCAC AGCATGGGTA CACCGCCGGC ATCCTCCAGT 
CCCATACCAC CGTACGGGGT TCTAATGACT GCCCATTCGG CTGGATCCGC TTCTCCGCAA 
TCGAATTCGA AGACGCCCAC GGATCTGCCG CAGGATTTGC AGTATGCGAG CTCCAGCACA 
TCAACCGCCA AGGTGCAGCC ATTGCAGGTG CAGCTGCAGC CACTCAACCA TCAGTACGCG 
TCCACCATTA AGTACTGCTC CAACAACACC ATACTCAGTG CGAACGACTA CCAATTGCTG 
ACCAGCCAGG AGCAGGCGGG GCAACAGCAG CCGCAGCAGT TGCCAGCCCA GCAGCTCCAG 
CATTCACCAG GCGGTGGCTA CATGTCGCGC ATTTCCACAT CGCCGTCGCA GGTGATCAGC 
AATGCGCACG GCATGCCCGT GCTAAACTAC TCCAGCTCGA GTTCCTCGCC TGCCAAGTCG 
CTCAACGGTT CCGAATCCTC GCCGCCCAGT CAGAATCATC TGGAGAACAA GGTTTCGGGC 
TCAGCGGTGG TTGGTACAGG TGGTTCCAGT CAGCAGGATG CGCCGAGCAC TCCGGATACC 
ACCAAGAAGT CTGGTACCCG GCGGCCAGAG AAACCAGCAC TCAGCTATAT CAATATGATT 
GGGCATGCGA TCAAGGAATC ACCAACTGGA AAGCTAACGC TCTCCGAGAT CTACGCCTAC 
TTGCAGAAGA GCTACGAATT CTTTCGAGGA CCCTACGTGG GCTGGAAGAA CTCGGTGCGC 
CACAATCTCA GCCTGAACGA GTGCTTCAAG AAGCTGCCAA AGGGCATGGG CGTGGGCAAG 
CCGGGCAAGG GCAACTACTG GACCATTGAC GAGAACTCGG CTCATCTCTT CGAGGACGAG 
GGCAGCCTGA GGCGCCGGCC GCGTGGCTAT CGCTCCAAGA TCAAGGTGAA GCCGTATGCC 
GGCCATGCCA ATGGATACTA CGCCAGCGGC TATGGCGATG CGGGAATGGA CAATGGCAAC 
TATTACGCCT CGCCTGCCTT TGCTAGCTAC GATTACAGTG CAGCTGGAGC CACTGGCGTC 
TCGCCGGCTG GTGGTCAAGG ATTCGCCGAT CCCTGGAACG CCCATGCCGC CCACAGTGGC 
TCGTCGTCGG TGGGCGTGGG CATGGGCGTG GGTCCCCTGC CCCAGTATAC GAACATATCC 
TGCCTGGCAG CCGGAGGCAA TGTGAATGGC TCGGCTACCA CGCCCCCGCT GGCCCACTCC 
GCACTGGGAA TGGCCCCATC GGCATCATCC TCAAGTTCGC CACTGGGAGC GGCGGCGACG 
CTTCAAAGCG ATTATGCGCC AACCGCGAGT CTCGTGGCCG CTGGCTATTC CTATGCAACA 
AGTGCCGGCA GCCTGGACAA CGGCCTCCGT TCGATTTCGC TGCAGCAGCT GCCCGGATTG 
TCCAGCATCC AGCATGCCCA GGCTCAGGCC CAAGCACAGG CGCACCACCA TCACCATCAG 
CACCATGCGA GCCACCCCAG CCACAGCCAT CAGGGCCACG GATCCATGCA CCAGAATCAC 
GGCACATCAT CCACGACGCC ACCACCATCG CAGTCCGGTG GCAGCCATGG GATCGATCAT 
TCGCCCATTG ATCGCAAGCC GGCCTACCTG CCGCCCATCA GCCCGCCCCC CATGATGGTG 
GCTCTGAATG GGGGCGGTGG ATACTACGAG GGACTCAAGT ACGCCAACTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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bin cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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