Ctr9 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Ctr9
Entrez Gene ID	38149
Full Name	CG2469 gene product from transcript CG2469-RB
Synonyms	Ctr9,Dmel\CG2469,cg2469
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3L Map Location: 61F5-61F6

mRNA and Protein(s)

mRNA	Protein	Name
NM_176270.2	NP_788448.1	Ctr9, isoform A
NM_176271.2	NP_788449.1	Ctr9, isoform B

Pathways from BioSystems

Homologies

Caenorhabditis elegans (roundworm)	B0464.2	NP_001254998.1
Canis lupus familiaris (dog)	CTR9	XP_003639833.1
Drosophila melanogaster (fruit fly)	CG2469	NP_788448.1
Xenopus tropicalis (tropical clawed frog)	ctr9	NP_001005076.1
Bos taurus (cattle)	CTR9	NP_001192326.1
Gallus gallus (chicken)	CTR9	XP_420968.3
Danio rerio (zebrafish)	ctr9	NP_001077052.1
Rattus norvegicus (Norway rat)	Ctr9	NP_001094131.1
Oryza sativa (rice)	Os07g0476200	NP_001059625.1
Homo sapiens (human)	CTR9	NP_055448.1
Pan troglodytes (chimpanzee)	CTR9	XP_521841.3
	CTR9	XP_001094093.2
Mus musculus (house mouse)	Ctr9	NP_033457.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP001559	XP_321554.1
Arabidopsis thaliana (thale cress)	ELF8	NP_178674.6

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Ctr9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ctr9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa17133	NM_176271.2 Latest version!	Drosophila melanogaster Ctr9, transcript variant B (Ctr9), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$629.30 $899.00
OFa17133	NM_176270.2 Latest version!	Drosophila melanogaster Ctr9, transcript variant A (Ctr9), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$629.30 $899.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Ctr9 ( NM_176270.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_788448.1 Drosophila melanogaster Ctr9, transcript variant A (Ctr9), mRNA.

Price & Availability↑

CloneID	OFa17133
Clone ID Related Accession (Same CDS sequence)	NM_176270.2 , NM_176271.2
Accession Version	NM_176270.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3453bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	Ctr9, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_176270.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTCCAACT GCATAGAGAT CCCTTTGCAG GACACCGATG AGGTGATCGA GGTGGACCCG 
GATCAACTGC CCGACTGTCC AGAGGTGTTG AGCATTCTCA AGCAGGAGCG GGCGCCCCTG 
CACGTTTGGG TCAATGTGGC GCTTGCCTAC TACAAACAAA AGAAGACGGA GGACTTTGTC 
ACGCTGCTGG AGGAGTCGCG CAGCGATGAC GCCACCAAGG AGTACCGCGA CTCGGACAAG 
GACCTCATGC GTGCCCTGGA CATGCTCGCT GCCCACTATG TCCAGGAGGC GTATCGGGAG 
AAGTCCAAGG ACAAGAAACG AGAGCTCTTC ATGAAGGCCA CCAACTTGTA CACCAGTGCC 
GACAAGATTA TCATGTACGA CCAGAGCCAT CTGTTGGGCA GGGCCTACTT CTGTCTGCTG 
GAGGGCGACA AGATGGACCA GGCGGATGCC CAGTTCAACT TTGTGCTTAA CCAGTCCCCC 
TCGAATATTC CCTCCCTACT GGGAAAGGCC TGCATCGCGT TCAATCGCAA AGATTACCGT 
GGAGCGATGG CCTTCTACAA GAAGGCCTTG CGTACAAATC CAAACTGTCC TGCGAATGTG 
AGAATCGGCA TGGCCCATTG CTTCCTGAAG ATGGGCAATC CCGAGAAGGC CAAGCTAGCC 
TTTGAACGAG CGCTCCAGCT GGATCAGCAG TGTGTGGGCG CTTTGATTGG CCTGGCCGTT 
CTCAAGCTGA ATCAACTTGA GCCCGAATCC AACAAACTGG GTGTCCAGAT GCTCTCCAAG 
GCGTACACCA TCGACAATGC CAATCCCATG GTGCTCAATC ACCTGGCCAA TCACTTCTTC 
TTTAAGAAGG ACTATCAGAA AGTCCACCAC CTGGCGCTGC ACGCCTTCCA CAACACCGAG 
AACGAGGCGA TGCGAGCCGA GAGCTGTTAC CAGCTGGCCA GGAGTTTCCA TGCCCAGAGC 
GACTACGATC AGGCCTTTCA GTACTATTAC CAATCCACTC AGATTGCGCC AGCTAACTTC 
GTGCTGCCCC ATTACGGACT AGGCCAGATG TATATTTATC GAGGAGATAC AGAAAATGCC 
GCTCAGTGTT TCGAGAAAGT GCTGAAAATC CAGCCAGGCA ACTACGAGAC CATGAAGATT 
CTGGGATCCC TGTACGCACA CTCCAATTCG CAAACCAAAC GTGACATGGC CAAGACTCAC 
CTCAAGAAGG TCACCGAACA ATTTCCTGAA GACATTGAAG CCTGGATAGA ACTGGCTCAA 
ATCCTGGAGC AGAACGACCT GCAGGCCTCG CTCAGTGCTT ACGGCACAGC CTCTAGTATT 
CTTCGGGACA AGGCCAAGTA CGAGATACCC GCTGAGATTC AAAACAACGT GGCTTCACTG 
CACTACCGCC TGGGCAACTT GAAGATGGCA AAGCTCACTT TGGAGTCGGC CCTGAAGCAT 
GCAACCTCTG AGATGGACAA GGATGTAAAA TACTACGAGT CCATTCAGGT CACCATGAAG 
TACAATCTGG CCCGTCTGAA CGAGGCAATG AGTAGCTACG ATGTGGCCGA CAAGCTGTAC 
AAGGAGATCC TCAAGGAGCA TCCCAACTAT ATTGACTGCT ACTTACGGCT GGGTTGCATG 
GCAAGGGACA AGGGTCTCAT TTTCGTGGCT TCCGATTTCT TCAAGGACGC GCTGAACATC 
AACAACGACA ATCCAGATGC GAGATCACTG CTGGGAAATC TCCATTTGGC CAAGATGCAA 
TTCGCTTTGG GACAGAAGAA TTTCGAAACG ATCCTCAAGA ATCCGTCTAC TTCCACCGAC 
GCCTACTCAC TGATTGCTCT GGGAAACTTT TCGTTGCAAA CACTGCATCA GCCGAGTAGA 
GATAAGGAGA AGGAGAGGAA GCACCAGGAG AAGGCTTTGG CCATATTCAA ACAAGTTCTT 
CGCAATGATC CCCGAAATAT TTGGGCCACC AATGGAATCG GTGCCGTGCT GGCACATAAG 
GGATGCGTGA TCGAGGCGCG CGATATCTTC GCCCAGGTGC GCGAAGCCAC CGCCGACTTT 
TGCGACGTGT GGCTGAACAT TGCGCACGTT TATGTCGAAC AGAAGCAGTA CATCAGCGCT 
ATTCAGATGT ATGAGAACTG CATGAAGAAG TTCTACAAGC ACAACAACGT CGAGGTAATG 
CAATATCTGG CAAGAGCGTA TCTACGAGCC AACAAGCTGG TCGATGCCAA GGCAGTGCTA 
CTTAAGGCCC GTCGAGTTGC TCCCCAGGAC ACAGTTCTAC TCTTCAACAT AGCAGTGGTC 
CTCTCACGTT TGGCCATGGC CATACTCAAG GATGAGAAAT CTACTCTGGA AATTGTGCTG 
CAAGCTGTCC ATGAACTGGA GCTGGCTCAA AAATACTTCC AATATCTGTC CGTGCACGGG 
GATAAGAATC GCTTCAACAT TGAGGTGGCT GGCATTGAGG CAAGCACCTG CCAAGATCTT 
CTCTCTCAGG CCCAGTACCA TGTGGGCCGT GCACGTCGCA TTGACGAGGA GGAGCGCTCG 
TTGCGCCGGA AGCAGGAAGA GGAGCGCGAG GCCTTCAAAA TTAAGGTGGC GGAGCAGCGC 
AAGCGGCGCG AGGAGGAGGC AAAGACCTCC AGGGACCAGT TGTTAGCCAA GCGGCAGGAG 
TACGTGGAGA AGACCAAGAA CATGCTCATC ATTGCGGACG CTCCACCTGA AAAGGAACGC 
AAGAAGGGTG GTGGGCGAGG TCGTAAAGAT GACTACATCT CCGGTACCGA AAGCGATAAC 
GATGGAGCTC GTCGTGAGGG AGAACGTCCC TCGAAGAAGA AGGGCAAGGG GGAACGCAAA 
AAGGGTGGCG GTCGCAAGCG CAAAACGGAG AAGTACGAGA GCGACAGCGA GGAAGAGCCA 
GGTGCCAGTG GCAAGTCGGG AAAGAAGAAG GGCAAGAAGC CGAAGCCGGT TAAAGAGTCC 
AAGGAGAAGC TTTCTGCCAA GCAGCGCCTC AAGGTGCTTT CCAAGGAGAC GATCTCCACC 
AGCGAATCCG AGTCTGACGG CAAGCGCAGC AAGAGCAGAA GTAGAAGCAG GAGTCGAAAT 
CGCAGTGGTA GCCGAAGTGG CAGTGCCTCT AGAAGCGGCA GTGATCGCGA GGCTAGCCGC 
AAGCGCAGCA GGAGCAGAAG TGGATCTGGA TCTGGGAGTG ACAGTGATGA AGCAACTAAG 
CGGAAGCGCG CCAGGAATCG CATCGAATCT GGCGGGGAAT CGGATAGATC TGGGTCCCGT 
GCTCGCTCCA AGTCGAGTTC CCGTTCAAGA TCTCGATCCA AGTCCGGATC TCGATCGAGG 
TCTCGCTCCA AGTCGGGATC CCGTTCGAGA TCGCGCTCAA AGTCCGGTTC CCGCTCGAGA 
TCCCGCTCGC CGTCGGGTTC AAGATCCCGC TCTCGCTCTG GCAGCCGATC CAAGTCCGAA 
TCCCGTAGCA GATCAGGGTC CCCGGAAAAA TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_788448.1
CDS	153..3605
Translation	MSNCIEIPLQDTDEVIEVDPDQLPDCPEVLSILKQERAPLHVWVNVALAYYKQKKTEDFVTLLEESRSDDATKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKRELFMKATNLYTSADKIIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGKACIAFNRKDYRGAMAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERALQLDQQCVGALIGLAVLKLNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLSAYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKLTLESALKHATSEMDKDVKYYESIQVTMKYNLARLNEAMSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPSTSTDAYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHKGCVIEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRANKLVDAKAVLLKARRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEIVLQAVHELELAQKYFQYLSVHGDKNRFNIEVAGIEASTCQDLLSQAQYHVGRARRIDEEERSLRRKQEEEREAFKIKVAEQRKRREEEAKTSRDQLLAKRQEYVEKTKNMLIIADAPPEKERKKGGGRGRKDDYISGTESDNDGARREGERPSKKKGKGERKKGGGRKRKTEKYESDSEEEPGASGKSGKKKGKKPKPVKESKEKLSAKQRLKVLSKETISTSESESDGKRSKSRSRSRSRNRSGSRSGSASRSGSDREASRKRSRSRSGSGSGSDSDEATKRKRARNRIESGGESDRSGSRARSKSSSRSRSRSKSGSRSRSRSKSGSRSRSRSKSGSRSRSRSPSGSRSRSRSGSRSKSESRSRSGSPEK

Target ORF information:

RefSeq Version	NM_176270.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster Ctr9, transcript variant A (Ctr9), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_176270.2

ORF Insert Sequence:

ATGTCCAACT GCATAGAGAT CCCTTTGCAG GACACCGATG AGGTGATCGA GGTGGACCCG 
GATCAACTGC CCGACTGTCC AGAGGTGTTG AGCATTCTCA AGCAGGAGCG GGCGCCCCTG 
CACGTTTGGG TCAATGTGGC GCTTGCCTAC TACAAACAAA AGAAGACGGA GGACTTTGTC 
ACGCTGCTGG AGGAGTCGCG CAGCGATGAC GCCACCAAGG AGTACCGCGA CTCGGACAAG 
GACCTCATGC GTGCCCTGGA CATGCTCGCT GCCCACTATG TCCAGGAGGC GTATCGGGAG 
AAGTCCAAGG ACAAGAAACG AGAGCTCTTC ATGAAGGCCA CCAACTTGTA CACCAGTGCC 
GACAAGATTA TCATGTACGA CCAGAGCCAT CTGTTGGGCA GGGCCTACTT CTGTCTGCTG 
GAGGGCGACA AGATGGACCA GGCGGATGCC CAGTTCAACT TTGTGCTTAA CCAGTCCCCC 
TCGAATATTC CCTCCCTACT GGGAAAGGCC TGCATCGCGT TCAATCGCAA AGATTACCGT 
GGAGCGATGG CCTTCTACAA GAAGGCCTTG CGTACAAATC CAAACTGTCC TGCGAATGTG 
AGAATCGGCA TGGCCCATTG CTTCCTGAAG ATGGGCAATC CCGAGAAGGC CAAGCTAGCC 
TTTGAACGAG CGCTCCAGCT GGATCAGCAG TGTGTGGGCG CTTTGATTGG CCTGGCCGTT 
CTCAAGCTGA ATCAACTTGA GCCCGAATCC AACAAACTGG GTGTCCAGAT GCTCTCCAAG 
GCGTACACCA TCGACAATGC CAATCCCATG GTGCTCAATC ACCTGGCCAA TCACTTCTTC 
TTTAAGAAGG ACTATCAGAA AGTCCACCAC CTGGCGCTGC ACGCCTTCCA CAACACCGAG 
AACGAGGCGA TGCGAGCCGA GAGCTGTTAC CAGCTGGCCA GGAGTTTCCA TGCCCAGAGC 
GACTACGATC AGGCCTTTCA GTACTATTAC CAATCCACTC AGATTGCGCC AGCTAACTTC 
GTGCTGCCCC ATTACGGACT AGGCCAGATG TATATTTATC GAGGAGATAC AGAAAATGCC 
GCTCAGTGTT TCGAGAAAGT GCTGAAAATC CAGCCAGGCA ACTACGAGAC CATGAAGATT 
CTGGGATCCC TGTACGCACA CTCCAATTCG CAAACCAAAC GTGACATGGC CAAGACTCAC 
CTCAAGAAGG TCACCGAACA ATTTCCTGAA GACATTGAAG CCTGGATAGA ACTGGCTCAA 
ATCCTGGAGC AGAACGACCT GCAGGCCTCG CTCAGTGCTT ACGGCACAGC CTCTAGTATT 
CTTCGGGACA AGGCCAAGTA CGAGATACCC GCTGAGATTC AAAACAACGT GGCTTCACTG 
CACTACCGCC TGGGCAACTT GAAGATGGCA AAGCTCACTT TGGAGTCGGC CCTGAAGCAT 
GCAACCTCTG AGATGGACAA GGATGTAAAA TACTACGAGT CCATTCAGGT CACCATGAAG 
TACAATCTGG CCCGTCTGAA CGAGGCAATG AGTAGCTACG ATGTGGCCGA CAAGCTGTAC 
AAGGAGATCC TCAAGGAGCA TCCCAACTAT ATTGACTGCT ACTTACGGCT GGGTTGCATG 
GCAAGGGACA AGGGTCTCAT TTTCGTGGCT TCCGATTTCT TCAAGGACGC GCTGAACATC 
AACAACGACA ATCCAGATGC GAGATCACTG CTGGGAAATC TCCATTTGGC CAAGATGCAA 
TTCGCTTTGG GACAGAAGAA TTTCGAAACG ATCCTCAAGA ATCCGTCTAC TTCCACCGAC 
GCCTACTCAC TGATTGCTCT GGGAAACTTT TCGTTGCAAA CACTGCATCA GCCGAGTAGA 
GATAAGGAGA AGGAGAGGAA GCACCAGGAG AAGGCTTTGG CCATATTCAA ACAAGTTCTT 
CGCAATGATC CCCGAAATAT TTGGGCCACC AATGGAATCG GTGCCGTGCT GGCACATAAG 
GGATGCGTGA TCGAGGCGCG CGATATCTTC GCCCAGGTGC GCGAAGCCAC CGCCGACTTT 
TGCGACGTGT GGCTGAACAT TGCGCACGTT TATGTCGAAC AGAAGCAGTA CATCAGCGCT 
ATTCAGATGT ATGAGAACTG CATGAAGAAG TTCTACAAGC ACAACAACGT CGAGGTAATG 
CAATATCTGG CAAGAGCGTA TCTACGAGCC AACAAGCTGG TCGATGCCAA GGCAGTGCTA 
CTTAAGGCCC GTCGAGTTGC TCCCCAGGAC ACAGTTCTAC TCTTCAACAT AGCAGTGGTC 
CTCTCACGTT TGGCCATGGC CATACTCAAG GATGAGAAAT CTACTCTGGA AATTGTGCTG 
CAAGCTGTCC ATGAACTGGA GCTGGCTCAA AAATACTTCC AATATCTGTC CGTGCACGGG 
GATAAGAATC GCTTCAACAT TGAGGTGGCT GGCATTGAGG CAAGCACCTG CCAAGATCTT 
CTCTCTCAGG CCCAGTACCA TGTGGGCCGT GCACGTCGCA TTGACGAGGA GGAGCGCTCG 
TTGCGCCGGA AGCAGGAAGA GGAGCGCGAG GCCTTCAAAA TTAAGGTGGC GGAGCAGCGC 
AAGCGGCGCG AGGAGGAGGC AAAGACCTCC AGGGACCAGT TGTTAGCCAA GCGGCAGGAG 
TACGTGGAGA AGACCAAGAA CATGCTCATC ATTGCGGACG CTCCACCTGA AAAGGAACGC 
AAGAAGGGTG GTGGGCGAGG TCGTAAAGAT GACTACATCT CCGGTACCGA AAGCGATAAC 
GATGGAGCTC GTCGTGAGGG AGAACGTCCC TCGAAGAAGA AGGGCAAGGG GGAACGCAAA 
AAGGGTGGCG GTCGCAAGCG CAAAACGGAG AAGTACGAGA GCGACAGCGA GGAAGAGCCA 
GGTGCCAGTG GCAAGTCGGG AAAGAAGAAG GGCAAGAAGC CGAAGCCGGT TAAAGAGTCC 
AAGGAGAAGC TTTCTGCCAA GCAGCGCCTC AAGGTGCTTT CCAAGGAGAC GATCTCCACC 
AGCGAATCCG AGTCTGACGG CAAGCGCAGC AAGAGCAGAA GTAGAAGCAG GAGTCGAAAT 
CGCAGTGGTA GCCGAAGTGG CAGTGCCTCT AGAAGCGGCA GTGATCGCGA GGCTAGCCGC 
AAGCGCAGCA GGAGCAGAAG TGGATCTGGA TCTGGGAGTG ACAGTGATGA AGCAACTAAG 
CGGAAGCGCG CCAGGAATCG CATCGAATCT GGCGGGGAAT CGGATAGATC TGGGTCCCGT 
GCTCGCTCCA AGTCGAGTTC CCGTTCAAGA TCTCGATCCA AGTCCGGATC TCGATCGAGG 
TCTCGCTCCA AGTCGGGATC CCGTTCGAGA TCGCGCTCAA AGTCCGGTTC CCGCTCGAGA 
TCCCGCTCGC CGTCGGGTTC AAGATCCCGC TCTCGCTCTG GCAGCCGATC CAAGTCCGAA 
TCCCGTAGCA GATCAGGGTC CCCGGAAAAA TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ctr9 ( NM_176271.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_788449.1 Drosophila melanogaster Ctr9, transcript variant B (Ctr9), mRNA.

Price & Availability↑

CloneID	OFa17133
Clone ID Related Accession (Same CDS sequence)	NM_176270.2 , NM_176271.2
Accession Version	NM_176271.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3453bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	Ctr9, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_176271.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTCCAACT GCATAGAGAT CCCTTTGCAG GACACCGATG AGGTGATCGA GGTGGACCCG 
GATCAACTGC CCGACTGTCC AGAGGTGTTG AGCATTCTCA AGCAGGAGCG GGCGCCCCTG 
CACGTTTGGG TCAATGTGGC GCTTGCCTAC TACAAACAAA AGAAGACGGA GGACTTTGTC 
ACGCTGCTGG AGGAGTCGCG CAGCGATGAC GCCACCAAGG AGTACCGCGA CTCGGACAAG 
GACCTCATGC GTGCCCTGGA CATGCTCGCT GCCCACTATG TCCAGGAGGC GTATCGGGAG 
AAGTCCAAGG ACAAGAAACG AGAGCTCTTC ATGAAGGCCA CCAACTTGTA CACCAGTGCC 
GACAAGATTA TCATGTACGA CCAGAGCCAT CTGTTGGGCA GGGCCTACTT CTGTCTGCTG 
GAGGGCGACA AGATGGACCA GGCGGATGCC CAGTTCAACT TTGTGCTTAA CCAGTCCCCC 
TCGAATATTC CCTCCCTACT GGGAAAGGCC TGCATCGCGT TCAATCGCAA AGATTACCGT 
GGAGCGATGG CCTTCTACAA GAAGGCCTTG CGTACAAATC CAAACTGTCC TGCGAATGTG 
AGAATCGGCA TGGCCCATTG CTTCCTGAAG ATGGGCAATC CCGAGAAGGC CAAGCTAGCC 
TTTGAACGAG CGCTCCAGCT GGATCAGCAG TGTGTGGGCG CTTTGATTGG CCTGGCCGTT 
CTCAAGCTGA ATCAACTTGA GCCCGAATCC AACAAACTGG GTGTCCAGAT GCTCTCCAAG 
GCGTACACCA TCGACAATGC CAATCCCATG GTGCTCAATC ACCTGGCCAA TCACTTCTTC 
TTTAAGAAGG ACTATCAGAA AGTCCACCAC CTGGCGCTGC ACGCCTTCCA CAACACCGAG 
AACGAGGCGA TGCGAGCCGA GAGCTGTTAC CAGCTGGCCA GGAGTTTCCA TGCCCAGAGC 
GACTACGATC AGGCCTTTCA GTACTATTAC CAATCCACTC AGATTGCGCC AGCTAACTTC 
GTGCTGCCCC ATTACGGACT AGGCCAGATG TATATTTATC GAGGAGATAC AGAAAATGCC 
GCTCAGTGTT TCGAGAAAGT GCTGAAAATC CAGCCAGGCA ACTACGAGAC CATGAAGATT 
CTGGGATCCC TGTACGCACA CTCCAATTCG CAAACCAAAC GTGACATGGC CAAGACTCAC 
CTCAAGAAGG TCACCGAACA ATTTCCTGAA GACATTGAAG CCTGGATAGA ACTGGCTCAA 
ATCCTGGAGC AGAACGACCT GCAGGCCTCG CTCAGTGCTT ACGGCACAGC CTCTAGTATT 
CTTCGGGACA AGGCCAAGTA CGAGATACCC GCTGAGATTC AAAACAACGT GGCTTCACTG 
CACTACCGCC TGGGCAACTT GAAGATGGCA AAGCTCACTT TGGAGTCGGC CCTGAAGCAT 
GCAACCTCTG AGATGGACAA GGATGTAAAA TACTACGAGT CCATTCAGGT CACCATGAAG 
TACAATCTGG CCCGTCTGAA CGAGGCAATG AGTAGCTACG ATGTGGCCGA CAAGCTGTAC 
AAGGAGATCC TCAAGGAGCA TCCCAACTAT ATTGACTGCT ACTTACGGCT GGGTTGCATG 
GCAAGGGACA AGGGTCTCAT TTTCGTGGCT TCCGATTTCT TCAAGGACGC GCTGAACATC 
AACAACGACA ATCCAGATGC GAGATCACTG CTGGGAAATC TCCATTTGGC CAAGATGCAA 
TTCGCTTTGG GACAGAAGAA TTTCGAAACG ATCCTCAAGA ATCCGTCTAC TTCCACCGAC 
GCCTACTCAC TGATTGCTCT GGGAAACTTT TCGTTGCAAA CACTGCATCA GCCGAGTAGA 
GATAAGGAGA AGGAGAGGAA GCACCAGGAG AAGGCTTTGG CCATATTCAA ACAAGTTCTT 
CGCAATGATC CCCGAAATAT TTGGGCCACC AATGGAATCG GTGCCGTGCT GGCACATAAG 
GGATGCGTGA TCGAGGCGCG CGATATCTTC GCCCAGGTGC GCGAAGCCAC CGCCGACTTT 
TGCGACGTGT GGCTGAACAT TGCGCACGTT TATGTCGAAC AGAAGCAGTA CATCAGCGCT 
ATTCAGATGT ATGAGAACTG CATGAAGAAG TTCTACAAGC ACAACAACGT CGAGGTAATG 
CAATATCTGG CAAGAGCGTA TCTACGAGCC AACAAGCTGG TCGATGCCAA GGCAGTGCTA 
CTTAAGGCCC GTCGAGTTGC TCCCCAGGAC ACAGTTCTAC TCTTCAACAT AGCAGTGGTC 
CTCTCACGTT TGGCCATGGC CATACTCAAG GATGAGAAAT CTACTCTGGA AATTGTGCTG 
CAAGCTGTCC ATGAACTGGA GCTGGCTCAA AAATACTTCC AATATCTGTC CGTGCACGGG 
GATAAGAATC GCTTCAACAT TGAGGTGGCT GGCATTGAGG CAAGCACCTG CCAAGATCTT 
CTCTCTCAGG CCCAGTACCA TGTGGGCCGT GCACGTCGCA TTGACGAGGA GGAGCGCTCG 
TTGCGCCGGA AGCAGGAAGA GGAGCGCGAG GCCTTCAAAA TTAAGGTGGC GGAGCAGCGC 
AAGCGGCGCG AGGAGGAGGC AAAGACCTCC AGGGACCAGT TGTTAGCCAA GCGGCAGGAG 
TACGTGGAGA AGACCAAGAA CATGCTCATC ATTGCGGACG CTCCACCTGA AAAGGAACGC 
AAGAAGGGTG GTGGGCGAGG TCGTAAAGAT GACTACATCT CCGGTACCGA AAGCGATAAC 
GATGGAGCTC GTCGTGAGGG AGAACGTCCC TCGAAGAAGA AGGGCAAGGG GGAACGCAAA 
AAGGGTGGCG GTCGCAAGCG CAAAACGGAG AAGTACGAGA GCGACAGCGA GGAAGAGCCA 
GGTGCCAGTG GCAAGTCGGG AAAGAAGAAG GGCAAGAAGC CGAAGCCGGT TAAAGAGTCC 
AAGGAGAAGC TTTCTGCCAA GCAGCGCCTC AAGGTGCTTT CCAAGGAGAC GATCTCCACC 
AGCGAATCCG AGTCTGACGG CAAGCGCAGC AAGAGCAGAA GTAGAAGCAG GAGTCGAAAT 
CGCAGTGGTA GCCGAAGTGG CAGTGCCTCT AGAAGCGGCA GTGATCGCGA GGCTAGCCGC 
AAGCGCAGCA GGAGCAGAAG TGGATCTGGA TCTGGGAGTG ACAGTGATGA AGCAACTAAG 
CGGAAGCGCG CCAGGAATCG CATCGAATCT GGCGGGGAAT CGGATAGATC TGGGTCCCGT 
GCTCGCTCCA AGTCGAGTTC CCGTTCAAGA TCTCGATCCA AGTCCGGATC TCGATCGAGG 
TCTCGCTCCA AGTCGGGATC CCGTTCGAGA TCGCGCTCAA AGTCCGGTTC CCGCTCGAGA 
TCCCGCTCGC CGTCGGGTTC AAGATCCCGC TCTCGCTCTG GCAGCCGATC CAAGTCCGAA 
TCCCGTAGCA GATCAGGGTC CCCGGAAAAA TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_788449.1
CDS	221..3673
Translation	MSNCIEIPLQDTDEVIEVDPDQLPDCPEVLSILKQERAPLHVWVNVALAYYKQKKTEDFVTLLEESRSDDATKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKRELFMKATNLYTSADKIIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGKACIAFNRKDYRGAMAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERALQLDQQCVGALIGLAVLKLNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLSAYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKLTLESALKHATSEMDKDVKYYESIQVTMKYNLARLNEAMSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPSTSTDAYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHKGCVIEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRANKLVDAKAVLLKARRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEIVLQAVHELELAQKYFQYLSVHGDKNRFNIEVAGIEASTCQDLLSQAQYHVGRARRIDEEERSLRRKQEEEREAFKIKVAEQRKRREEEAKTSRDQLLAKRQEYVEKTKNMLIIADAPPEKERKKGGGRGRKDDYISGTESDNDGARREGERPSKKKGKGERKKGGGRKRKTEKYESDSEEEPGASGKSGKKKGKKPKPVKESKEKLSAKQRLKVLSKETISTSESESDGKRSKSRSRSRSRNRSGSRSGSASRSGSDREASRKRSRSRSGSGSGSDSDEATKRKRARNRIESGGESDRSGSRARSKSSSRSRSRSKSGSRSRSRSKSGSRSRSRSKSGSRSRSRSPSGSRSRSRSGSRSKSESRSRSGSPEK

Target ORF information:

RefSeq Version	NM_176271.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster Ctr9, transcript variant B (Ctr9), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_176271.2

ORF Insert Sequence:

ATGTCCAACT GCATAGAGAT CCCTTTGCAG GACACCGATG AGGTGATCGA GGTGGACCCG 
GATCAACTGC CCGACTGTCC AGAGGTGTTG AGCATTCTCA AGCAGGAGCG GGCGCCCCTG 
CACGTTTGGG TCAATGTGGC GCTTGCCTAC TACAAACAAA AGAAGACGGA GGACTTTGTC 
ACGCTGCTGG AGGAGTCGCG CAGCGATGAC GCCACCAAGG AGTACCGCGA CTCGGACAAG 
GACCTCATGC GTGCCCTGGA CATGCTCGCT GCCCACTATG TCCAGGAGGC GTATCGGGAG 
AAGTCCAAGG ACAAGAAACG AGAGCTCTTC ATGAAGGCCA CCAACTTGTA CACCAGTGCC 
GACAAGATTA TCATGTACGA CCAGAGCCAT CTGTTGGGCA GGGCCTACTT CTGTCTGCTG 
GAGGGCGACA AGATGGACCA GGCGGATGCC CAGTTCAACT TTGTGCTTAA CCAGTCCCCC 
TCGAATATTC CCTCCCTACT GGGAAAGGCC TGCATCGCGT TCAATCGCAA AGATTACCGT 
GGAGCGATGG CCTTCTACAA GAAGGCCTTG CGTACAAATC CAAACTGTCC TGCGAATGTG 
AGAATCGGCA TGGCCCATTG CTTCCTGAAG ATGGGCAATC CCGAGAAGGC CAAGCTAGCC 
TTTGAACGAG CGCTCCAGCT GGATCAGCAG TGTGTGGGCG CTTTGATTGG CCTGGCCGTT 
CTCAAGCTGA ATCAACTTGA GCCCGAATCC AACAAACTGG GTGTCCAGAT GCTCTCCAAG 
GCGTACACCA TCGACAATGC CAATCCCATG GTGCTCAATC ACCTGGCCAA TCACTTCTTC 
TTTAAGAAGG ACTATCAGAA AGTCCACCAC CTGGCGCTGC ACGCCTTCCA CAACACCGAG 
AACGAGGCGA TGCGAGCCGA GAGCTGTTAC CAGCTGGCCA GGAGTTTCCA TGCCCAGAGC 
GACTACGATC AGGCCTTTCA GTACTATTAC CAATCCACTC AGATTGCGCC AGCTAACTTC 
GTGCTGCCCC ATTACGGACT AGGCCAGATG TATATTTATC GAGGAGATAC AGAAAATGCC 
GCTCAGTGTT TCGAGAAAGT GCTGAAAATC CAGCCAGGCA ACTACGAGAC CATGAAGATT 
CTGGGATCCC TGTACGCACA CTCCAATTCG CAAACCAAAC GTGACATGGC CAAGACTCAC 
CTCAAGAAGG TCACCGAACA ATTTCCTGAA GACATTGAAG CCTGGATAGA ACTGGCTCAA 
ATCCTGGAGC AGAACGACCT GCAGGCCTCG CTCAGTGCTT ACGGCACAGC CTCTAGTATT 
CTTCGGGACA AGGCCAAGTA CGAGATACCC GCTGAGATTC AAAACAACGT GGCTTCACTG 
CACTACCGCC TGGGCAACTT GAAGATGGCA AAGCTCACTT TGGAGTCGGC CCTGAAGCAT 
GCAACCTCTG AGATGGACAA GGATGTAAAA TACTACGAGT CCATTCAGGT CACCATGAAG 
TACAATCTGG CCCGTCTGAA CGAGGCAATG AGTAGCTACG ATGTGGCCGA CAAGCTGTAC 
AAGGAGATCC TCAAGGAGCA TCCCAACTAT ATTGACTGCT ACTTACGGCT GGGTTGCATG 
GCAAGGGACA AGGGTCTCAT TTTCGTGGCT TCCGATTTCT TCAAGGACGC GCTGAACATC 
AACAACGACA ATCCAGATGC GAGATCACTG CTGGGAAATC TCCATTTGGC CAAGATGCAA 
TTCGCTTTGG GACAGAAGAA TTTCGAAACG ATCCTCAAGA ATCCGTCTAC TTCCACCGAC 
GCCTACTCAC TGATTGCTCT GGGAAACTTT TCGTTGCAAA CACTGCATCA GCCGAGTAGA 
GATAAGGAGA AGGAGAGGAA GCACCAGGAG AAGGCTTTGG CCATATTCAA ACAAGTTCTT 
CGCAATGATC CCCGAAATAT TTGGGCCACC AATGGAATCG GTGCCGTGCT GGCACATAAG 
GGATGCGTGA TCGAGGCGCG CGATATCTTC GCCCAGGTGC GCGAAGCCAC CGCCGACTTT 
TGCGACGTGT GGCTGAACAT TGCGCACGTT TATGTCGAAC AGAAGCAGTA CATCAGCGCT 
ATTCAGATGT ATGAGAACTG CATGAAGAAG TTCTACAAGC ACAACAACGT CGAGGTAATG 
CAATATCTGG CAAGAGCGTA TCTACGAGCC AACAAGCTGG TCGATGCCAA GGCAGTGCTA 
CTTAAGGCCC GTCGAGTTGC TCCCCAGGAC ACAGTTCTAC TCTTCAACAT AGCAGTGGTC 
CTCTCACGTT TGGCCATGGC CATACTCAAG GATGAGAAAT CTACTCTGGA AATTGTGCTG 
CAAGCTGTCC ATGAACTGGA GCTGGCTCAA AAATACTTCC AATATCTGTC CGTGCACGGG 
GATAAGAATC GCTTCAACAT TGAGGTGGCT GGCATTGAGG CAAGCACCTG CCAAGATCTT 
CTCTCTCAGG CCCAGTACCA TGTGGGCCGT GCACGTCGCA TTGACGAGGA GGAGCGCTCG 
TTGCGCCGGA AGCAGGAAGA GGAGCGCGAG GCCTTCAAAA TTAAGGTGGC GGAGCAGCGC 
AAGCGGCGCG AGGAGGAGGC AAAGACCTCC AGGGACCAGT TGTTAGCCAA GCGGCAGGAG 
TACGTGGAGA AGACCAAGAA CATGCTCATC ATTGCGGACG CTCCACCTGA AAAGGAACGC 
AAGAAGGGTG GTGGGCGAGG TCGTAAAGAT GACTACATCT CCGGTACCGA AAGCGATAAC 
GATGGAGCTC GTCGTGAGGG AGAACGTCCC TCGAAGAAGA AGGGCAAGGG GGAACGCAAA 
AAGGGTGGCG GTCGCAAGCG CAAAACGGAG AAGTACGAGA GCGACAGCGA GGAAGAGCCA 
GGTGCCAGTG GCAAGTCGGG AAAGAAGAAG GGCAAGAAGC CGAAGCCGGT TAAAGAGTCC 
AAGGAGAAGC TTTCTGCCAA GCAGCGCCTC AAGGTGCTTT CCAAGGAGAC GATCTCCACC 
AGCGAATCCG AGTCTGACGG CAAGCGCAGC AAGAGCAGAA GTAGAAGCAG GAGTCGAAAT 
CGCAGTGGTA GCCGAAGTGG CAGTGCCTCT AGAAGCGGCA GTGATCGCGA GGCTAGCCGC 
AAGCGCAGCA GGAGCAGAAG TGGATCTGGA TCTGGGAGTG ACAGTGATGA AGCAACTAAG 
CGGAAGCGCG CCAGGAATCG CATCGAATCT GGCGGGGAAT CGGATAGATC TGGGTCCCGT 
GCTCGCTCCA AGTCGAGTTC CCGTTCAAGA TCTCGATCCA AGTCCGGATC TCGATCGAGG 
TCTCGCTCCA AGTCGGGATC CCGTTCGAGA TCGCGCTCAA AGTCCGGTTC CCGCTCGAGA 
TCCCGCTCGC CGTCGGGTTC AAGATCCCGC TCTCGCTCTG GCAGCCGATC CAAGTCCGAA 
TCCCGTAGCA GATCAGGGTC CCCGGAAAAA TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Ctr9 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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