Orcokinin cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Orcokinin
Entrez Gene ID	37806
Full Name	CG13565 gene product from transcript CG13565-RA
Synonyms	BcDNA:RH09340,CG13565,CG1565,Dmel\CG13565,Orco,orcokinin
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2R Map Location: 60A13-60A13

mRNA and Protein(s)

mRNA	Protein	Name
NM_138008.4	NP_611852.2	orcokinin, isoform A
NM_001274231.2	NP_001261160.1	orcokinin, isoform B
NM_001299870.1	NP_001286799.1	orcokinin, isoform C

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Existence and differential expression of the two orcokinin isoforms in the Drosophila brain and gut.
Title: Isoform-specific expression of the neuropeptide orcokinin in Drosophila melanogaster.

The following Orcokinin gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Orcokinin cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OFa11083	NM_001299870.1 Latest version!	Drosophila melanogaster orcokinin, transcript variant C (Orcokinin), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
OFa11083	NM_001274231.2 Latest version!	Drosophila melanogaster orcokinin, transcript variant B (Orcokinin), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
OFa13220	NM_138008.4 Latest version!	Drosophila melanogaster orcokinin, transcript variant A (Orcokinin), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Orcokinin ( NM_001274231.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001261160.1 Drosophila melanogaster orcokinin, transcript variant B (Orcokinin), mRNA.

Price & Availability↑

CloneID	OFa11083
Clone ID Related Accession (Same CDS sequence)	NM_001274231.2 , NM_001299870.1
Accession Version	NM_001274231.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 384bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	orcokinin, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jul 15, 2014 this sequence version replaced NM_001274231.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAATCTAT ATGTGCTCCT GGCGGTGGTA TCGGTGTTCC TGAACTTCAT TCACGCAGCG 
CCCGGTGTGG ATATTTCCAA CGACGAACTG CTGGATGGAA AATATCTTTG TGAAGATCTG 
CCAGCGTTAA GAGAATTGTG TAACGGAAAC AGCGTGAGTT TACGACAAAC CGGACTTCCC 
AACGACGACC TTTCCACATC GCCGTTGTTT AACGAGTTTT ACAAACTCTT CCAACGAAAT 
GTAAATATAT TTCTGTCCAA AAACAAGAGC CCCGAGTCCT TGCAAGAGCG CTTCTCGAGA 
ACGGTTTCGA AGCGCGGCTT GGACAGCATT GGTGGCGGTC ATTTGATAAA GCGGACGCAG 
AGTAGACAGT TCCTAAGCGA CTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001261160.1
CDS	520..903
Translation	MNLYVLLAVVSVFLNFIHAAPGVDISNDELLDGKYLCEDLPALRELCNGNSVSLRQTGLPNDDLSTSPLFNEFYKLFQRNVNIFLSKNKSPESLQERFSRTVSKRGLDSIGGGHLIKRTQSRQFLSD

Target ORF information:

RefSeq Version	NM_001274231.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster orcokinin, transcript variant B (Orcokinin), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001274231.2

ORF Insert Sequence:

ATGAATCTAT ATGTGCTCCT GGCGGTGGTA TCGGTGTTCC TGAACTTCAT TCACGCAGCG 
CCCGGTGTGG ATATTTCCAA CGACGAACTG CTGGATGGAA AATATCTTTG TGAAGATCTG 
CCAGCGTTAA GAGAATTGTG TAACGGAAAC AGCGTGAGTT TACGACAAAC CGGACTTCCC 
AACGACGACC TTTCCACATC GCCGTTGTTT AACGAGTTTT ACAAACTCTT CCAACGAAAT 
GTAAATATAT TTCTGTCCAA AAACAAGAGC CCCGAGTCCT TGCAAGAGCG CTTCTCGAGA 
ACGGTTTCGA AGCGCGGCTT GGACAGCATT GGTGGCGGTC ATTTGATAAA GCGGACGCAG 
AGTAGACAGT TCCTAAGCGA CTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Orcokinin ( NM_001299870.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001286799.1 Drosophila melanogaster orcokinin, transcript variant C (Orcokinin), mRNA.

Price & Availability↑

CloneID	OFa11083
Clone ID Related Accession (Same CDS sequence)	NM_001274231.2 , NM_001299870.1
Accession Version	NM_001299870.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 384bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	orcokinin, isoform C
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAATCTAT ATGTGCTCCT GGCGGTGGTA TCGGTGTTCC TGAACTTCAT TCACGCAGCG 
CCCGGTGTGG ATATTTCCAA CGACGAACTG CTGGATGGAA AATATCTTTG TGAAGATCTG 
CCAGCGTTAA GAGAATTGTG TAACGGAAAC AGCGTGAGTT TACGACAAAC CGGACTTCCC 
AACGACGACC TTTCCACATC GCCGTTGTTT AACGAGTTTT ACAAACTCTT CCAACGAAAT 
GTAAATATAT TTCTGTCCAA AAACAAGAGC CCCGAGTCCT TGCAAGAGCG CTTCTCGAGA 
ACGGTTTCGA AGCGCGGCTT GGACAGCATT GGTGGCGGTC ATTTGATAAA GCGGACGCAG 
AGTAGACAGT TCCTAAGCGA CTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001286799.1
CDS	60..443
Translation	MNLYVLLAVVSVFLNFIHAAPGVDISNDELLDGKYLCEDLPALRELCNGNSVSLRQTGLPNDDLSTSPLFNEFYKLFQRNVNIFLSKNKSPESLQERFSRTVSKRGLDSIGGGHLIKRTQSRQFLSD

Target ORF information:

RefSeq Version	NM_001299870.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster orcokinin, transcript variant C (Orcokinin), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001299870.1

ORF Insert Sequence:

ATGAATCTAT ATGTGCTCCT GGCGGTGGTA TCGGTGTTCC TGAACTTCAT TCACGCAGCG 
CCCGGTGTGG ATATTTCCAA CGACGAACTG CTGGATGGAA AATATCTTTG TGAAGATCTG 
CCAGCGTTAA GAGAATTGTG TAACGGAAAC AGCGTGAGTT TACGACAAAC CGGACTTCCC 
AACGACGACC TTTCCACATC GCCGTTGTTT AACGAGTTTT ACAAACTCTT CCAACGAAAT 
GTAAATATAT TTCTGTCCAA AAACAAGAGC CCCGAGTCCT TGCAAGAGCG CTTCTCGAGA 
ACGGTTTCGA AGCGCGGCTT GGACAGCATT GGTGGCGGTC ATTTGATAAA GCGGACGCAG 
AGTAGACAGT TCCTAAGCGA CTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Orcokinin ( NM_138008.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_611852.2 Drosophila melanogaster orcokinin, transcript variant A (Orcokinin), mRNA.

Price & Availability↑

CloneID	OFa13220
Clone ID Related Accession (Same CDS sequence)	NM_138008.4
Accession Version	NM_138008.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 402bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	orcokinin, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jan 16, 2013 this sequence version replaced NM_138008.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAATCTAT ATGTGCTCCT GGCGGTGGTA TCGGTGTTCC TGAACTTCAT TCACGCAGCG 
CCCGGTGTGG ATATTTCCAA CGACGAACTG CTGGATGGAA AATATCTTTG TGAAGCTGGC 
TCGAAGAAGT ACGATGGACC GTTTATAGTG AGATTGATTT CGGCTGCCAA TGGACAAACG 
GTCGTCTGCT ACGAGTGCAG CCAGTCGGAG TTCAAGACGA AGTACTCGGT GAAGCAGTGC 
GCGGCCGGCA AGATCGGGTC TGGCCATCAC CGGGACCTGG TGCCCTACCT GGTGAGGATG 
GACCCCCTGT ACAAGGACAC CTGGAGCAGT AAGCTCAAGC GGAACTTCGA CGAGATCGAC 
AAGGCCTCCG CCAGCTTCAG CATCCTCAAC CAGCTCGTCT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_611852.2
CDS	60..461
Translation	MNLYVLLAVVSVFLNFIHAAPGVDISNDELLDGKYLCEAGSKKYDGPFIVRLISAANGQTVVCYECSQSEFKTKYSVKQCAAGKIGSGHHRDLVPYLVRMDPLYKDTWSSKLKRNFDEIDKASASFSILNQLV

Target ORF information:

RefSeq Version	NM_138008.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster orcokinin, transcript variant A (Orcokinin), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_138008.4

ORF Insert Sequence:

ATGAATCTAT ATGTGCTCCT GGCGGTGGTA TCGGTGTTCC TGAACTTCAT TCACGCAGCG 
CCCGGTGTGG ATATTTCCAA CGACGAACTG CTGGATGGAA AATATCTTTG TGAAGCTGGC 
TCGAAGAAGT ACGATGGACC GTTTATAGTG AGATTGATTT CGGCTGCCAA TGGACAAACG 
GTCGTCTGCT ACGAGTGCAG CCAGTCGGAG TTCAAGACGA AGTACTCGGT GAAGCAGTGC 
GCGGCCGGCA AGATCGGGTC TGGCCATCAC CGGGACCTGG TGCCCTACCT GGTGAGGATG 
GACCCCCTGT ACAAGGACAC CTGGAGCAGT AAGCTCAAGC GGAACTTCGA CGAGATCGAC 
AAGGCCTCCG CCAGCTTCAG CATCCTCAAC CAGCTCGTCT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Orcokinin cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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