HmgZ cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	HmgZ
Entrez Gene ID	37480
Full Name	HMG protein Z
Synonyms	BcDNA:RE28596,CG17921,Dmel\CG17921,HMG Z,HMG-Z,HMG1,HMGZ,anon-EST:Liang-1.58,clone 1.58,dHMG-Z,hmg-Z,hmgz
General protein information	Preferred Names HMG protein Z Names CG17921 gene product from transcript CG17921-RA CG17921-PA CG17921-PB CG17921-PC CG17921-PD HmgZ-PA HmgZ-PB HmgZ-PC HmgZ-PD
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2R Map Location: 57F9-57F10

mRNA and Protein(s)

mRNA	Protein	Name
NM_001299765.1	NP_001286694.1	HMG protein Z, isoform C
NM_001299766.1	NP_001286695.1	HMG protein Z, isoform D
NM_166477.2	NP_726107.1	HMG protein Z, isoform B
NM_166476.2	NP_726106.1	HMG protein Z, isoform A

Pathways from BioSystems

Homologies

Anopheles gambiae (African malaria mosquito)	AgaP_AGAP012334	XP_001238271.1
Drosophila melanogaster (fruit fly)	HmgZ	NP_726107.1
Drosophila melanogaster (fruit fly)	HmgD	NP_726109.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

A major function of the HMGZ protein in Drosophila is to participate in Brahma-dependent chromatin remodeling at a specific subset of Brahma-dependent promoters.
Title: High mobility group proteins HMGD and HMGZ interact genetically with the Brahma chromatin remodeling complex in Drosophila.

The following HmgZ gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HmgZ cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OFa10846	NM_001299766.1 Latest version!	Drosophila melanogaster HMG protein Z (HmgZ), transcript variant D, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
OFa10846	NM_166477.2 Latest version!	Drosophila melanogaster HMG protein Z (HmgZ), transcript variant B, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
OFa10846	NM_166476.2 Latest version!	Drosophila melanogaster HMG protein Z (HmgZ), transcript variant A, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
OFa10846	NM_001299765.1 Latest version!	Drosophila melanogaster HMG protein Z (HmgZ), transcript variant C, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

HmgZ ( NM_001299765.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001286694.1 Drosophila melanogaster HMG protein Z (HmgZ), transcript variant C, mRNA.

Price & Availability↑

CloneID	OFa10846
Clone ID Related Accession (Same CDS sequence)	NM_001299765.1 , NM_001299766.1 , NM_166477.2 , NM_166476.2
Accession Version	NM_001299765.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 336bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	HMG protein Z, isoform C
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAGTGGAG ATCGCCCGAA GCGTCCCCTT TCCGCCTACA TGCTGTGGCT CAACGAGACC 
CGCGAACAGA TCAAGAAGGA TAATCCCGGC AGCAAGGTGA CAGACATCGC CAAGCGGGGC 
GGAGAACTCT GGCGCGGACT GAAGGATAAG ACCGAGTGGG AGCAGAAGGC CATCAAAATG 
AAGGAGGAGT ACAACAAGGC GGTAAAGGAG TACGAGGCCA ATGGCGGCAC CGATTCGGGA 
GCGCCCAAGA AGCGAAAGAA GGCGGCCGCC AAGCCAGCCA AGAAGGCCAA GAAGAAAGAG 
TCCTCCGAGG AGGAGGAGGA GGACGAGAGC GAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001286694.1
CDS	219..554
Translation	MSGDRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEEYNKAVKEYEANGGTDSGAPKKRKKAAAKPAKKAKKKESSEEEEEDESE

Target ORF information:

RefSeq Version	NM_001299765.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster HMG protein Z (HmgZ), transcript variant C, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001299765.1

ORF Insert Sequence:

ATGAGTGGAG ATCGCCCGAA GCGTCCCCTT TCCGCCTACA TGCTGTGGCT CAACGAGACC 
CGCGAACAGA TCAAGAAGGA TAATCCCGGC AGCAAGGTGA CAGACATCGC CAAGCGGGGC 
GGAGAACTCT GGCGCGGACT GAAGGATAAG ACCGAGTGGG AGCAGAAGGC CATCAAAATG 
AAGGAGGAGT ACAACAAGGC GGTAAAGGAG TACGAGGCCA ATGGCGGCAC CGATTCGGGA 
GCGCCCAAGA AGCGAAAGAA GGCGGCCGCC AAGCCAGCCA AGAAGGCCAA GAAGAAAGAG 
TCCTCCGAGG AGGAGGAGGA GGACGAGAGC GAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

HmgZ ( NM_001299766.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001286695.1 Drosophila melanogaster HMG protein Z (HmgZ), transcript variant D, mRNA.

Price & Availability↑

CloneID	OFa10846
Clone ID Related Accession (Same CDS sequence)	NM_001299765.1 , NM_001299766.1 , NM_166477.2 , NM_166476.2
Accession Version	NM_001299766.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 336bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	HMG protein Z, isoform D
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAGTGGAG ATCGCCCGAA GCGTCCCCTT TCCGCCTACA TGCTGTGGCT CAACGAGACC 
CGCGAACAGA TCAAGAAGGA TAATCCCGGC AGCAAGGTGA CAGACATCGC CAAGCGGGGC 
GGAGAACTCT GGCGCGGACT GAAGGATAAG ACCGAGTGGG AGCAGAAGGC CATCAAAATG 
AAGGAGGAGT ACAACAAGGC GGTAAAGGAG TACGAGGCCA ATGGCGGCAC CGATTCGGGA 
GCGCCCAAGA AGCGAAAGAA GGCGGCCGCC AAGCCAGCCA AGAAGGCCAA GAAGAAAGAG 
TCCTCCGAGG AGGAGGAGGA GGACGAGAGC GAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001286695.1
CDS	298..633
Translation	MSGDRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEEYNKAVKEYEANGGTDSGAPKKRKKAAAKPAKKAKKKESSEEEEEDESE

Target ORF information:

RefSeq Version	NM_001299766.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster HMG protein Z (HmgZ), transcript variant D, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001299766.1

ORF Insert Sequence:

ATGAGTGGAG ATCGCCCGAA GCGTCCCCTT TCCGCCTACA TGCTGTGGCT CAACGAGACC 
CGCGAACAGA TCAAGAAGGA TAATCCCGGC AGCAAGGTGA CAGACATCGC CAAGCGGGGC 
GGAGAACTCT GGCGCGGACT GAAGGATAAG ACCGAGTGGG AGCAGAAGGC CATCAAAATG 
AAGGAGGAGT ACAACAAGGC GGTAAAGGAG TACGAGGCCA ATGGCGGCAC CGATTCGGGA 
GCGCCCAAGA AGCGAAAGAA GGCGGCCGCC AAGCCAGCCA AGAAGGCCAA GAAGAAAGAG 
TCCTCCGAGG AGGAGGAGGA GGACGAGAGC GAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

HmgZ ( NM_166477.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_726107.1 Drosophila melanogaster HMG protein Z (HmgZ), transcript variant B, mRNA.

Price & Availability↑

CloneID	OFa10846
Clone ID Related Accession (Same CDS sequence)	NM_001299765.1 , NM_001299766.1 , NM_166477.2 , NM_166476.2
Accession Version	NM_166477.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 336bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	HMG protein Z, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jul 15, 2014 this sequence version replaced NM_166477.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAGTGGAG ATCGCCCGAA GCGTCCCCTT TCCGCCTACA TGCTGTGGCT CAACGAGACC 
CGCGAACAGA TCAAGAAGGA TAATCCCGGC AGCAAGGTGA CAGACATCGC CAAGCGGGGC 
GGAGAACTCT GGCGCGGACT GAAGGATAAG ACCGAGTGGG AGCAGAAGGC CATCAAAATG 
AAGGAGGAGT ACAACAAGGC GGTAAAGGAG TACGAGGCCA ATGGCGGCAC CGATTCGGGA 
GCGCCCAAGA AGCGAAAGAA GGCGGCCGCC AAGCCAGCCA AGAAGGCCAA GAAGAAAGAG 
TCCTCCGAGG AGGAGGAGGA GGACGAGAGC GAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_726107.1
CDS	240..575
Translation	MSGDRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEEYNKAVKEYEANGGTDSGAPKKRKKAAAKPAKKAKKKESSEEEEEDESE

Target ORF information:

RefSeq Version	NM_166477.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster HMG protein Z (HmgZ), transcript variant B, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_166477.2

ORF Insert Sequence:

ATGAGTGGAG ATCGCCCGAA GCGTCCCCTT TCCGCCTACA TGCTGTGGCT CAACGAGACC 
CGCGAACAGA TCAAGAAGGA TAATCCCGGC AGCAAGGTGA CAGACATCGC CAAGCGGGGC 
GGAGAACTCT GGCGCGGACT GAAGGATAAG ACCGAGTGGG AGCAGAAGGC CATCAAAATG 
AAGGAGGAGT ACAACAAGGC GGTAAAGGAG TACGAGGCCA ATGGCGGCAC CGATTCGGGA 
GCGCCCAAGA AGCGAAAGAA GGCGGCCGCC AAGCCAGCCA AGAAGGCCAA GAAGAAAGAG 
TCCTCCGAGG AGGAGGAGGA GGACGAGAGC GAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

HmgZ ( NM_166476.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_726106.1 Drosophila melanogaster HMG protein Z (HmgZ), transcript variant A, mRNA.

Price & Availability↑

CloneID	OFa10846
Clone ID Related Accession (Same CDS sequence)	NM_001299765.1 , NM_001299766.1 , NM_166477.2 , NM_166476.2
Accession Version	NM_166476.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 336bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	HMG protein Z, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jul 15, 2014 this sequence version replaced NM_166476.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAGTGGAG ATCGCCCGAA GCGTCCCCTT TCCGCCTACA TGCTGTGGCT CAACGAGACC 
CGCGAACAGA TCAAGAAGGA TAATCCCGGC AGCAAGGTGA CAGACATCGC CAAGCGGGGC 
GGAGAACTCT GGCGCGGACT GAAGGATAAG ACCGAGTGGG AGCAGAAGGC CATCAAAATG 
AAGGAGGAGT ACAACAAGGC GGTAAAGGAG TACGAGGCCA ATGGCGGCAC CGATTCGGGA 
GCGCCCAAGA AGCGAAAGAA GGCGGCCGCC AAGCCAGCCA AGAAGGCCAA GAAGAAAGAG 
TCCTCCGAGG AGGAGGAGGA GGACGAGAGC GAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_726106.1
CDS	215..550
Translation	MSGDRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEEYNKAVKEYEANGGTDSGAPKKRKKAAAKPAKKAKKKESSEEEEEDESE

Target ORF information:

RefSeq Version	NM_166476.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster HMG protein Z (HmgZ), transcript variant A, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_166476.2

ORF Insert Sequence:

ATGAGTGGAG ATCGCCCGAA GCGTCCCCTT TCCGCCTACA TGCTGTGGCT CAACGAGACC 
CGCGAACAGA TCAAGAAGGA TAATCCCGGC AGCAAGGTGA CAGACATCGC CAAGCGGGGC 
GGAGAACTCT GGCGCGGACT GAAGGATAAG ACCGAGTGGG AGCAGAAGGC CATCAAAATG 
AAGGAGGAGT ACAACAAGGC GGTAAAGGAG TACGAGGCCA ATGGCGGCAC CGATTCGGGA 
GCGCCCAAGA AGCGAAAGAA GGCGGCCGCC AAGCCAGCCA AGAAGGCCAA GAAGAAAGAG 
TCCTCCGAGG AGGAGGAGGA GGACGAGAGC GAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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HmgZ cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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