Ir47a cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Ir47a
Entrez Gene ID	36095
Full Name	Ionotropic receptor 47a
Synonyms	CG12900,CG12900/CG34363,DmelIR47a,Dmel\CG12900,IR47a
General protein information	Preferred Names Ionotropic receptor 47a Names CG12900 gene product from transcript CG12900-RA CG12900-PA Ir47a-PA ionotropic receptor 47a
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2R Map Location: 47A2-47A2

mRNA and Protein(s)

mRNA	Protein	Name
NM_136736.1	NP_610580.1	ionotropic receptor 47a

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Ir47a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ir47a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa09518	NM_136736.1 Latest version!	Drosophila melanogaster ionotropic receptor 47a (Ir47a), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Ir47a ( NM_136736.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_610580.1 Drosophila melanogaster ionotropic receptor 47a (Ir47a), mRNA.

Price & Availability↑

CloneID	OFa09518
Clone ID Related Accession (Same CDS sequence)	NM_136736.1
Accession Version	NM_136736.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1782bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	ionotropic receptor 47a
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAGGCAAA TAAAACTCTT AGTCTGGTTA CTGGTCGTCG GAGTGGTTTC CTCAACGGAA 
CAACTTCAAT TCCTAAAGAA TTTCCTAGAA GCGGTGCACA AAGAGAGATC TATTTCAACT 
ATTCTTCTTA TTCAAAGGAA AGTTCATAAA AATGATTTTC TGCACGGACT TTACCCCATA 
TTCTGGCCAA TAATTTGCTT GGACGAAACT AAAAGAGTTG AACTAGTAAA CAATTTTAAC 
AAGGACTTCC TGGCACTTGT TTATATGGAA TCTGAGGCGG ATACATTGCT ACTGTCGGCA 
TTGGCTGCCG ATTTAAATCA TATTAGAGAC GCAAGGATTA TGATCTGGTT ACAGATGAGC 
CCTTCGGAAA ATTTTCTTGA TCGTATTGTT TTTCAGGCAT CTAAGCAGAA GTTCCTTAAT 
CTCGTGGTAA TAGAAAATAC ATTAAAAACT CGACGATTTT ATCCATTTCC CCAGCCAAAA 
GTTCAAGTTA TCGACAAACC TTTCGAGGAA AAAGAAATAT ATCCCGCTCT TTGGCGCAAC 
TTCATGGGCA AAAATGCAAT AGCTGTGCCC GACTTGGTGC CACCACGGAG TTTTAATTCT 
TTTGATCCAA AAACCGGTCA TAGAAGGGAA AGTGGATCTA TCTACAATGT CTTCAAAGCC 
TTTACGCAGA GATACAATAT TACCATGCTC CTGAAATGGC CGCTCATCAG AAATACTACC 
CAAGAGGAAA TTATCGGAAA AAGTGTTCGT GGAGAGATAG ACTTACCAAT AACCGGACAG 
TTGATTAGCT TTAGACACCC AAACGGAAGT AGGTCTCAGC CTCTTTTAGG AATGACAGCC 
CTATCCATTG CTGTGCCTTG CGGCCCCGAG TTGCCAATGT TTGATCGGTT CTTTTTGTTC 
TACGGACTGG CTACACCCAT CACCATAACT GGATACTATG TCCTGCTAAA CACCATAGAG 
ATCATACTTG GAACTCTGAG CGATCGAATC AAACGCCATC CAAGACGTAA GAAGATCCTG 
AATCTGGTGC TTAATCTACG GGTATTTAGT TGCATTCTGT CCCTGCCCAC TCCACAAGGG 
AATCGACTTA GATCCGTCAA GGGTCAGCTG ACCATGGTGA TGAGTATCAC AGGCCTAATT 
CTCTCCTGCA TTGTGGCAGC ACAAACGAGT ACTATTCTCA CCATGAAGCC CCAATACCGG 
CATATCAAGA ACTTTCAGGA ACTGAGCGAC AGTAACATAA CCGTGGTATG TAACCACCTT 
AACTACTTGA CCATCAAGCA GCAAATGGAC CCCAAGTTTA TGGCCAAGTT CATGCAGAAC 
ATCTGGATAG TGAACAGCAT TGAGCAGATG AAGATGATCT TTGATTTGAA TACGAGCTAT 
GCCTACCAGA CATTCTCCTA CAAAAAGGAC CCATTTACAC TGCTTCAAAT GCACACTACC 
CGTAAGGCGT TTTGCAGGAC CCCGGGCTTA GATTTGGTCA GTGGACTCGC TTATACTGCG 
GTTCTCGAAA AGAATTCGAT CTACGCACTG GCCTTGCAGG ACTACACCCT AAAGGCTTTT 
AGTGCCGGTC TTGTCTATTA CTGGGCGGAA GAGTCTATTC GGGATCTTAT CTCCACCGTG 
GGGCGTACAC AATTTGAAAA GCTACCCATT GTGATCGGCT ATCAATCTCT GAAGCTGCAG 
GATTATAATG TCTGTTGGAA GATTTTACTA ATCGGTGGGG CACTAGCCTT TTGTGTATTC 
ATCGTGGAAG TTGTCGTGGG CTTGATTAAT CGTCGAATAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_610580.1
CDS	372..2153
Translation	MRQIKLLVWLLVVGVVSSTEQLQFLKNFLEAVHKERSISTILLIQRKVHKNDFLHGLYPIFWPIICLDETKRVELVNNFNKDFLALVYMESEADTLLLSALAADLNHIRDARIMIWLQMSPSENFLDRIVFQASKQKFLNLVVIENTLKTRRFYPFPQPKVQVIDKPFEEKEIYPALWRNFMGKNAIAVPDLVPPRSFNSFDPKTGHRRESGSIYNVFKAFTQRYNITMLLKWPLIRNTTQEEIIGKSVRGEIDLPITGQLISFRHPNGSRSQPLLGMTALSIAVPCGPELPMFDRFFLFYGLATPITITGYYVLLNTIEIILGTLSDRIKRHPRRKKILNLVLNLRVFSCILSLPTPQGNRLRSVKGQLTMVMSITGLILSCIVAAQTSTILTMKPQYRHIKNFQELSDSNITVVCNHLNYLTIKQQMDPKFMAKFMQNIWIVNSIEQMKMIFDLNTSYAYQTFSYKKDPFTLLQMHTTRKAFCRTPGLDLVSGLAYTAVLEKNSIYALALQDYTLKAFSAGLVYYWAEESIRDLISTVGRTQFEKLPIVIGYQSLKLQDYNVCWKILLIGGALAFCVFIVEVVVGLINRRI

Target ORF information:

RefSeq Version	NM_136736.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster ionotropic receptor 47a (Ir47a), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_136736.1

ORF Insert Sequence:

ATGAGGCAAA TAAAACTCTT AGTCTGGTTA CTGGTCGTCG GAGTGGTTTC CTCAACGGAA 
CAACTTCAAT TCCTAAAGAA TTTCCTAGAA GCGGTGCACA AAGAGAGATC TATTTCAACT 
ATTCTTCTTA TTCAAAGGAA AGTTCATAAA AATGATTTTC TGCACGGACT TTACCCCATA 
TTCTGGCCAA TAATTTGCTT GGACGAAACT AAAAGAGTTG AACTAGTAAA CAATTTTAAC 
AAGGACTTCC TGGCACTTGT TTATATGGAA TCTGAGGCGG ATACATTGCT ACTGTCGGCA 
TTGGCTGCCG ATTTAAATCA TATTAGAGAC GCAAGGATTA TGATCTGGTT ACAGATGAGC 
CCTTCGGAAA ATTTTCTTGA TCGTATTGTT TTTCAGGCAT CTAAGCAGAA GTTCCTTAAT 
CTCGTGGTAA TAGAAAATAC ATTAAAAACT CGACGATTTT ATCCATTTCC CCAGCCAAAA 
GTTCAAGTTA TCGACAAACC TTTCGAGGAA AAAGAAATAT ATCCCGCTCT TTGGCGCAAC 
TTCATGGGCA AAAATGCAAT AGCTGTGCCC GACTTGGTGC CACCACGGAG TTTTAATTCT 
TTTGATCCAA AAACCGGTCA TAGAAGGGAA AGTGGATCTA TCTACAATGT CTTCAAAGCC 
TTTACGCAGA GATACAATAT TACCATGCTC CTGAAATGGC CGCTCATCAG AAATACTACC 
CAAGAGGAAA TTATCGGAAA AAGTGTTCGT GGAGAGATAG ACTTACCAAT AACCGGACAG 
TTGATTAGCT TTAGACACCC AAACGGAAGT AGGTCTCAGC CTCTTTTAGG AATGACAGCC 
CTATCCATTG CTGTGCCTTG CGGCCCCGAG TTGCCAATGT TTGATCGGTT CTTTTTGTTC 
TACGGACTGG CTACACCCAT CACCATAACT GGATACTATG TCCTGCTAAA CACCATAGAG 
ATCATACTTG GAACTCTGAG CGATCGAATC AAACGCCATC CAAGACGTAA GAAGATCCTG 
AATCTGGTGC TTAATCTACG GGTATTTAGT TGCATTCTGT CCCTGCCCAC TCCACAAGGG 
AATCGACTTA GATCCGTCAA GGGTCAGCTG ACCATGGTGA TGAGTATCAC AGGCCTAATT 
CTCTCCTGCA TTGTGGCAGC ACAAACGAGT ACTATTCTCA CCATGAAGCC CCAATACCGG 
CATATCAAGA ACTTTCAGGA ACTGAGCGAC AGTAACATAA CCGTGGTATG TAACCACCTT 
AACTACTTGA CCATCAAGCA GCAAATGGAC CCCAAGTTTA TGGCCAAGTT CATGCAGAAC 
ATCTGGATAG TGAACAGCAT TGAGCAGATG AAGATGATCT TTGATTTGAA TACGAGCTAT 
GCCTACCAGA CATTCTCCTA CAAAAAGGAC CCATTTACAC TGCTTCAAAT GCACACTACC 
CGTAAGGCGT TTTGCAGGAC CCCGGGCTTA GATTTGGTCA GTGGACTCGC TTATACTGCG 
GTTCTCGAAA AGAATTCGAT CTACGCACTG GCCTTGCAGG ACTACACCCT AAAGGCTTTT 
AGTGCCGGTC TTGTCTATTA CTGGGCGGAA GAGTCTATTC GGGATCTTAT CTCCACCGTG 
GGGCGTACAC AATTTGAAAA GCTACCCATT GTGATCGGCT ATCAATCTCT GAAGCTGCAG 
GATTATAATG TCTGTTGGAA GATTTTACTA ATCGGTGGGG CACTAGCCTT TTGTGTATTC 
ATCGTGGAAG TTGTCGTGGG CTTGATTAAT CGTCGAATAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Ir47a cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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