Df31 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Df31
Entrez Gene ID	35418
Full Name	Decondensation factor 31
Synonyms	BEST:LD04967,CG2207,DF 31,DF31,Dmel\CG2207,LD04967,anon-EST:Liang-1.46,anon-EST:Posey126,anon-EST:fe1A4,anon-WO0153538.53,anon1A4,clone 1.46,l(2)k05815
General protein information	Preferred Names Decondensation factor 31 Names CG2207 gene product from transcript CG2207-RF CG2207-PA CG2207-PB CG2207-PF Df31-PA Df31-PB Df31-PF anon-fast-evolving-1A4 chromatin decondensation factor 31 decondensation factor 31
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 39E3-39E3

mRNA and Protein(s)

mRNA	Protein	Name
NM_078890.4	NP_523614.1	decondensation factor 31, isoform A
NM_001032217.3	NP_001027388.1	decondensation factor 31, isoform F
NM_165388.4	NP_724350.1	decondensation factor 31, isoform B

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The binding of the Df31-snoRNA complex to chromatin results in the opening and the maintenance of accessible higher order structures of chromatin.
Title: Changes in higher order structures of chromatin by RNP complexes.

Data indicate that the interaction between Df31 and chromatin is RNA dependent.
Title: Df31 protein and snoRNAs maintain accessible higher-order structures of chromatin.

Df31 is intrinsically disordered along its entire length. Df31 is a monomeric protein, which function may benefit from having an extended and highly flexible structural state.
Title: Intrinsic structural disorder of DF31, a Drosophila protein of chromatin decondensation and remodeling activities.

Results show that the Drosophila Df31 protein interacts with histone H3 tails and promotes interstrand bridging between two independent oligonucleosome chains.
Title: The Drosophila Df31 protein interacts with histone H3 tails and promotes chromatin bridging in vitro.

The following Df31 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Df31 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OFa15135	NM_001032217.3 Latest version!	Drosophila melanogaster decondensation factor 31, transcript variant F (Df31), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
OFa15135	NM_078890.4 Latest version!	Drosophila melanogaster decondensation factor 31, transcript variant A (Df31), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
OFa15135	NM_165388.4 Latest version!	Drosophila melanogaster decondensation factor 31, transcript variant B (Df31), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Df31 ( NM_078890.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_523614.1 Drosophila melanogaster decondensation factor 31, transcript variant A (Df31), mRNA.

Price & Availability↑

CloneID	OFa15135
Clone ID Related Accession (Same CDS sequence)	NM_078890.4 , NM_001032217.3 , NM_165388.4
Accession Version	NM_078890.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 552bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	decondensation factor 31, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jan 16, 2013 this sequence version replaced NM_078890.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCTGATG TGGCTGAGCA AAAGAATGAG ACCCCTGTTG TCGAGAAGGT CGCAGCTGAG 
GAAGTTGATG CTGTGAAGAA AGATGCAGTT GCCGCCGAGG AGGTAGCAGC TGAGAAGGCG 
AGCATCACAG AAAACGGTGG CGCCGAAGAG GAGAGCGTAG CCAAGGAGAA CGGAGCCGCC 
GACAGCAGCG CGACCGAGCC CACCGACGCA GTCGATGGTG AAAAGGCGTC TGAGCCCACT 
GTTTCTTTTG CCGCCGATAA GGATGAGAAG AAGGACGAGG ATAAAAAAGA GGATTCCGCT 
GCCGATGGGG AGGACACCAA AAAAGAGAGC AGCGAAGCTG TTCTACCTGC TGTCGAGAAT 
GGCTCCGAGG AGGTCACCAA CGGTGACTCA ACAGATGCTC CCGCCATTGA GGCTGTAAAG 
CGGAAGGTGG ATGAGGCTGC AGCCAAGGCA GATGAGGCCG TCGCCACGCC GGAGAAAAAG 
GCTAAGCTTG ATGAGGCCAG CACAAAGGAT GAGGTTCAGA ATGGGGCCGA GGCTAGCGAA 
GTGGCCGCCT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_523614.1
CDS	241..792
Translation	MADVAEQKNETPVVEKVAAEEVDAVKKDAVAAEEVAAEKASITENGGAEEESVAKENGAADSSATEPTDAVDGEKASEPTVSFAADKDEKKDEDKKEDSAADGEDTKKESSEAVLPAVENGSEEVTNGDSTDAPAIEAVKRKVDEAAAKADEAVATPEKKAKLDEASTKDEVQNGAEASEVAA

Target ORF information:

RefSeq Version	NM_078890.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster decondensation factor 31, transcript variant A (Df31), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_078890.4

ORF Insert Sequence:

ATGGCTGATG TGGCTGAGCA AAAGAATGAG ACCCCTGTTG TCGAGAAGGT CGCAGCTGAG 
GAAGTTGATG CTGTGAAGAA AGATGCAGTT GCCGCCGAGG AGGTAGCAGC TGAGAAGGCG 
AGCATCACAG AAAACGGTGG CGCCGAAGAG GAGAGCGTAG CCAAGGAGAA CGGAGCCGCC 
GACAGCAGCG CGACCGAGCC CACCGACGCA GTCGATGGTG AAAAGGCGTC TGAGCCCACT 
GTTTCTTTTG CCGCCGATAA GGATGAGAAG AAGGACGAGG ATAAAAAAGA GGATTCCGCT 
GCCGATGGGG AGGACACCAA AAAAGAGAGC AGCGAAGCTG TTCTACCTGC TGTCGAGAAT 
GGCTCCGAGG AGGTCACCAA CGGTGACTCA ACAGATGCTC CCGCCATTGA GGCTGTAAAG 
CGGAAGGTGG ATGAGGCTGC AGCCAAGGCA GATGAGGCCG TCGCCACGCC GGAGAAAAAG 
GCTAAGCTTG ATGAGGCCAG CACAAAGGAT GAGGTTCAGA ATGGGGCCGA GGCTAGCGAA 
GTGGCCGCCT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Df31 ( NM_001032217.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001027388.1 Drosophila melanogaster decondensation factor 31, transcript variant F (Df31), mRNA.

Price & Availability↑

CloneID	OFa15135
Clone ID Related Accession (Same CDS sequence)	NM_078890.4 , NM_001032217.3 , NM_165388.4
Accession Version	NM_001032217.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 552bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	decondensation factor 31, isoform F
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jan 16, 2013 this sequence version replaced NM_001032217.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCTGATG TGGCTGAGCA AAAGAATGAG ACCCCTGTTG TCGAGAAGGT CGCAGCTGAG 
GAAGTTGATG CTGTGAAGAA AGATGCAGTT GCCGCCGAGG AGGTAGCAGC TGAGAAGGCG 
AGCATCACAG AAAACGGTGG CGCCGAAGAG GAGAGCGTAG CCAAGGAGAA CGGAGCCGCC 
GACAGCAGCG CGACCGAGCC CACCGACGCA GTCGATGGTG AAAAGGCGTC TGAGCCCACT 
GTTTCTTTTG CCGCCGATAA GGATGAGAAG AAGGACGAGG ATAAAAAAGA GGATTCCGCT 
GCCGATGGGG AGGACACCAA AAAAGAGAGC AGCGAAGCTG TTCTACCTGC TGTCGAGAAT 
GGCTCCGAGG AGGTCACCAA CGGTGACTCA ACAGATGCTC CCGCCATTGA GGCTGTAAAG 
CGGAAGGTGG ATGAGGCTGC AGCCAAGGCA GATGAGGCCG TCGCCACGCC GGAGAAAAAG 
GCTAAGCTTG ATGAGGCCAG CACAAAGGAT GAGGTTCAGA ATGGGGCCGA GGCTAGCGAA 
GTGGCCGCCT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001027388.1
CDS	241..792
Translation	MADVAEQKNETPVVEKVAAEEVDAVKKDAVAAEEVAAEKASITENGGAEEESVAKENGAADSSATEPTDAVDGEKASEPTVSFAADKDEKKDEDKKEDSAADGEDTKKESSEAVLPAVENGSEEVTNGDSTDAPAIEAVKRKVDEAAAKADEAVATPEKKAKLDEASTKDEVQNGAEASEVAA

Target ORF information:

RefSeq Version	NM_001032217.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster decondensation factor 31, transcript variant F (Df31), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001032217.3

ORF Insert Sequence:

ATGGCTGATG TGGCTGAGCA AAAGAATGAG ACCCCTGTTG TCGAGAAGGT CGCAGCTGAG 
GAAGTTGATG CTGTGAAGAA AGATGCAGTT GCCGCCGAGG AGGTAGCAGC TGAGAAGGCG 
AGCATCACAG AAAACGGTGG CGCCGAAGAG GAGAGCGTAG CCAAGGAGAA CGGAGCCGCC 
GACAGCAGCG CGACCGAGCC CACCGACGCA GTCGATGGTG AAAAGGCGTC TGAGCCCACT 
GTTTCTTTTG CCGCCGATAA GGATGAGAAG AAGGACGAGG ATAAAAAAGA GGATTCCGCT 
GCCGATGGGG AGGACACCAA AAAAGAGAGC AGCGAAGCTG TTCTACCTGC TGTCGAGAAT 
GGCTCCGAGG AGGTCACCAA CGGTGACTCA ACAGATGCTC CCGCCATTGA GGCTGTAAAG 
CGGAAGGTGG ATGAGGCTGC AGCCAAGGCA GATGAGGCCG TCGCCACGCC GGAGAAAAAG 
GCTAAGCTTG ATGAGGCCAG CACAAAGGAT GAGGTTCAGA ATGGGGCCGA GGCTAGCGAA 
GTGGCCGCCT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Df31 ( NM_165388.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_724350.1 Drosophila melanogaster decondensation factor 31, transcript variant B (Df31), mRNA.

Price & Availability↑

CloneID	OFa15135
Clone ID Related Accession (Same CDS sequence)	NM_078890.4 , NM_001032217.3 , NM_165388.4
Accession Version	NM_165388.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 552bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	decondensation factor 31, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jan 16, 2013 this sequence version replaced NM_165388.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCTGATG TGGCTGAGCA AAAGAATGAG ACCCCTGTTG TCGAGAAGGT CGCAGCTGAG 
GAAGTTGATG CTGTGAAGAA AGATGCAGTT GCCGCCGAGG AGGTAGCAGC TGAGAAGGCG 
AGCATCACAG AAAACGGTGG CGCCGAAGAG GAGAGCGTAG CCAAGGAGAA CGGAGCCGCC 
GACAGCAGCG CGACCGAGCC CACCGACGCA GTCGATGGTG AAAAGGCGTC TGAGCCCACT 
GTTTCTTTTG CCGCCGATAA GGATGAGAAG AAGGACGAGG ATAAAAAAGA GGATTCCGCT 
GCCGATGGGG AGGACACCAA AAAAGAGAGC AGCGAAGCTG TTCTACCTGC TGTCGAGAAT 
GGCTCCGAGG AGGTCACCAA CGGTGACTCA ACAGATGCTC CCGCCATTGA GGCTGTAAAG 
CGGAAGGTGG ATGAGGCTGC AGCCAAGGCA GATGAGGCCG TCGCCACGCC GGAGAAAAAG 
GCTAAGCTTG ATGAGGCCAG CACAAAGGAT GAGGTTCAGA ATGGGGCCGA GGCTAGCGAA 
GTGGCCGCCT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_724350.1
CDS	133..684
Translation	MADVAEQKNETPVVEKVAAEEVDAVKKDAVAAEEVAAEKASITENGGAEEESVAKENGAADSSATEPTDAVDGEKASEPTVSFAADKDEKKDEDKKEDSAADGEDTKKESSEAVLPAVENGSEEVTNGDSTDAPAIEAVKRKVDEAAAKADEAVATPEKKAKLDEASTKDEVQNGAEASEVAA

Target ORF information:

RefSeq Version	NM_165388.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster decondensation factor 31, transcript variant B (Df31), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_165388.4

ORF Insert Sequence:

ATGGCTGATG TGGCTGAGCA AAAGAATGAG ACCCCTGTTG TCGAGAAGGT CGCAGCTGAG 
GAAGTTGATG CTGTGAAGAA AGATGCAGTT GCCGCCGAGG AGGTAGCAGC TGAGAAGGCG 
AGCATCACAG AAAACGGTGG CGCCGAAGAG GAGAGCGTAG CCAAGGAGAA CGGAGCCGCC 
GACAGCAGCG CGACCGAGCC CACCGACGCA GTCGATGGTG AAAAGGCGTC TGAGCCCACT 
GTTTCTTTTG CCGCCGATAA GGATGAGAAG AAGGACGAGG ATAAAAAAGA GGATTCCGCT 
GCCGATGGGG AGGACACCAA AAAAGAGAGC AGCGAAGCTG TTCTACCTGC TGTCGAGAAT 
GGCTCCGAGG AGGTCACCAA CGGTGACTCA ACAGATGCTC CCGCCATTGA GGCTGTAAAG 
CGGAAGGTGG ATGAGGCTGC AGCCAAGGCA GATGAGGCCG TCGCCACGCC GGAGAAAAAG 
GCTAAGCTTG ATGAGGCCAG CACAAAGGAT GAGGTTCAGA ATGGGGCCGA GGCTAGCGAA 
GTGGCCGCCT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Df31 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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