cad cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	cad
Entrez Gene ID	35341
Full Name	caudal
Synonyms	38E.19,CAD,CG1759,Cad,Dmel\CG1759,S67,anon-WO2004063362.83,cd
General protein information	Preferred Names caudal Names CG1759 gene product from transcript CG1759-RC CG1759-PA CG1759-PB CG1759-PC cad-PA cad-PB cad-PC
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 38E9-38E10

mRNA and Protein(s)

mRNA	Protein	Name
NM_057606.6	NP_476954.1	caudal, isoform A
NM_134301.4	NP_599128.1	caudal, isoform B
NM_001273712.1	NP_001260641.1	caudal, isoform C

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	cad	NP_476954.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP009646	XP_318681.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

In this study, ChIP/chip datasets are analyzed using the corresponding PWMs for the well-studied TFs; CAUDAL, HUNCHBACK, KNIRPS and KRUPPEL, to determine the distribution of predicted binding sites. All four TFs are critical regulators of gene expression along the anterio-posterior axis in early Drosophila development
Title: Spatial distribution of predicted transcription factor binding sites in Drosophila ChIP peaks.

Using a systematic series of deletion mutants (all containing the intact DNA-binding homeodomain) we discovered that the C-terminal region of Caudal contributes to the preferential activation of the fushi tarazu (ftz) Caudal target gene.
Title: Structure-Function Analysis of the Drosophila melanogaster Caudal Transcription Factor Provides Insights into Core Promoter-preferential Activation.

Abdominal-B and caudal inhibit the formation of specific neuroblasts in the Drosophila tail region.
Title: Abdominal-B and caudal inhibit the formation of specific neuroblasts in the Drosophila tail region.

Bicoid acts through a 63 nt response element in the caudal 3' untranslated region that includes a single miR-2 target site. Four predicted Bicoid splice isoforms are capable of caudal repression; all require the microRNA target for repression.
Title: MicroRNAs act as cofactors in bicoid-mediated translational repression.

Bicoid recruits Bin3 to the caudal 3' UTR.
Title: The Bin3 RNA methyltransferase is required for repression of caudal translation in the Drosophila embryo.

The following cad gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cad cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OFa15060	NM_057606.6 Latest version!	Drosophila melanogaster caudal (cad), transcript variant A, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$258.30 $369.00
OFa15060	NM_134301.4 Latest version!	Drosophila melanogaster caudal (cad), transcript variant B, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$258.30 $369.00
OFa16951	NM_001273712.1 Latest version!	Drosophila melanogaster caudal (cad), transcript variant C, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$258.30 $369.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

cad ( NM_057606.6 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_476954.1 Drosophila melanogaster caudal (cad), transcript variant A, mRNA.

Price & Availability↑

CloneID	OFa15060
Clone ID Related Accession (Same CDS sequence)	NM_057606.6 , NM_134301.4
Accession Version	NM_057606.6 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1284bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	caudal, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jan 16, 2013 this sequence version replaced NM_057606.5. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGTTTCGC ACTACTACAA CACACTGCCC TACACACAAA AGCACAGTGC CGCCAATTTG 
GCCTATGCCT CAGCGGCGGG CCAGCCATGG AACTGGACGC CCAACTACCA CCACACGCCG 
CCGAACCACC AGTTCCTGGG CGATGTGGAC TCCTCGCATG CCGCCCACCA CGCGGCCGCT 
GCCCACCAGA TGTACTACAA CTCCCATCAC ATGTTCCACT CGGCGGCGGC GGCCTCTGCC 
GGGGAGTGGC ACTCACCCGC CTCGAGCACG GCGGATAACT TCGTTCAGAA TGTGCCCACG 
TCGGCCCACC AGCTGATGCA GCAGCACCAC CATCATCACG CCCATGCCTC CAGCAGTTCC 
GCCAGTTCCG GGAGCAGCAG TAGCGGTGGT GCACCGGGTG CGCCCCAGCT CAACGAGACC 
AACAGCAGCA TCGGCGTCGG AGGAGCAGGC GGTGGCGGTG GTGTTGGCGG GGCCACCGAT 
GGAGGACCAG GTTCCGCACC ACCCAACCAT CAGCAGCACA TCGCCGAAGG TCTGCCGTCG 
CCACCGATTA CCGTTTCGGG CTCGGAAATC TCTAGCCCGG GGGCGCCGAC TTCTGCCTCG 
TCGCCGCATC ATCACTTGGC ACACCATTTG AGTGCCGTCG CCAACAACAA CAACAACAAC 
AACAACAACA ACAATAGCCC ATCCACCCAT AACAACAACA ACAATAACAA TTCGGTGAGC 
AACAACAACA GGACATCGCC ATCGAAGCCG CCATACTTCG ACTGGATGAA GAAGCCCGCC 
TATCCAGCAC AACCACAACC AGGCAAAACC CGCACCAAGG ATAAGTACCG CGTGGTGTAC 
ACCGACTTCC AGCGCCTGGA GCTGGAGAAG GAGTACTGCA CCTCCCGCTA CATCACCATC 
CGGCGGAAGA GCGAGCTCGC CCAGACGCTG TCGCTGTCGG AGCGCCAGGT TAAGATCTGG 
TTCCAGAACC GCCGCGCCAA GGAGCGCAAG CAGAACAAGA AGGGTAGCGA TCCGAACGTG 
ATGGGCGTGG GAGTGCAGCA TGCGGACTAC AGCCAGCTGC TGGACGCCAA AGCGAAGCTG 
GAGCCGGGCC TGCACCTGTC CCACTCGCTG GCCCACTCGA TGAACCCCAT GGCGGCGATG 
AACATTCCCG CCATGCGCCT GCATCCCCAC CTGGCCGCCC ACAGCCACTC CTTGGCGGCG 
GTGGCGGCGC ACTCACACCA GCTGCAGCAG CAGCACAGTG CGCAGATGTC CGCTGCGGCG 
GCAGTGGGCA CGCTCTCGAT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_476954.1
CDS	378..1661
Translation	MVSHYYNTLPYTQKHSAANLAYASAAGQPWNWTPNYHHTPPNHQFLGDVDSSHAAHHAAAAHQMYYNSHHMFHSAAAASAGEWHSPASSTADNFVQNVPTSAHQLMQQHHHHHAHASSSSASSGSSSSGGAPGAPQLNETNSSIGVGGAGGGGGVGGATDGGPGSAPPNHQQHIAEGLPSPPITVSGSEISSPGAPTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPNVMGVGVQHADYSQLLDAKAKLEPGLHLSHSLAHSMNPMAAMNIPAMRLHPHLAAHSHSLAAVAAHSHQLQQQHSAQMSAAAAVGTLSM

Target ORF information:

RefSeq Version	NM_057606.6
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster caudal (cad), transcript variant A, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_057606.6

ORF Insert Sequence:

ATGGTTTCGC ACTACTACAA CACACTGCCC TACACACAAA AGCACAGTGC CGCCAATTTG 
GCCTATGCCT CAGCGGCGGG CCAGCCATGG AACTGGACGC CCAACTACCA CCACACGCCG 
CCGAACCACC AGTTCCTGGG CGATGTGGAC TCCTCGCATG CCGCCCACCA CGCGGCCGCT 
GCCCACCAGA TGTACTACAA CTCCCATCAC ATGTTCCACT CGGCGGCGGC GGCCTCTGCC 
GGGGAGTGGC ACTCACCCGC CTCGAGCACG GCGGATAACT TCGTTCAGAA TGTGCCCACG 
TCGGCCCACC AGCTGATGCA GCAGCACCAC CATCATCACG CCCATGCCTC CAGCAGTTCC 
GCCAGTTCCG GGAGCAGCAG TAGCGGTGGT GCACCGGGTG CGCCCCAGCT CAACGAGACC 
AACAGCAGCA TCGGCGTCGG AGGAGCAGGC GGTGGCGGTG GTGTTGGCGG GGCCACCGAT 
GGAGGACCAG GTTCCGCACC ACCCAACCAT CAGCAGCACA TCGCCGAAGG TCTGCCGTCG 
CCACCGATTA CCGTTTCGGG CTCGGAAATC TCTAGCCCGG GGGCGCCGAC TTCTGCCTCG 
TCGCCGCATC ATCACTTGGC ACACCATTTG AGTGCCGTCG CCAACAACAA CAACAACAAC 
AACAACAACA ACAATAGCCC ATCCACCCAT AACAACAACA ACAATAACAA TTCGGTGAGC 
AACAACAACA GGACATCGCC ATCGAAGCCG CCATACTTCG ACTGGATGAA GAAGCCCGCC 
TATCCAGCAC AACCACAACC AGGCAAAACC CGCACCAAGG ATAAGTACCG CGTGGTGTAC 
ACCGACTTCC AGCGCCTGGA GCTGGAGAAG GAGTACTGCA CCTCCCGCTA CATCACCATC 
CGGCGGAAGA GCGAGCTCGC CCAGACGCTG TCGCTGTCGG AGCGCCAGGT TAAGATCTGG 
TTCCAGAACC GCCGCGCCAA GGAGCGCAAG CAGAACAAGA AGGGTAGCGA TCCGAACGTG 
ATGGGCGTGG GAGTGCAGCA TGCGGACTAC AGCCAGCTGC TGGACGCCAA AGCGAAGCTG 
GAGCCGGGCC TGCACCTGTC CCACTCGCTG GCCCACTCGA TGAACCCCAT GGCGGCGATG 
AACATTCCCG CCATGCGCCT GCATCCCCAC CTGGCCGCCC ACAGCCACTC CTTGGCGGCG 
GTGGCGGCGC ACTCACACCA GCTGCAGCAG CAGCACAGTG CGCAGATGTC CGCTGCGGCG 
GCAGTGGGCA CGCTCTCGAT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

cad ( NM_134301.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_599128.1 Drosophila melanogaster caudal (cad), transcript variant B, mRNA.

Price & Availability↑

CloneID	OFa15060
Clone ID Related Accession (Same CDS sequence)	NM_057606.6 , NM_134301.4
Accession Version	NM_134301.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1284bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	caudal, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On May 8, 2012 this sequence version replaced NM_134301.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGTTTCGC ACTACTACAA CACACTGCCC TACACACAAA AGCACAGTGC CGCCAATTTG 
GCCTATGCCT CAGCGGCGGG CCAGCCATGG AACTGGACGC CCAACTACCA CCACACGCCG 
CCGAACCACC AGTTCCTGGG CGATGTGGAC TCCTCGCATG CCGCCCACCA CGCGGCCGCT 
GCCCACCAGA TGTACTACAA CTCCCATCAC ATGTTCCACT CGGCGGCGGC GGCCTCTGCC 
GGGGAGTGGC ACTCACCCGC CTCGAGCACG GCGGATAACT TCGTTCAGAA TGTGCCCACG 
TCGGCCCACC AGCTGATGCA GCAGCACCAC CATCATCACG CCCATGCCTC CAGCAGTTCC 
GCCAGTTCCG GGAGCAGCAG TAGCGGTGGT GCACCGGGTG CGCCCCAGCT CAACGAGACC 
AACAGCAGCA TCGGCGTCGG AGGAGCAGGC GGTGGCGGTG GTGTTGGCGG GGCCACCGAT 
GGAGGACCAG GTTCCGCACC ACCCAACCAT CAGCAGCACA TCGCCGAAGG TCTGCCGTCG 
CCACCGATTA CCGTTTCGGG CTCGGAAATC TCTAGCCCGG GGGCGCCGAC TTCTGCCTCG 
TCGCCGCATC ATCACTTGGC ACACCATTTG AGTGCCGTCG CCAACAACAA CAACAACAAC 
AACAACAACA ACAATAGCCC ATCCACCCAT AACAACAACA ACAATAACAA TTCGGTGAGC 
AACAACAACA GGACATCGCC ATCGAAGCCG CCATACTTCG ACTGGATGAA GAAGCCCGCC 
TATCCAGCAC AACCACAACC AGGCAAAACC CGCACCAAGG ATAAGTACCG CGTGGTGTAC 
ACCGACTTCC AGCGCCTGGA GCTGGAGAAG GAGTACTGCA CCTCCCGCTA CATCACCATC 
CGGCGGAAGA GCGAGCTCGC CCAGACGCTG TCGCTGTCGG AGCGCCAGGT TAAGATCTGG 
TTCCAGAACC GCCGCGCCAA GGAGCGCAAG CAGAACAAGA AGGGTAGCGA TCCGAACGTG 
ATGGGCGTGG GAGTGCAGCA TGCGGACTAC AGCCAGCTGC TGGACGCCAA AGCGAAGCTG 
GAGCCGGGCC TGCACCTGTC CCACTCGCTG GCCCACTCGA TGAACCCCAT GGCGGCGATG 
AACATTCCCG CCATGCGCCT GCATCCCCAC CTGGCCGCCC ACAGCCACTC CTTGGCGGCG 
GTGGCGGCGC ACTCACACCA GCTGCAGCAG CAGCACAGTG CGCAGATGTC CGCTGCGGCG 
GCAGTGGGCA CGCTCTCGAT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_599128.1
CDS	215..1498
Translation	MVSHYYNTLPYTQKHSAANLAYASAAGQPWNWTPNYHHTPPNHQFLGDVDSSHAAHHAAAAHQMYYNSHHMFHSAAAASAGEWHSPASSTADNFVQNVPTSAHQLMQQHHHHHAHASSSSASSGSSSSGGAPGAPQLNETNSSIGVGGAGGGGGVGGATDGGPGSAPPNHQQHIAEGLPSPPITVSGSEISSPGAPTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPNVMGVGVQHADYSQLLDAKAKLEPGLHLSHSLAHSMNPMAAMNIPAMRLHPHLAAHSHSLAAVAAHSHQLQQQHSAQMSAAAAVGTLSM

Target ORF information:

RefSeq Version	NM_134301.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster caudal (cad), transcript variant B, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_134301.4

ORF Insert Sequence:

ATGGTTTCGC ACTACTACAA CACACTGCCC TACACACAAA AGCACAGTGC CGCCAATTTG 
GCCTATGCCT CAGCGGCGGG CCAGCCATGG AACTGGACGC CCAACTACCA CCACACGCCG 
CCGAACCACC AGTTCCTGGG CGATGTGGAC TCCTCGCATG CCGCCCACCA CGCGGCCGCT 
GCCCACCAGA TGTACTACAA CTCCCATCAC ATGTTCCACT CGGCGGCGGC GGCCTCTGCC 
GGGGAGTGGC ACTCACCCGC CTCGAGCACG GCGGATAACT TCGTTCAGAA TGTGCCCACG 
TCGGCCCACC AGCTGATGCA GCAGCACCAC CATCATCACG CCCATGCCTC CAGCAGTTCC 
GCCAGTTCCG GGAGCAGCAG TAGCGGTGGT GCACCGGGTG CGCCCCAGCT CAACGAGACC 
AACAGCAGCA TCGGCGTCGG AGGAGCAGGC GGTGGCGGTG GTGTTGGCGG GGCCACCGAT 
GGAGGACCAG GTTCCGCACC ACCCAACCAT CAGCAGCACA TCGCCGAAGG TCTGCCGTCG 
CCACCGATTA CCGTTTCGGG CTCGGAAATC TCTAGCCCGG GGGCGCCGAC TTCTGCCTCG 
TCGCCGCATC ATCACTTGGC ACACCATTTG AGTGCCGTCG CCAACAACAA CAACAACAAC 
AACAACAACA ACAATAGCCC ATCCACCCAT AACAACAACA ACAATAACAA TTCGGTGAGC 
AACAACAACA GGACATCGCC ATCGAAGCCG CCATACTTCG ACTGGATGAA GAAGCCCGCC 
TATCCAGCAC AACCACAACC AGGCAAAACC CGCACCAAGG ATAAGTACCG CGTGGTGTAC 
ACCGACTTCC AGCGCCTGGA GCTGGAGAAG GAGTACTGCA CCTCCCGCTA CATCACCATC 
CGGCGGAAGA GCGAGCTCGC CCAGACGCTG TCGCTGTCGG AGCGCCAGGT TAAGATCTGG 
TTCCAGAACC GCCGCGCCAA GGAGCGCAAG CAGAACAAGA AGGGTAGCGA TCCGAACGTG 
ATGGGCGTGG GAGTGCAGCA TGCGGACTAC AGCCAGCTGC TGGACGCCAA AGCGAAGCTG 
GAGCCGGGCC TGCACCTGTC CCACTCGCTG GCCCACTCGA TGAACCCCAT GGCGGCGATG 
AACATTCCCG CCATGCGCCT GCATCCCCAC CTGGCCGCCC ACAGCCACTC CTTGGCGGCG 
GTGGCGGCGC ACTCACACCA GCTGCAGCAG CAGCACAGTG CGCAGATGTC CGCTGCGGCG 
GCAGTGGGCA CGCTCTCGAT GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

cad ( NM_001273712.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001260641.1 Drosophila melanogaster caudal (cad), transcript variant C, mRNA.

Price & Availability↑

CloneID	OFa16951
Clone ID Related Accession (Same CDS sequence)	NM_001273712.1
Accession Version	NM_001273712.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1338bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	caudal, isoform C
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGTTTCGC ACTACTACAA CACACTGCCC TACACACAAA AGCACAGTGC CGCCAATTTG 
GCCTATGCCT CAGCGGCGGG CCAGCCATGG AACTGGACGC CCAACTACCA CCACACGCCG 
CCGAACCACC AGTTCCTGGG CGATGTGGAC TCCTCGCATG CCGCCCACCA CGCGGCCGCT 
GCCCACCAGA TGTACTACAA CTCCCATCAC ATGTTCCACT CGGCGGCGGC GGCCTCTGCC 
GGGGAGTGGC ACTCACCCGC CTCGAGCACG GCGGATAACT TCGTTCAGAA TGTGCCCACG 
TCGGCCCACC AGCTGATGCA GCAGCACCAC CATCATCACG CCCATGCCTC CAGCAGTTCC 
GCCAGTTCCG GGAGCAGCAG TAGCGGTGGT GCACCGGGTG CGCCCCAGCT CAACGAGACC 
AACAGCAGCA TCGGCGTCGG AGGAGCAGGC GGTGGCGGTG GTGTTGGCGG GGCCACCGAT 
GGAGGACCAG GTTCCGCACC ACCCAACCAT CAGCAGCACA TCGCCGAAGG TCTGCCGTCG 
CCACCGATTA CCGTTTCGGG CTCGGAAATC TCTAGCCCGG GGGCGCCGAC TTCTGCCTCG 
TCGCCGCATC ATCACTTGGC ACACCATTTG AGTGCCGTCG CCAACAACAA CAACAACAAC 
AACAACAACA ACAATAGCCC ATCCACCCAT AACAACAACA ACAATAACAA TTCGGTGAGC 
AACAACAACA GGACATCGCC ATCGAAGCCG CCATACTTCG ACTGGATGAA GAAGCCCGCC 
TATCCAGCAC AACCACAACC AGACCTGAGC AGCTCGCCCA ACTTAGAGGA TCTGAGTGAT 
TTGCTGGACG CAAGCGGCAA AACCCGCACC AAGGATAAGT ACCGCGTGGT GTACACCGAC 
TTCCAGCGCC TGGAGCTGGA GAAGGAGTAC TGCACCTCCC GCTACATCAC CATCCGGCGG 
AAGAGCGAGC TCGCCCAGAC GCTGTCGCTG TCGGAGCGCC AGGTTAAGAT CTGGTTCCAG 
AACCGCCGCG CCAAGGAGCG CAAGCAGAAC AAGAAGGGTA GCGATCCGAA CGTGATGGGC 
GTGGGAGTGC AGCATGCGGA CTACAGCCAG CTGCTGGACG CCAAAGCGAA GCTGGAGCCG 
GGCCTGCACC TGTCCCACTC GCTGGCCCAC TCGATGAACC CCATGGCGGC GATGAACATT 
CCCGCCATGC GCCTGCATCC CCACCTGGCC GCCCACAGCC ACTCCTTGGC GGCGGTGGCG 
GCGCACTCAC ACCAGCTGCA GCAGCAGCAC AGTGCGCAGA TGTCCGCTGC GGCGGCAGTG 
GGCACGCTCT CGATGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001260641.1
CDS	378..1715
Translation	MVSHYYNTLPYTQKHSAANLAYASAAGQPWNWTPNYHHTPPNHQFLGDVDSSHAAHHAAAAHQMYYNSHHMFHSAAAASAGEWHSPASSTADNFVQNVPTSAHQLMQQHHHHHAHASSSSASSGSSSSGGAPGAPQLNETNSSIGVGGAGGGGGVGGATDGGPGSAPPNHQQHIAEGLPSPPITVSGSEISSPGAPTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPNVMGVGVQHADYSQLLDAKAKLEPGLHLSHSLAHSMNPMAAMNIPAMRLHPHLAAHSHSLAAVAAHSHQLQQQHSAQMSAAAAVGTLSM

Target ORF information:

RefSeq Version	NM_001273712.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster caudal (cad), transcript variant C, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001273712.1

ORF Insert Sequence:

ATGGTTTCGC ACTACTACAA CACACTGCCC TACACACAAA AGCACAGTGC CGCCAATTTG 
GCCTATGCCT CAGCGGCGGG CCAGCCATGG AACTGGACGC CCAACTACCA CCACACGCCG 
CCGAACCACC AGTTCCTGGG CGATGTGGAC TCCTCGCATG CCGCCCACCA CGCGGCCGCT 
GCCCACCAGA TGTACTACAA CTCCCATCAC ATGTTCCACT CGGCGGCGGC GGCCTCTGCC 
GGGGAGTGGC ACTCACCCGC CTCGAGCACG GCGGATAACT TCGTTCAGAA TGTGCCCACG 
TCGGCCCACC AGCTGATGCA GCAGCACCAC CATCATCACG CCCATGCCTC CAGCAGTTCC 
GCCAGTTCCG GGAGCAGCAG TAGCGGTGGT GCACCGGGTG CGCCCCAGCT CAACGAGACC 
AACAGCAGCA TCGGCGTCGG AGGAGCAGGC GGTGGCGGTG GTGTTGGCGG GGCCACCGAT 
GGAGGACCAG GTTCCGCACC ACCCAACCAT CAGCAGCACA TCGCCGAAGG TCTGCCGTCG 
CCACCGATTA CCGTTTCGGG CTCGGAAATC TCTAGCCCGG GGGCGCCGAC TTCTGCCTCG 
TCGCCGCATC ATCACTTGGC ACACCATTTG AGTGCCGTCG CCAACAACAA CAACAACAAC 
AACAACAACA ACAATAGCCC ATCCACCCAT AACAACAACA ACAATAACAA TTCGGTGAGC 
AACAACAACA GGACATCGCC ATCGAAGCCG CCATACTTCG ACTGGATGAA GAAGCCCGCC 
TATCCAGCAC AACCACAACC AGACCTGAGC AGCTCGCCCA ACTTAGAGGA TCTGAGTGAT 
TTGCTGGACG CAAGCGGCAA AACCCGCACC AAGGATAAGT ACCGCGTGGT GTACACCGAC 
TTCCAGCGCC TGGAGCTGGA GAAGGAGTAC TGCACCTCCC GCTACATCAC CATCCGGCGG 
AAGAGCGAGC TCGCCCAGAC GCTGTCGCTG TCGGAGCGCC AGGTTAAGAT CTGGTTCCAG 
AACCGCCGCG CCAAGGAGCG CAAGCAGAAC AAGAAGGGTA GCGATCCGAA CGTGATGGGC 
GTGGGAGTGC AGCATGCGGA CTACAGCCAG CTGCTGGACG CCAAAGCGAA GCTGGAGCCG 
GGCCTGCACC TGTCCCACTC GCTGGCCCAC TCGATGAACC CCATGGCGGC GATGAACATT 
CCCGCCATGC GCCTGCATCC CCACCTGGCC GCCCACAGCC ACTCCTTGGC GGCGGTGGCG 
GCGCACTCAC ACCAGCTGCA GCAGCAGCAC AGTGCGCAGA TGTCCGCTGC GGCGGCAGTG 
GGCACGCTCT CGATGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
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Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
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The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
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cad cDNA ORF clone, Drosophila melanogaster(fruit fly)

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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