CG5885 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG5885
Entrez Gene ID	34314
Full Name	CG5885 gene product from transcript CG5885-RB
Synonyms	AI945207,BEST:CK01296,CK01296,Dmel\CG5885
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 30E4-30E4

mRNA and Protein(s)

mRNA	Protein	Name
NM_001316388.1	NP_001303317.1	uncharacterized protein, isoform B
NM_135477.3	NP_609321.1	uncharacterized protein, isoform A

Pathways from BioSystems

Homologies

	SSR3	XP_002803001.1
Bos taurus (cattle)	SSR3	NP_001070512.1
Caenorhabditis elegans (roundworm)	trap-3	NP_500198.1
Homo sapiens (human)	SSR3	NP_009038.1
Danio rerio (zebrafish)	LOC100535344	XP_003200516.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP008761	XP_314880.2
Xenopus tropicalis (tropical clawed frog)	ssr3	NP_001005080.1
Gallus gallus (chicken)	SSR3	NP_001264404.1
Drosophila melanogaster (fruit fly)	CG5885	NP_609321.1
Pan troglodytes (chimpanzee)	SSR3	XP_003950269.1
Mus musculus (house mouse)	Ssr3	NP_080431.1
Rattus norvegicus (Norway rat)	Ssr3	NP_112382.2
Danio rerio (zebrafish)	ssr3	NP_956347.1
Canis lupus familiaris (dog)	SSR3	XP_534317.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG5885 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG5885 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa14245	NM_135477.3 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant A (CG5885), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
OFa14245	NM_001316388.1 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant B (CG5885), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG5885 ( NM_001316388.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001303317.1 Drosophila melanogaster uncharacterized protein, transcript variant B (CG5885), mRNA.

Price & Availability↑

CloneID	OFa14245
Clone ID Related Accession (Same CDS sequence)	NM_001316388.1 , NM_135477.3
Accession Version	NM_001316388.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 573bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGGATCCG GCAAACAACA GAAAGTCCAG TCCTCTGGCT TCACCAAGGA AGAGGAGCTG 
CTGCTGCAGG ACTTTAGCCG CAACGTGAGC ACCAAGTCGT CGGCGCTGTT CTACGGCAAT 
GCCTTTATCG TGTCGGCCGT TCCAATCTGG CTCTTCTGGC GCATCCACAA CATGGACTTG 
TGGCCCAGCT CCATCCTGTT CGTCCTGGTG ACGGCCGCTA GTACTTATCT GATGGCCACC 
GCCTACAAGA ACATCAAGTT CCAGCTGAAG CACAAGATCG CCGGACGGCG GGAGGAGGCG 
GTGACCCGCG AGGTCAACCG TCAGGTGGGC GATGACAAGA AGGTCACGCG CAAGGAAAAG 
GACGAGCGCA TCCTGTGGAA GAAGAACGAG GTAGCCGACT ACGAGGCCAC CACCTTCTCC 
ATCTTCTACA ACAACGCCAT CTACCTGGCC GTTATCATTT TCATCAGCTT CTTTATCCTG 
AAGAACTCGA CGCCGTTCAT CAACTACATC TTTTCCGTGG GCATCGCCAG CGGCGCTCTG 
TCGCTCTTCT CCACCAGCGC ACAGACGAAC TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001303317.1
CDS	250..822
Translation	MGSGKQQKVQSSGFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAVPIWLFWRIHNMDLWPSSILFVLVTAASTYLMATAYKNIKFQLKHKIAGRREEAVTREVNRQVGDDKKVTRKEKDERILWKKNEVADYEATTFSIFYNNAIYLAVIIFISFFILKNSTPFINYIFSVGIASGALSLFSTSAQTN

Target ORF information:

RefSeq Version	NM_001316388.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant B (CG5885), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001316388.1

ORF Insert Sequence:

ATGGGATCCG GCAAACAACA GAAAGTCCAG TCCTCTGGCT TCACCAAGGA AGAGGAGCTG 
CTGCTGCAGG ACTTTAGCCG CAACGTGAGC ACCAAGTCGT CGGCGCTGTT CTACGGCAAT 
GCCTTTATCG TGTCGGCCGT TCCAATCTGG CTCTTCTGGC GCATCCACAA CATGGACTTG 
TGGCCCAGCT CCATCCTGTT CGTCCTGGTG ACGGCCGCTA GTACTTATCT GATGGCCACC 
GCCTACAAGA ACATCAAGTT CCAGCTGAAG CACAAGATCG CCGGACGGCG GGAGGAGGCG 
GTGACCCGCG AGGTCAACCG TCAGGTGGGC GATGACAAGA AGGTCACGCG CAAGGAAAAG 
GACGAGCGCA TCCTGTGGAA GAAGAACGAG GTAGCCGACT ACGAGGCCAC CACCTTCTCC 
ATCTTCTACA ACAACGCCAT CTACCTGGCC GTTATCATTT TCATCAGCTT CTTTATCCTG 
AAGAACTCGA CGCCGTTCAT CAACTACATC TTTTCCGTGG GCATCGCCAG CGGCGCTCTG 
TCGCTCTTCT CCACCAGCGC ACAGACGAAC TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG5885 ( NM_135477.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_609321.1 Drosophila melanogaster uncharacterized protein, transcript variant A (CG5885), mRNA.

Price & Availability↑

CloneID	OFa14245
Clone ID Related Accession (Same CDS sequence)	NM_001316388.1 , NM_135477.3
Accession Version	NM_135477.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 573bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jan 16, 2013 this sequence version replaced NM_135477.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGGATCCG GCAAACAACA GAAAGTCCAG TCCTCTGGCT TCACCAAGGA AGAGGAGCTG 
CTGCTGCAGG ACTTTAGCCG CAACGTGAGC ACCAAGTCGT CGGCGCTGTT CTACGGCAAT 
GCCTTTATCG TGTCGGCCGT TCCAATCTGG CTCTTCTGGC GCATCCACAA CATGGACTTG 
TGGCCCAGCT CCATCCTGTT CGTCCTGGTG ACGGCCGCTA GTACTTATCT GATGGCCACC 
GCCTACAAGA ACATCAAGTT CCAGCTGAAG CACAAGATCG CCGGACGGCG GGAGGAGGCG 
GTGACCCGCG AGGTCAACCG TCAGGTGGGC GATGACAAGA AGGTCACGCG CAAGGAAAAG 
GACGAGCGCA TCCTGTGGAA GAAGAACGAG GTAGCCGACT ACGAGGCCAC CACCTTCTCC 
ATCTTCTACA ACAACGCCAT CTACCTGGCC GTTATCATTT TCATCAGCTT CTTTATCCTG 
AAGAACTCGA CGCCGTTCAT CAACTACATC TTTTCCGTGG GCATCGCCAG CGGCGCTCTG 
TCGCTCTTCT CCACCAGCGC ACAGACGAAC TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_609321.1
CDS	96..668
Translation	MGSGKQQKVQSSGFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAVPIWLFWRIHNMDLWPSSILFVLVTAASTYLMATAYKNIKFQLKHKIAGRREEAVTREVNRQVGDDKKVTRKEKDERILWKKNEVADYEATTFSIFYNNAIYLAVIIFISFFILKNSTPFINYIFSVGIASGALSLFSTSAQTN

Target ORF information:

RefSeq Version	NM_135477.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant A (CG5885), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_135477.3

ORF Insert Sequence:

ATGGGATCCG GCAAACAACA GAAAGTCCAG TCCTCTGGCT TCACCAAGGA AGAGGAGCTG 
CTGCTGCAGG ACTTTAGCCG CAACGTGAGC ACCAAGTCGT CGGCGCTGTT CTACGGCAAT 
GCCTTTATCG TGTCGGCCGT TCCAATCTGG CTCTTCTGGC GCATCCACAA CATGGACTTG 
TGGCCCAGCT CCATCCTGTT CGTCCTGGTG ACGGCCGCTA GTACTTATCT GATGGCCACC 
GCCTACAAGA ACATCAAGTT CCAGCTGAAG CACAAGATCG CCGGACGGCG GGAGGAGGCG 
GTGACCCGCG AGGTCAACCG TCAGGTGGGC GATGACAAGA AGGTCACGCG CAAGGAAAAG 
GACGAGCGCA TCCTGTGGAA GAAGAACGAG GTAGCCGACT ACGAGGCCAC CACCTTCTCC 
ATCTTCTACA ACAACGCCAT CTACCTGGCC GTTATCATTT TCATCAGCTT CTTTATCCTG 
AAGAACTCGA CGCCGTTCAT CAACTACATC TTTTCCGTGG GCATCGCCAG CGGCGCTCTG 
TCGCTCTTCT CCACCAGCGC ACAGACGAAC TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG5885 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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