CG3407 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG3407
Entrez Gene ID	33606
Full Name	CG3407 gene product from transcript CG3407-RA
Synonyms	Dmel\CG3407,cg3407
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 24C5-24C5

mRNA and Protein(s)

mRNA	Protein	Name
NM_134965.3	NP_608809.1	uncharacterized protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG3407 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG3407 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa13685	NM_134965.3 Latest version!	Drosophila melanogaster uncharacterized protein (CG3407), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG3407 ( NM_134965.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_608809.1 Drosophila melanogaster uncharacterized protein (CG3407), mRNA.

Price & Availability↑

CloneID	OFa13685
Clone ID Related Accession (Same CDS sequence)	NM_134965.3
Accession Version	NM_134965.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2145bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jan 16, 2013 this sequence version replaced NM_134965.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGAGCGCA AGGAAGTGGA CACCCAGCAG TTCATCGACC ATACGCTGCT GGCGAACCAC 
TTCATCATGG ATCTGATAGA TCAGACCTAC AAATCCGAAG GACCCACGAA TCTGAGCACG 
AATCCCAGTT CCGGCAACTC CGAGAGCGGA GTGGGTTACG TGGAAAAGGA ATCGCTGACG 
CCGGAGCTGA ATTTCCACAA CACCATCTTT CAGTTTGTGA ACAAATCATC GCCAGAAAAT 
GATGTTGTAC CCCACCAGGT GGATGCGCAG CCCACATTTC CGGCCCTGGC CATTGAGCCC 
ACAGTGCCCA TCGACGTGTC CACAGGTCTA CACGAGGACG AGGATCTCCT CTATGCGCAC 
AACAACGCCT CCTGCACGAA CGCCCGCAAG GTGCTGCCCC ACAAGAAACG CATTTCGCGG 
AAGCTCAAAG GCAACATAGA CCCCGAACTG GACCACCAGC ACAAGCATGT CCAGGATGTG 
GCACCCTCTT CCCTGTATAG CTGTGAAATA TGCGGCTATG CTGTGCACAC CCAATTGGAC 
TTCTTTGCCC ATCTGAAGCA GCACTACGAG CCCACCGTTC TGGAGCAGCG CCTGGTCGTC 
CAGGATCCCC AGCAACAGCA CCAGCAAAAG GAACCCCTCG ACATGTGTGG TTTGTCTGCG 
CAGGATAAGC TGCAACAGGA GCAGGCCAAA TTGGATCAGG TTTTTCAGGA CGTGCAGCTT 
AATTTTGAGA ACTTTCACAA CATCAGTCAC CATGTGAACG ATGTTGCCAA CGTCGGAGTG 
AATATGGTGC TGCATGGACA AGCCACGGAC AAATTAAATG CCGTGGTGGT TAACACCAGC 
AGCACTCCGA ATTCTGTACC CGTGGTGGAT GACGTCGAGT TCAGCGATAC GGAAGACATG 
CTCGAGGGTA TCCGCAATGT GGTGGACAAG GTTTCAATAG AAGACACCTG CGATGAACTG 
GTGGATCTTG AATTGACCTC CAGCGGAATG ACGGCACCCT GGTTTAATAA CAACTTCAGG 
GATATCACAT TTCCGGCTCT TCTGCTGCCA GGAGAGCCGC CACCAGCTTC TTCAGAGCCA 
GCTACTCCAC TGCTTAAAGA GAATCCCCAT GTAGGCGACC ACATGGCACT CGATTTTCTT 
AGTCCCGAGA AGGCGGACCC TCAAGAGGAA GCAAAACTGG AGAAAACACT GTCTAAAGCC 
TGCGAGCCCA ATGAGCAAAC CTTGTTAGTT GCACCACCTG CCTGCCAAAC ACCACCGATT 
CCAACTGTTC CACCAGCCAA CTCATCCATT GAGCAGCTGC GCAGATCTCC CCTAGAACTA 
AGTGAAGCCT TCAAGTTGGA AGAGGATGAC ATGACCGATA GCCGACCAGC TTCGTCGTTC 
GAGGAAGGCG ATCCCGATGC TGAAGAGCCA AATGAATGTT TTCAGATGGA GGTTTTGGAT 
ACGAGTTTAA CCGAGGAGGC AGAGAACAAG ACAAGGAGGA AACATTTCTG CGACAAGTGC 
AATCGCGATT TCAACTCGTA CAATGCCCTC AAGTACCATC AGTATACGCA CAATCAGGAG 
AGATCTCACA AATGCGACAG CTGCGAGAGA TCCTTCTACA CGCAGAGTGC GCTAAAGGCT 
CACGAAAGGA CACATTCCGG CGTGAAACCC TTTAAATGCG ACAAGTGCGA GTTTCAGTTT 
CGGCAGTGGG GTGACCTGAA GTACCACATC ATCTCGCGGC ACAGCGACGT CAAGGCGCAC 
ATGTGCGAAT TTTGCGGAAA GAGTTTTTCC CGGCGCTACT CCCTGGTTGT CCACAGAAGA 
ATCCACACCA GGGAGAAGAA CTACGCCTGC CAGTATTGTG ACAAGACCTT CCGGGCCAGC 
TCCTACCTGC TCAGTCATAT TAAAGTGCAC ACGGGCGAGC GGCCGTACGA GTGTTCCATC 
TGTGAAAAGA AATTTCGAGT CTCAGGCGAT CTCAAGCGAC ATTCAAGGAT TCACGATCCC 
AGCAGAACAA GCCAACCGCC TGCGGAAAAA GCTAAAAAGA AGAGGGCAGC CGCGAGCAAT 
AAGCAATTGC CAATCGAAGA GGATGACGAG TTGGCCACCA ATATCCAAAA CAATAAGTCT 
GACGCCATGC GCGACCAAAC TGGACAGAAA ATCCTGGGCT TATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_608809.1
CDS	81..2225
Translation	MERKEVDTQQFIDHTLLANHFIMDLIDQTYKSEGPTNLSTNPSSGNSESGVGYVEKESLTPELNFHNTIFQFVNKSSPENDVVPHQVDAQPTFPALAIEPTVPIDVSTGLHEDEDLLYAHNNASCTNARKVLPHKKRISRKLKGNIDPELDHQHKHVQDVAPSSLYSCEICGYAVHTQLDFFAHLKQHYEPTVLEQRLVVQDPQQQHQQKEPLDMCGLSAQDKLQQEQAKLDQVFQDVQLNFENFHNISHHVNDVANVGVNMVLHGQATDKLNAVVVNTSSTPNSVPVVDDVEFSDTEDMLEGIRNVVDKVSIEDTCDELVDLELTSSGMTAPWFNNNFRDITFPALLLPGEPPPASSEPATPLLKENPHVGDHMALDFLSPEKADPQEEAKLEKTLSKACEPNEQTLLVAPPACQTPPIPTVPPANSSIEQLRRSPLELSEAFKLEEDDMTDSRPASSFEEGDPDAEEPNECFQMEVLDTSLTEEAENKTRRKHFCDKCNRDFNSYNALKYHQYTHNQERSHKCDSCERSFYTQSALKAHERTHSGVKPFKCDKCEFQFRQWGDLKYHIISRHSDVKAHMCEFCGKSFSRRYSLVVHRRIHTREKNYACQYCDKTFRASSYLLSHIKVHTGERPYECSICEKKFRVSGDLKRHSRIHDPSRTSQPPAEKAKKKRAAASNKQLPIEEDDELATNIQNNKSDAMRDQTGQKILGL

Target ORF information:

RefSeq Version	NM_134965.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG3407), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_134965.3

ORF Insert Sequence:

ATGGAGCGCA AGGAAGTGGA CACCCAGCAG TTCATCGACC ATACGCTGCT GGCGAACCAC 
TTCATCATGG ATCTGATAGA TCAGACCTAC AAATCCGAAG GACCCACGAA TCTGAGCACG 
AATCCCAGTT CCGGCAACTC CGAGAGCGGA GTGGGTTACG TGGAAAAGGA ATCGCTGACG 
CCGGAGCTGA ATTTCCACAA CACCATCTTT CAGTTTGTGA ACAAATCATC GCCAGAAAAT 
GATGTTGTAC CCCACCAGGT GGATGCGCAG CCCACATTTC CGGCCCTGGC CATTGAGCCC 
ACAGTGCCCA TCGACGTGTC CACAGGTCTA CACGAGGACG AGGATCTCCT CTATGCGCAC 
AACAACGCCT CCTGCACGAA CGCCCGCAAG GTGCTGCCCC ACAAGAAACG CATTTCGCGG 
AAGCTCAAAG GCAACATAGA CCCCGAACTG GACCACCAGC ACAAGCATGT CCAGGATGTG 
GCACCCTCTT CCCTGTATAG CTGTGAAATA TGCGGCTATG CTGTGCACAC CCAATTGGAC 
TTCTTTGCCC ATCTGAAGCA GCACTACGAG CCCACCGTTC TGGAGCAGCG CCTGGTCGTC 
CAGGATCCCC AGCAACAGCA CCAGCAAAAG GAACCCCTCG ACATGTGTGG TTTGTCTGCG 
CAGGATAAGC TGCAACAGGA GCAGGCCAAA TTGGATCAGG TTTTTCAGGA CGTGCAGCTT 
AATTTTGAGA ACTTTCACAA CATCAGTCAC CATGTGAACG ATGTTGCCAA CGTCGGAGTG 
AATATGGTGC TGCATGGACA AGCCACGGAC AAATTAAATG CCGTGGTGGT TAACACCAGC 
AGCACTCCGA ATTCTGTACC CGTGGTGGAT GACGTCGAGT TCAGCGATAC GGAAGACATG 
CTCGAGGGTA TCCGCAATGT GGTGGACAAG GTTTCAATAG AAGACACCTG CGATGAACTG 
GTGGATCTTG AATTGACCTC CAGCGGAATG ACGGCACCCT GGTTTAATAA CAACTTCAGG 
GATATCACAT TTCCGGCTCT TCTGCTGCCA GGAGAGCCGC CACCAGCTTC TTCAGAGCCA 
GCTACTCCAC TGCTTAAAGA GAATCCCCAT GTAGGCGACC ACATGGCACT CGATTTTCTT 
AGTCCCGAGA AGGCGGACCC TCAAGAGGAA GCAAAACTGG AGAAAACACT GTCTAAAGCC 
TGCGAGCCCA ATGAGCAAAC CTTGTTAGTT GCACCACCTG CCTGCCAAAC ACCACCGATT 
CCAACTGTTC CACCAGCCAA CTCATCCATT GAGCAGCTGC GCAGATCTCC CCTAGAACTA 
AGTGAAGCCT TCAAGTTGGA AGAGGATGAC ATGACCGATA GCCGACCAGC TTCGTCGTTC 
GAGGAAGGCG ATCCCGATGC TGAAGAGCCA AATGAATGTT TTCAGATGGA GGTTTTGGAT 
ACGAGTTTAA CCGAGGAGGC AGAGAACAAG ACAAGGAGGA AACATTTCTG CGACAAGTGC 
AATCGCGATT TCAACTCGTA CAATGCCCTC AAGTACCATC AGTATACGCA CAATCAGGAG 
AGATCTCACA AATGCGACAG CTGCGAGAGA TCCTTCTACA CGCAGAGTGC GCTAAAGGCT 
CACGAAAGGA CACATTCCGG CGTGAAACCC TTTAAATGCG ACAAGTGCGA GTTTCAGTTT 
CGGCAGTGGG GTGACCTGAA GTACCACATC ATCTCGCGGC ACAGCGACGT CAAGGCGCAC 
ATGTGCGAAT TTTGCGGAAA GAGTTTTTCC CGGCGCTACT CCCTGGTTGT CCACAGAAGA 
ATCCACACCA GGGAGAAGAA CTACGCCTGC CAGTATTGTG ACAAGACCTT CCGGGCCAGC 
TCCTACCTGC TCAGTCATAT TAAAGTGCAC ACGGGCGAGC GGCCGTACGA GTGTTCCATC 
TGTGAAAAGA AATTTCGAGT CTCAGGCGAT CTCAAGCGAC ATTCAAGGAT TCACGATCCC 
AGCAGAACAA GCCAACCGCC TGCGGAAAAA GCTAAAAAGA AGAGGGCAGC CGCGAGCAAT 
AAGCAATTGC CAATCGAAGA GGATGACGAG TTGGCCACCA ATATCCAAAA CAATAAGTCT 
GACGCCATGC GCGACCAAAC TGGACAGAAA ATCCTGGGCT TATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG3407 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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