CG40006 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG40006
Entrez Gene ID	3355123
Full Name	CG40006 gene product from transcript CG40006-RA
Synonyms	BcDNA:RE68569,Dmel\CG40006
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001042936.1	NP_001036401.1	uncharacterized protein

Pathways from BioSystems

Homologies

Anopheles gambiae (African malaria mosquito)	SCRB5	XP_312183.4
Drosophila melanogaster (fruit fly)	CG40006	NP_001036401.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG40006 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG40006 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa15557	NM_001042936.1 Latest version!	Drosophila melanogaster uncharacterized protein (CG40006), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG40006 ( NM_001042936.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001036401.1 Drosophila melanogaster uncharacterized protein (CG40006), mRNA.

Price & Availability↑

CloneID	OFa15557
Clone ID Related Accession (Same CDS sequence)	NM_001042936.1
Accession Version	NM_001042936.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2070bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAAGGAGT TTAGCAAAAT GTTTGCGCGA CGATATAGTT CAGTATCAAG AGACGTAGAG 
GCCAGCAATC AGCGGCAGTC AGCAGTGACC CCTGGATCTG GGTTGAGCAC AGACGCAGAT 
CCTGCGGTGT CTTGTGCCGC TCAGGTAGCA CTGCAACGAA TCCAGCGCCG CAAAAGTCTC 
AAGGCAAATC GTTCAATGAA TCCGATAGAC ATACTAAGCA GCTTTTTCAA CGAGCCAATC 
CAAGGCAAAC GGAATCGAGT TCCTACCCGT TTATTTATAC TTCTAGTCAT CGGATTTTTG 
GCTATTATAA CATCTACACT GATTAAAGTT TTGGAACCAT ACGATTTGAT ATTTAAATGG 
AAATTAATCA TGACAGAGGG AGGTGAGATC TTTAATCTGT GGGCCCAGCC TCCAGTCGAT 
CTGTATATTA AGATATATTT GTTCAACATA ACCAATGCCA ACGCGTTTTT AGCGGGTCGC 
GAGCAGCTTA GAGTCGAACA AGTTGGTCCC TATGTTTATA AGGAGATAAT GACACATGAG 
AATGTAACGT TCAATTCGAA TAACACCATG TCCAGCACTC CCAGTCATCC CTTAGTCTGG 
CAGGAGGAAA TGTCTGGGAA TTGTCGTGAG GACGATGAGG TTGTAATGCT CAATATTGCC 
ATGCTGGCAA TATCACACCT TACTGCCAAC CAGCCGTTCT TAGTTAGAAT GGCTCTGAAG 
ACACTACTAC TGAGTACAAA GTCGGAGCCA ATAGTTCGCA CCACTGCCAA GGAATTCATG 
TTTGGCTATC CCTCCGCCCT GGCCACTCTC GGCAACACCT TCCTTCCAAA TTGGATTTCC 
TTTGAAAAGG TTGGGCTTAT CGATCGCATG TACGACTTCT CAACGGATTT CGAGACGTTC 
TACACAGGCG TGCCCAATCC AGCGCTTTCG GGATTATATG CATCGTATCG CGGAGAGACA 
ACGCTGCCAC AGTGGGACGG GGACCATTGC AGCAACATAG AGTTTGCATC TGATGGTACA 
AAGTTCAAAA GCTTCATTCA GCCTAACGAG ACCGTTAAGT TCTTCCGAAA AAGCATGTGT 
AGACCGATAA ACTTGTACCG GGTGGGAAAC GAAAAAACCT ATGGCAGCCT TAAAGGATAT 
AATTATGTAT TTGAGGATAA CGCCTTTGAT AATGGCGCAA CTAATGAAGC TAACAAATGT 
TTTTGTAGAA AAGGTGACTG TCAGCCGGTT GGACTTATTG ATGTTACTGA CTGCTATTAC 
GGATTCCCAA TCTCCTTAAG TTTTCCCCAC TTCATGAACG GTGACGTGGG GCTCCAACAA 
AACGTCACCG GCATAAGTCC AGATCCGGAT AAACACTCAT CAACCTTTGT CATTCAACCG 
GAATCCGGCC TGCCGTTGTC ACTCTCTGTA AAAGTGCAAA TTAACATGCA CTTTAAGGAC 
CTGAGCAATT TTCCAGTAGT ATCTGTATTT AATCATCTAA CAGTGCCAAT GTTGTGGTTT 
GAAATCATGA TGTCAAAGCT GCCCGACAGC TTGGACTCGC GGTTCAACTT TTACCTGAAC 
ATTTTGCCGT TAGTTAATCC CTTAGGCTTT TGGAGTGGCA TACTATTGGG AATAAGTCTT 
TTGGGGTATG CAATAACCAA GGCCACGCTT CACATGTCTA CCTTTTCTCG ACGAGCTGCT 
AATATAACAG ATGTTAAATA TGTACGAGCA AATTTAATTC AAAACATCGC AGGTGAAGCA 
GCGAATCATG CTTACAGTCC GTGCGATATT AAGTTACTAG ATGATATTTC GGTTGTAAGG 
CATCCTGTTA ATAAGCAAAC AGTCCAGGAT TCTGGATTCA GTTCAAAAAC AACATACGCC 
TTGGATATGG AACCTGCTTT ATTAGACACG AGCGAGAGCA GCGACGAGGG GCGAGATTGT 
GATATTGTTA CCATATCCCG TAATTCTACA AGCACCCGCT TTTGCGCAGA TGAAAAAAAA 
TGCTGGCTCG GCGACGATAT ACGAGTCGAG TGTTTCACCG AGAGTCGAGC TCCTCAAACG 
ATTTTGAAAA GGGAAGAACA AATACATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001036401.1
CDS	226..2295
Translation	MKEFSKMFARRYSSVSRDVEASNQRQSAVTPGSGLSTDADPAVSCAAQVALQRIQRRKSLKANRSMNPIDILSSFFNEPIQGKRNRVPTRLFILLVIGFLAIITSTLIKVLEPYDLIFKWKLIMTEGGEIFNLWAQPPVDLYIKIYLFNITNANAFLAGREQLRVEQVGPYVYKEIMTHENVTFNSNNTMSSTPSHPLVWQEEMSGNCREDDEVVMLNIAMLAISHLTANQPFLVRMALKTLLLSTKSEPIVRTTAKEFMFGYPSALATLGNTFLPNWISFEKVGLIDRMYDFSTDFETFYTGVPNPALSGLYASYRGETTLPQWDGDHCSNIEFASDGTKFKSFIQPNETVKFFRKSMCRPINLYRVGNEKTYGSLKGYNYVFEDNAFDNGATNEANKCFCRKGDCQPVGLIDVTDCYYGFPISLSFPHFMNGDVGLQQNVTGISPDPDKHSSTFVIQPESGLPLSLSVKVQINMHFKDLSNFPVVSVFNHLTVPMLWFEIMMSKLPDSLDSRFNFYLNILPLVNPLGFWSGILLGISLLGYAITKATLHMSTFSRRAANITDVKYVRANLIQNIAGEAANHAYSPCDIKLLDDISVVRHPVNKQTVQDSGFSSKTTYALDMEPALLDTSESSDEGRDCDIVTISRNSTSTRFCADEKKCWLGDDIRVECFTESRAPQTILKREEQIH

Target ORF information:

RefSeq Version	NM_001042936.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG40006), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001042936.1

ORF Insert Sequence:

ATGAAGGAGT TTAGCAAAAT GTTTGCGCGA CGATATAGTT CAGTATCAAG AGACGTAGAG 
GCCAGCAATC AGCGGCAGTC AGCAGTGACC CCTGGATCTG GGTTGAGCAC AGACGCAGAT 
CCTGCGGTGT CTTGTGCCGC TCAGGTAGCA CTGCAACGAA TCCAGCGCCG CAAAAGTCTC 
AAGGCAAATC GTTCAATGAA TCCGATAGAC ATACTAAGCA GCTTTTTCAA CGAGCCAATC 
CAAGGCAAAC GGAATCGAGT TCCTACCCGT TTATTTATAC TTCTAGTCAT CGGATTTTTG 
GCTATTATAA CATCTACACT GATTAAAGTT TTGGAACCAT ACGATTTGAT ATTTAAATGG 
AAATTAATCA TGACAGAGGG AGGTGAGATC TTTAATCTGT GGGCCCAGCC TCCAGTCGAT 
CTGTATATTA AGATATATTT GTTCAACATA ACCAATGCCA ACGCGTTTTT AGCGGGTCGC 
GAGCAGCTTA GAGTCGAACA AGTTGGTCCC TATGTTTATA AGGAGATAAT GACACATGAG 
AATGTAACGT TCAATTCGAA TAACACCATG TCCAGCACTC CCAGTCATCC CTTAGTCTGG 
CAGGAGGAAA TGTCTGGGAA TTGTCGTGAG GACGATGAGG TTGTAATGCT CAATATTGCC 
ATGCTGGCAA TATCACACCT TACTGCCAAC CAGCCGTTCT TAGTTAGAAT GGCTCTGAAG 
ACACTACTAC TGAGTACAAA GTCGGAGCCA ATAGTTCGCA CCACTGCCAA GGAATTCATG 
TTTGGCTATC CCTCCGCCCT GGCCACTCTC GGCAACACCT TCCTTCCAAA TTGGATTTCC 
TTTGAAAAGG TTGGGCTTAT CGATCGCATG TACGACTTCT CAACGGATTT CGAGACGTTC 
TACACAGGCG TGCCCAATCC AGCGCTTTCG GGATTATATG CATCGTATCG CGGAGAGACA 
ACGCTGCCAC AGTGGGACGG GGACCATTGC AGCAACATAG AGTTTGCATC TGATGGTACA 
AAGTTCAAAA GCTTCATTCA GCCTAACGAG ACCGTTAAGT TCTTCCGAAA AAGCATGTGT 
AGACCGATAA ACTTGTACCG GGTGGGAAAC GAAAAAACCT ATGGCAGCCT TAAAGGATAT 
AATTATGTAT TTGAGGATAA CGCCTTTGAT AATGGCGCAA CTAATGAAGC TAACAAATGT 
TTTTGTAGAA AAGGTGACTG TCAGCCGGTT GGACTTATTG ATGTTACTGA CTGCTATTAC 
GGATTCCCAA TCTCCTTAAG TTTTCCCCAC TTCATGAACG GTGACGTGGG GCTCCAACAA 
AACGTCACCG GCATAAGTCC AGATCCGGAT AAACACTCAT CAACCTTTGT CATTCAACCG 
GAATCCGGCC TGCCGTTGTC ACTCTCTGTA AAAGTGCAAA TTAACATGCA CTTTAAGGAC 
CTGAGCAATT TTCCAGTAGT ATCTGTATTT AATCATCTAA CAGTGCCAAT GTTGTGGTTT 
GAAATCATGA TGTCAAAGCT GCCCGACAGC TTGGACTCGC GGTTCAACTT TTACCTGAAC 
ATTTTGCCGT TAGTTAATCC CTTAGGCTTT TGGAGTGGCA TACTATTGGG AATAAGTCTT 
TTGGGGTATG CAATAACCAA GGCCACGCTT CACATGTCTA CCTTTTCTCG ACGAGCTGCT 
AATATAACAG ATGTTAAATA TGTACGAGCA AATTTAATTC AAAACATCGC AGGTGAAGCA 
GCGAATCATG CTTACAGTCC GTGCGATATT AAGTTACTAG ATGATATTTC GGTTGTAAGG 
CATCCTGTTA ATAAGCAAAC AGTCCAGGAT TCTGGATTCA GTTCAAAAAC AACATACGCC 
TTGGATATGG AACCTGCTTT ATTAGACACG AGCGAGAGCA GCGACGAGGG GCGAGATTGT 
GATATTGTTA CCATATCCCG TAATTCTACA AGCACCCGCT TTTGCGCAGA TGAAAAAAAA 
TGCTGGCTCG GCGACGATAT ACGAGTCGAG TGTTTCACCG AGAGTCGAGC TCCTCAAACG 
ATTTTGAAAA GGGAAGAACA AATACATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG40006 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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