CG42818 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG42818
Entrez Gene ID	10178877
Full Name	CG42818 gene product from transcript CG42818-RB
Synonyms	BG:DS07473.1,CG12455,DS07473.1A,Dmel\CG42818,Dmel_CG12455
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 35F1-35F1

mRNA and Protein(s)

mRNA	Protein	Name
NM_001201892.2	NP_001188821.1	uncharacterized protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG42818 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG42818 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa15680	NM_001201892.2 Latest version!	Drosophila melanogaster uncharacterized protein (CG42818), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG42818 ( NM_001201892.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001188821.1 Drosophila melanogaster uncharacterized protein (CG42818), mRNA.

Price & Availability↑

CloneID	OFa15680
Clone ID Related Accession (Same CDS sequence)	NM_001201892.2
Accession Version	NM_001201892.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3258bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jan 16, 2013 this sequence version replaced NM_001201892.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGTTTATCC ATCAAAGAGA GCAGCTTCCA TTTAAACATA ATGAGCAAGA TCCAAATTAT 
TTAGCCCCCG TCATTCAAAA AAGAAAACCT ATGGATAAGG ATCCACGAAA TCCACTGAAA 
CGACTTAAAT TTTTGCAGGA ATTTCCTACT CAATCATCAA AGGGGGATCT TGACGATTTA 
AAATATCCAA CACAGTTAGA AGGGCGCCAC GATTCACCCA AATATGATAA AACCTTTCAT 
ACCGAAATAC ATGCAAATAA TGAAACAGAT TCTCAAGAAT TGGAAAATAT AATTTTAGAA 
AAGAACTTGC AAGATTCTAA AACAGAATTC CAAGAAAATC GTGCATCGCA ACCAAAGAAT 
ATGCATTCGT TCCAAATTCC TGAAGCAATC GAATCTCATT TTAATAACAA AGAATTGCAG 
AATGAGAATG ATTTACATAA AGGACTGAAG CAACAATATC GATCTGGATC CGAACAGGAT 
AAGTCAGGAC CAGAGAATGT ACGCGAAATT GCATCCAAAC TGATCCTCCA GTGGGCGGAA 
AATCAGCGCA GTTTATTAGA TTCCTTCGTG AAGGCGATCA CCGACGTATT GAAAGTTCAT 
GATTCTAAGC TGAATATGAA AATAAATATC AGCCCTCGAG ATATAATGAT TTTAAAAGAT 
ATGCTCAAAC AATTACTTGA ATCAATAATG CAATTGAGAG AAGGTAGCAC CAGCACACGT 
GCTAGGATCG TATTAAACAA GTGGATAGAG ACCCAAAAAT CACTAATTGA TTCATTTTCC 
CAAGCTATTC AAAATACAAA TCAAAATGTG GACAACATTG CCAATGTATA TGAGGTCATG 
GAAAATTTAA ATAAAAACCT TAGGGAACTG GTAATTCTGC TAAGCGACAA GGAAAGTTTC 
CCAACAACAG AGAGTAGTAG TTCCCAACAA ACTACTAGCA TTTATGCAAC TACTACTTTC 
TATCTAACAT CAAGCACATT TGGCTCAACT CATCCTATTG TAGACGAAAA TATCAATCGT 
GTTAATATCA TGGGAAATTT GATAAAGGGA CTAAGAAATA TTATGGTTCA AATGGATGAA 
ACAAATAAAA CTTCAAGTTC TACTTCTTAT ACCACAACGG AAAGTACCTA TATTCAACCG 
AGTACATCCA CATATTTGAA CGCGGAGGTC ACTACTTCCC ATCCAACTAC AAGCACATAT 
GAAGTTACAA ATATAATAAC CGACGAAAGT AAAATTAAAG ACATGTTTAA TTTGATTAAA 
GGTATAGAAG ACCTAATTAG TCAATATAAT GGCAAACATA AATTTACAAG TACCACCAGT 
TTAACTGGGA AAAGCAATAG CCGAGAGCCA ACGATGACCA CTTATTCCTC AGCTGGTGGT 
ATTACATCCC ATTCCTTTAC AACCACTTCA CCGAAAACAG TGACTACTTC TTCTAGTCAT 
TCAACAACAG AGAGTTCGCC TAGTCATCCG ACAACAAGCA ACTATGAAGT CACTGTTTTT 
GATCAGGATA GCCATAAATT TAAGGTTATG AAAAATTTGA TCAAAGAACT TAAAGGACTG 
ATCGAACATT TCAGTGATAC AAAAAATATT ACGAGTACAA CCTATTCAAC AGGAGACAGC 
AAAAGTTTCC AGCCAACCGC TACGACTCCT GACTCTACAG ACAGATCTTC CTCCCAACCA 
ATTACATTCC CCGAGTCGAC AACATCGACG ACGAACTTAC AATCAACTAT TACTAACCAT 
TTGTCAACAG AGAGTACGAG TTCTCAGCTT AATACTACTC TTTCTATAAC AGGAACCACT 
ACTCCCAATC TAACTACAAG CACACATGAC TTTAAAGACC AGATTAATGA CGATGATTCT 
AAAAGTCTGA AACATTTAAT TAAGATACTT TCAGACCTGG TATATTCATT AAATGATAAG 
AATAATATAA AAAGTACCAG CCAGTTAACA ACAGAGAGCA CATTTAATAG TTCAATTAAC 
ATCACCAATT CAACGACTGT TGCCTCATCA ACTTTTTCAA CAACAGAGAG TATGGCCATC 
CATTCAACCC CTTATCTTTC AACAAGAGAA ATCACGGTTT TCCAATTTAA CGATGTAGAA 
AATATAAATC CAATTATATC CAACAATTCA ACAACTGTGA CCACTAATAT TCATTCTAGT 
ACATATACCA CATCAACAAC AGATAATACA ACATCCTATC CTAACCTTTC AACAACAGAG 
AGTTCCCCAA CGTTTGATTC GACCATATCT CACTCAAATA CATCTAGTCA AACAAGATCG 
CTTGGTTCAT ATAAAGACAA AATCAAAAAT ATTGTAGAAC TTTTAAAAAA ATTACGTAAG 
ATTCAGAAAA CTTTAGCCGA CAAGTCGAAG GGGCAACTTT CACCAATGCT TATATCGAGA 
ATAAAAGCTG TACTTAAGCA AATCGTCGCG GGTAATATTG ATTCAGTAAA CGGCGATTCA 
ACTGAGTTGG AAATACTTCT TTCCACAACA GTCAATCCCA ATGAAGATAC TACCGATTTG 
ACGATGGAAA AATTGTTAAA GCTATTCGAT GATTTTGAAA GGATGTATAA CGTATTGTTG 
GATGATAGTA TTCAGAGTAC TACACAATCC ACGACACAGA ACAACACAAT TTTTTCAACG 
ACATACAGTA CAATTTTTTC TACAACCCAA AGCATATCAA CAACTTCACC AACACAGTAT 
GCATTAACGA GTTCCACACC AAATACTTCA ACAACATCAC ATTCTTCTAC CCCATCCTCA 
ATAAATAATC TAAGGAGTGA TGAATCAAAC AATCACCAGC CAATTGTAGA CGCAATTCAG 
CAATTAAAGA TGGCATTATA TCATGACTTT TATGCTTTTA AAAAATCTCA AGAGGAAAGA 
ATGGAAAAAA TTCTTCAACT TCTTAATGGC AAACCAATAG ATCGGCGGAC AAAAACTATT 
GCTAAACCGA GAACCATACG AAAGAAAGTA AGCCGTGAGA TACAAAAAAG AAACAGCGAT 
GTTAAAGAGG ATAAAATACA CCACTACAAA GCAGACAAAT TTATAAAAAA CCCAAAAAAT 
GGAAATCAAG ATAGTCACAT CCCTAAACCG ATTTTAAATT CGGCAAGATC GAAAATAAAA 
GATGTCCCAT TAAAACTATC TGCTATTAAA GTAAATGGTG GACTAAAACA TTTGCCTTCA 
AAACGTAAAG CTAATGAAGA AGTATCTGCA ATGCATGAGA TTTTCCCGGA ACCCGTATCA 
ATACTGCCAC ATAAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001188821.1
CDS	143..3400
Translation	MFIHQREQLPFKHNEQDPNYLAPVIQKRKPMDKDPRNPLKRLKFLQEFPTQSSKGDLDDLKYPTQLEGRHDSPKYDKTFHTEIHANNETDSQELENIILEKNLQDSKTEFQENRASQPKNMHSFQIPEAIESHFNNKELQNENDLHKGLKQQYRSGSEQDKSGPENVREIASKLILQWAENQRSLLDSFVKAITDVLKVHDSKLNMKINISPRDIMILKDMLKQLLESIMQLREGSTSTRARIVLNKWIETQKSLIDSFSQAIQNTNQNVDNIANVYEVMENLNKNLRELVILLSDKESFPTTESSSSQQTTSIYATTTFYLTSSTFGSTHPIVDENINRVNIMGNLIKGLRNIMVQMDETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTTSHPTTSTYEVTNIITDESKIKDMFNLIKGIEDLISQYNGKHKFTSTTSLTGKSNSREPTMTTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIKELKGLIEHFSDTKNITSTTYSTGDSKSFQPTATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLSITGTTTPNLTTSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTPYLSTREITVFQFNDVENINPIISNNSTTVTTNIHSSTYTTSTTDNTTSYPNLSTTESSPTFDSTISHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQKTLADKSKGQLSPMLISRIKAVLKQIVAGNIDSVNGDSTELEILLSTTVNPNEDTTDLTMEKLLKLFDDFERMYNVLLDDSIQSTTQSTTQNNTIFSTTYSTIFSTTQSISTTSPTQYALTSSTPNTSTTSHSSTPSSINNLRSDESNNHQPIVDAIQQLKMALYHDFYAFKKSQEERMEKILQLLNGKPIDRRTKTIAKPRTIRKKVSREIQKRNSDVKEDKIHHYKADKFIKNPKNGNQDSHIPKPILNSARSKIKDVPLKLSAIKVNGGLKHLPSKRKANEEVSAMHEIFPEPVSILPHK

Target ORF information:

RefSeq Version	NM_001201892.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG42818), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001201892.2

ORF Insert Sequence:

ATGTTTATCC ATCAAAGAGA GCAGCTTCCA TTTAAACATA ATGAGCAAGA TCCAAATTAT 
TTAGCCCCCG TCATTCAAAA AAGAAAACCT ATGGATAAGG ATCCACGAAA TCCACTGAAA 
CGACTTAAAT TTTTGCAGGA ATTTCCTACT CAATCATCAA AGGGGGATCT TGACGATTTA 
AAATATCCAA CACAGTTAGA AGGGCGCCAC GATTCACCCA AATATGATAA AACCTTTCAT 
ACCGAAATAC ATGCAAATAA TGAAACAGAT TCTCAAGAAT TGGAAAATAT AATTTTAGAA 
AAGAACTTGC AAGATTCTAA AACAGAATTC CAAGAAAATC GTGCATCGCA ACCAAAGAAT 
ATGCATTCGT TCCAAATTCC TGAAGCAATC GAATCTCATT TTAATAACAA AGAATTGCAG 
AATGAGAATG ATTTACATAA AGGACTGAAG CAACAATATC GATCTGGATC CGAACAGGAT 
AAGTCAGGAC CAGAGAATGT ACGCGAAATT GCATCCAAAC TGATCCTCCA GTGGGCGGAA 
AATCAGCGCA GTTTATTAGA TTCCTTCGTG AAGGCGATCA CCGACGTATT GAAAGTTCAT 
GATTCTAAGC TGAATATGAA AATAAATATC AGCCCTCGAG ATATAATGAT TTTAAAAGAT 
ATGCTCAAAC AATTACTTGA ATCAATAATG CAATTGAGAG AAGGTAGCAC CAGCACACGT 
GCTAGGATCG TATTAAACAA GTGGATAGAG ACCCAAAAAT CACTAATTGA TTCATTTTCC 
CAAGCTATTC AAAATACAAA TCAAAATGTG GACAACATTG CCAATGTATA TGAGGTCATG 
GAAAATTTAA ATAAAAACCT TAGGGAACTG GTAATTCTGC TAAGCGACAA GGAAAGTTTC 
CCAACAACAG AGAGTAGTAG TTCCCAACAA ACTACTAGCA TTTATGCAAC TACTACTTTC 
TATCTAACAT CAAGCACATT TGGCTCAACT CATCCTATTG TAGACGAAAA TATCAATCGT 
GTTAATATCA TGGGAAATTT GATAAAGGGA CTAAGAAATA TTATGGTTCA AATGGATGAA 
ACAAATAAAA CTTCAAGTTC TACTTCTTAT ACCACAACGG AAAGTACCTA TATTCAACCG 
AGTACATCCA CATATTTGAA CGCGGAGGTC ACTACTTCCC ATCCAACTAC AAGCACATAT 
GAAGTTACAA ATATAATAAC CGACGAAAGT AAAATTAAAG ACATGTTTAA TTTGATTAAA 
GGTATAGAAG ACCTAATTAG TCAATATAAT GGCAAACATA AATTTACAAG TACCACCAGT 
TTAACTGGGA AAAGCAATAG CCGAGAGCCA ACGATGACCA CTTATTCCTC AGCTGGTGGT 
ATTACATCCC ATTCCTTTAC AACCACTTCA CCGAAAACAG TGACTACTTC TTCTAGTCAT 
TCAACAACAG AGAGTTCGCC TAGTCATCCG ACAACAAGCA ACTATGAAGT CACTGTTTTT 
GATCAGGATA GCCATAAATT TAAGGTTATG AAAAATTTGA TCAAAGAACT TAAAGGACTG 
ATCGAACATT TCAGTGATAC AAAAAATATT ACGAGTACAA CCTATTCAAC AGGAGACAGC 
AAAAGTTTCC AGCCAACCGC TACGACTCCT GACTCTACAG ACAGATCTTC CTCCCAACCA 
ATTACATTCC CCGAGTCGAC AACATCGACG ACGAACTTAC AATCAACTAT TACTAACCAT 
TTGTCAACAG AGAGTACGAG TTCTCAGCTT AATACTACTC TTTCTATAAC AGGAACCACT 
ACTCCCAATC TAACTACAAG CACACATGAC TTTAAAGACC AGATTAATGA CGATGATTCT 
AAAAGTCTGA AACATTTAAT TAAGATACTT TCAGACCTGG TATATTCATT AAATGATAAG 
AATAATATAA AAAGTACCAG CCAGTTAACA ACAGAGAGCA CATTTAATAG TTCAATTAAC 
ATCACCAATT CAACGACTGT TGCCTCATCA ACTTTTTCAA CAACAGAGAG TATGGCCATC 
CATTCAACCC CTTATCTTTC AACAAGAGAA ATCACGGTTT TCCAATTTAA CGATGTAGAA 
AATATAAATC CAATTATATC CAACAATTCA ACAACTGTGA CCACTAATAT TCATTCTAGT 
ACATATACCA CATCAACAAC AGATAATACA ACATCCTATC CTAACCTTTC AACAACAGAG 
AGTTCCCCAA CGTTTGATTC GACCATATCT CACTCAAATA CATCTAGTCA AACAAGATCG 
CTTGGTTCAT ATAAAGACAA AATCAAAAAT ATTGTAGAAC TTTTAAAAAA ATTACGTAAG 
ATTCAGAAAA CTTTAGCCGA CAAGTCGAAG GGGCAACTTT CACCAATGCT TATATCGAGA 
ATAAAAGCTG TACTTAAGCA AATCGTCGCG GGTAATATTG ATTCAGTAAA CGGCGATTCA 
ACTGAGTTGG AAATACTTCT TTCCACAACA GTCAATCCCA ATGAAGATAC TACCGATTTG 
ACGATGGAAA AATTGTTAAA GCTATTCGAT GATTTTGAAA GGATGTATAA CGTATTGTTG 
GATGATAGTA TTCAGAGTAC TACACAATCC ACGACACAGA ACAACACAAT TTTTTCAACG 
ACATACAGTA CAATTTTTTC TACAACCCAA AGCATATCAA CAACTTCACC AACACAGTAT 
GCATTAACGA GTTCCACACC AAATACTTCA ACAACATCAC ATTCTTCTAC CCCATCCTCA 
ATAAATAATC TAAGGAGTGA TGAATCAAAC AATCACCAGC CAATTGTAGA CGCAATTCAG 
CAATTAAAGA TGGCATTATA TCATGACTTT TATGCTTTTA AAAAATCTCA AGAGGAAAGA 
ATGGAAAAAA TTCTTCAACT TCTTAATGGC AAACCAATAG ATCGGCGGAC AAAAACTATT 
GCTAAACCGA GAACCATACG AAAGAAAGTA AGCCGTGAGA TACAAAAAAG AAACAGCGAT 
GTTAAAGAGG ATAAAATACA CCACTACAAA GCAGACAAAT TTATAAAAAA CCCAAAAAAT 
GGAAATCAAG ATAGTCACAT CCCTAAACCG ATTTTAAATT CGGCAAGATC GAAAATAAAA 
GATGTCCCAT TAAAACTATC TGCTATTAAA GTAAATGGTG GACTAAAACA TTTGCCTTCA 
AAACGTAAAG CTAATGAAGA AGTATCTGCA ATGCATGAGA TTTTCCCGGA ACCCGTATCA 
ATACTGCCAC ATAAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG42818 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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