Pkp1 cDNA ORF clone, Dipodomys ordii(Ord's kangaroo rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Pkp1
Entrez Gene ID	105986479
Full Name	plakophilin 1
Gene Type	protein-coding
Organism	Dipodomys ordii(Ord's kangaroo rat)

mRNA and Protein(s)

mRNA	Protein	Name
XM_013017399.1	XP_012872853.1	plakophilin-1

Pathways from BioSystems
Gene Ontology

The following Pkp1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Pkp1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODi141915	XM_013017399.1 Latest version!	Dipodomys ordii plakophilin 1 (Pkp1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Pkp1 ( XM_013017399.1 ) cDNA ORF clone, Dipodomys ordii(Ord's kangaroo rat) -> XP_012872853.1 Dipodomys ordii plakophilin 1 (Pkp1), mRNA.

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CloneID	ODi141915
Clone ID Related Accession (Same CDS sequence)	XM_013017399.1
Accession Version	XM_013017399.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2184bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-06-25
Organism	Dipodomys ordii(Ord's kangaroo rat)
Product	plakophilin-1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012267251.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Dipodomys ordii Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAACCACG CGCCGCTCAA GACCGCCCTG GCGTACGAAT GCTTCCAGGA CCAGGACAAC 
TCCACCCTGG CGCTGCCGTC CGATCAGAAG ATGAAGACGG GCACGTCGGG CCGGCAGCGC 
GTGCAGGAGC AAGTGATGAT GACCGTCAAG CGCCAGAAGT CCAAGTCTTC CCAGTCATCC 
ACCCTGAGCC ACTCCAACCG AGGTTCTATG TATGATGGCT TGGCTGACAA TTACAACAAC 
TATGGGACCA CCAGCAGGAG CAGCTACTAC TCCAAGTTCC AAGCAGGAAA TGGTTCATGG 
GGATATCCGA TCTACAACGG AACCCTCAAA AGGGAGCCTG ACAACAGGCG CTTCAGCTCC 
TACAGCCAGA CGGAGAACTG GAGCCGGCAA TATCCCCGGG GAAGCTGCGC TACCACCGGT 
GCGGGCAGCG ACATCTGCTT CATGCAGAAA ATCAAGGCCA GCCGCAGCGA GCCTGACCTC 
TACTGCGACC CGAGGGGCAC CTTGCGTAAG GGCACACTGG GCAGTAAGGG CCACAAAACC 
ACCCAGAACC GCTATAGCTT TTACAGTACC TGCAGTGGTC AGAAGGCTGT CAAGAAGTGC 
CCTGTGCGCC CGCCCTCTTG TACCTCCAAG CAGGACCCGG TGTATGGGCC ACCCATCTCC 
TGCAACAAGG ACCTGTCCTT CGGCCACTCG AGGGCCAGCT CTAAGATTTG CAGTGAGGAC 
ATCGAGTGCA GTGGGCTGAC CATCCCCAAG GCCGTGCAGT ACCTTACCTC CCAGGATGAG 
AAGTACCAGG CCATTGGAGC CTATTACATC CAGCATACCT GCTTCCAGGA TGAATCTGCC 
AAACAGCAGG TATATCAGCT GGGAGGCATC TGCAAGCTGG TGGATCTCCT CCGCAGCCCC 
AACCAGAATG TGCAGCAGGC TGCCGCCGGG GCCCTGCGCA ACCTGGTGTT CAGGAGTACC 
ACCAATAAGC TGGAGACCCG GAGGCAGAAC GGGATCCGTG AGGCCGTCAA CCTCCTAAGG 
AGAACCGGGA GTACTGAGAT CCAGAAACAA CTAACCGGGC TGCTCTGGAA CCTGTCTTCT 
ACTGATGAGC TGAAGGAAGA GCTGGTGTCC GATGCCCTGC CTGTTCTGAC CGACCGGGTC 
ATCATTCCCT TCTCTGGCTG GTGTGATGGC AACAGCAACA TGTCCCGCGA AATGGTGGAT 
CCTGAGGTCT TCTTCAATGC CACAGGCTGC CTGAGGAACC TGAGCTCTGC TGATGCAGGC 
CGCCAGACCA TGCGGAACTA CTCAGGGCTC ATCGACTCCC TCGTGGCCTA TGTCCAGAAC 
TGTGTGGCAG CCAGCCGCTG TGATGACAAG TCTGTGGAGA ACTGCATGTG TATCCTGCAC 
AACCTCTCTT ACCGCCTGGA TGCCGAGGTC CCCACCCGCT ACCGCCAGCT TGAGTACACC 
GCCCGCAATG CCTACACCGA GAAGTCCTCC ACTGGCTGCT TTAGCAACAG GGGCGACAAG 
ATGATGAACA ACAACTATGA CTGCCCCCTT CCTGAGGAAG AGACCAACCC CAAGGGCAGC 
AGCTGGCTCT ACCACTCAGA TGCCATCCGC ACCTACCTGA ACCTCATGGG CAAAAGCAAG 
AAAGATGCCA CCCTGGAAGC CTGCGCGGGT GCCCTGCAGA ACCTGACGGC CAGCAAGGGA 
CTGATGTCCA GTGGCATGAG CCAGCTGATT GGACTGAAGG AAAAAGGCCT GCCACAAATT 
GCCCGCCTTC TGCAATCTGG CAACTCTGAT GTGGTGCGAT CTGGGGCCTC CCTCCTGAGC 
AACATGTCCC GCCATCCTGT GCTGCACAGA GCGATGGGGA ACCAGGTGTT CCCAGAGGTG 
ACCAGGCTCC TCACCACCCA CACCGGCAAC ACCAGCAACT CGGAAGACAT TTTGTCCTCC 
GCCTGCTACA CCGTGAGGAA CTTGATGGCC TCCCAGCCCC AGATGGCTAA GCAGTACTTC 
TCCAGCAACA TGCTCAACAA TGTTGTCAAC CTGTGCCGCA GCAGTGCCTC ACCCAAGGCG 
GCAGAGGCTG CGCGGCTCCT CCTGTCAGAT ATGTGGTCCA GCAAGGAGCT GCAGGGTGTT 
CTCAGACAGC AAGGCTTTGA CAGGAATATG CTAGGAAGCC TGGCCGGAGC CAACAACTTT 
AGGAACTTTA CCTCCCGGTT CTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012872853.1
CDS	256..2439
Translation	MNHAPLKTALAYECFQDQDNSTLALPSDQKMKTGTSGRQRVQEQVMMTVKRQKSKSSQSSTLSHSNRGSMYDGLADNYNNYGTTSRSSYYSKFQAGNGSWGYPIYNGTLKREPDNRRFSSYSQTENWSRQYPRGSCATTGAGSDICFMQKIKASRSEPDLYCDPRGTLRKGTLGSKGHKTTQNRYSFYSTCSGQKAVKKCPVRPPSCTSKQDPVYGPPISCNKDLSFGHSRASSKICSEDIECSGLTIPKAVQYLTSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVNLLRRTGSTEIQKQLTGLLWNLSSTDELKEELVSDALPVLTDRVIIPFSGWCDGNSNMSREMVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLVAYVQNCVAASRCDDKSVENCMCILHNLSYRLDAEVPTRYRQLEYTARNAYTEKSSTGCFSNRGDKMMNNNYDCPLPEEETNPKGSSWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPVLHRAMGNQVFPEVTRLLTTHTGNTSNSEDILSSACYTVRNLMASQPQMAKQYFSSNMLNNVVNLCRSSASPKAAEAARLLLSDMWSSKELQGVLRQQGFDRNMLGSLAGANNFRNFTSRF

Target ORF information:

RefSeq Version	XM_013017399.1
Organism	Dipodomys ordii(Ord's kangaroo rat)
Definition	Dipodomys ordii plakophilin 1 (Pkp1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_013017399.1

ORF Insert Sequence:

ATGAACCACG CGCCGCTCAA GACCGCCCTG GCGTACGAAT GCTTCCAGGA CCAGGACAAC 
TCCACCCTGG CGCTGCCGTC CGATCAGAAG ATGAAGACGG GCACGTCGGG CCGGCAGCGC 
GTGCAGGAGC AAGTGATGAT GACCGTCAAG CGCCAGAAGT CCAAGTCTTC CCAGTCATCC 
ACCCTGAGCC ACTCCAACCG AGGTTCTATG TATGATGGCT TGGCTGACAA TTACAACAAC 
TATGGGACCA CCAGCAGGAG CAGCTACTAC TCCAAGTTCC AAGCAGGAAA TGGTTCATGG 
GGATATCCGA TCTACAACGG AACCCTCAAA AGGGAGCCTG ACAACAGGCG CTTCAGCTCC 
TACAGCCAGA CGGAGAACTG GAGCCGGCAA TATCCCCGGG GAAGCTGCGC TACCACCGGT 
GCGGGCAGCG ACATCTGCTT CATGCAGAAA ATCAAGGCCA GCCGCAGCGA GCCTGACCTC 
TACTGCGACC CGAGGGGCAC CTTGCGTAAG GGCACACTGG GCAGTAAGGG CCACAAAACC 
ACCCAGAACC GCTATAGCTT TTACAGTACC TGCAGTGGTC AGAAGGCTGT CAAGAAGTGC 
CCTGTGCGCC CGCCCTCTTG TACCTCCAAG CAGGACCCGG TGTATGGGCC ACCCATCTCC 
TGCAACAAGG ACCTGTCCTT CGGCCACTCG AGGGCCAGCT CTAAGATTTG CAGTGAGGAC 
ATCGAGTGCA GTGGGCTGAC CATCCCCAAG GCCGTGCAGT ACCTTACCTC CCAGGATGAG 
AAGTACCAGG CCATTGGAGC CTATTACATC CAGCATACCT GCTTCCAGGA TGAATCTGCC 
AAACAGCAGG TATATCAGCT GGGAGGCATC TGCAAGCTGG TGGATCTCCT CCGCAGCCCC 
AACCAGAATG TGCAGCAGGC TGCCGCCGGG GCCCTGCGCA ACCTGGTGTT CAGGAGTACC 
ACCAATAAGC TGGAGACCCG GAGGCAGAAC GGGATCCGTG AGGCCGTCAA CCTCCTAAGG 
AGAACCGGGA GTACTGAGAT CCAGAAACAA CTAACCGGGC TGCTCTGGAA CCTGTCTTCT 
ACTGATGAGC TGAAGGAAGA GCTGGTGTCC GATGCCCTGC CTGTTCTGAC CGACCGGGTC 
ATCATTCCCT TCTCTGGCTG GTGTGATGGC AACAGCAACA TGTCCCGCGA AATGGTGGAT 
CCTGAGGTCT TCTTCAATGC CACAGGCTGC CTGAGGAACC TGAGCTCTGC TGATGCAGGC 
CGCCAGACCA TGCGGAACTA CTCAGGGCTC ATCGACTCCC TCGTGGCCTA TGTCCAGAAC 
TGTGTGGCAG CCAGCCGCTG TGATGACAAG TCTGTGGAGA ACTGCATGTG TATCCTGCAC 
AACCTCTCTT ACCGCCTGGA TGCCGAGGTC CCCACCCGCT ACCGCCAGCT TGAGTACACC 
GCCCGCAATG CCTACACCGA GAAGTCCTCC ACTGGCTGCT TTAGCAACAG GGGCGACAAG 
ATGATGAACA ACAACTATGA CTGCCCCCTT CCTGAGGAAG AGACCAACCC CAAGGGCAGC 
AGCTGGCTCT ACCACTCAGA TGCCATCCGC ACCTACCTGA ACCTCATGGG CAAAAGCAAG 
AAAGATGCCA CCCTGGAAGC CTGCGCGGGT GCCCTGCAGA ACCTGACGGC CAGCAAGGGA 
CTGATGTCCA GTGGCATGAG CCAGCTGATT GGACTGAAGG AAAAAGGCCT GCCACAAATT 
GCCCGCCTTC TGCAATCTGG CAACTCTGAT GTGGTGCGAT CTGGGGCCTC CCTCCTGAGC 
AACATGTCCC GCCATCCTGT GCTGCACAGA GCGATGGGGA ACCAGGTGTT CCCAGAGGTG 
ACCAGGCTCC TCACCACCCA CACCGGCAAC ACCAGCAACT CGGAAGACAT TTTGTCCTCC 
GCCTGCTACA CCGTGAGGAA CTTGATGGCC TCCCAGCCCC AGATGGCTAA GCAGTACTTC 
TCCAGCAACA TGCTCAACAA TGTTGTCAAC CTGTGCCGCA GCAGTGCCTC ACCCAAGGCG 
GCAGAGGCTG CGCGGCTCCT CCTGTCAGAT ATGTGGTCCA GCAAGGAGCT GCAGGGTGTT 
CTCAGACAGC AAGGCTTTGA CAGGAATATG CTAGGAAGCC TGGCCGGAGC CAACAACTTT 
AGGAACTTTA CCTCCCGGTT CTAA